Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4280
Gene name
LocationContig_395:12812..13658
Strand-
Gene length (bp)846
Transcript length (bp)717
Coding sequence length (bp)717
Protein length (aa) 239

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05241 EBP EXPERA (EXPanded EBP superfamily) 5.2E-20 111 220

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9D0P0|EBPL_MOUSE Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1 46 237 2.0E-33
sp|Q9BY08|EBPL_HUMAN Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1 46 236 7.0E-30
sp|Q9FTZ2|EBP_ORYSJ Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1 46 237 2.0E-11
sp|Q60490|EBP_CAVPO 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 23 214 2.0E-10
sp|Q15125|EBP_HUMAN 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3 22 228 7.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9D0P0|EBPL_MOUSE Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1 46 237 2.0E-33
sp|Q9BY08|EBPL_HUMAN Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1 46 236 7.0E-30
sp|Q9FTZ2|EBP_ORYSJ Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1 46 237 2.0E-11
sp|Q60490|EBP_CAVPO 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 23 214 2.0E-10
sp|Q15125|EBP_HUMAN 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3 22 228 7.0E-10
sp|P70245|EBP_MOUSE 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3 6 214 1.0E-09
sp|O48962|EBP_ARATH Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1 46 214 1.0E-09
sp|Q9JJ46|EBP_RAT 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3 6 214 3.0E-07
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 160 182 22
3 197 219 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4280
MDAPTAPPDLFDRTTLLSLLSTAALALTAYLASRRFVPVPAPAPLRFLFAWHAGDALCHFLLEGSFLYHCFFSST
SSSSVAAPSSFPTPYNFLGYTDGRLVGPQAGGGNPFALLWMVYARADRRWAGADLGVVSLELLTVFVDGPLACYV
CYLIAKGDAAASFWMVVLATCELYGGFMTFCPEWLTGNVNLDGSNFMYMWVYLVFFNMLWVVIPLYAMWYSFGDI
SHAFAARAAKKRI*
Coding >Ophun1|4280
ATGGACGCCCCCACCGCCCCCCCAGACCTCTTCGACCGCACGACGCTCCTCTCCCTGCTCAGCACGGCAGCCCTG
GCGCTGACAGCGTACCTGGCCTCCCGACGCTTCGTCCCCGTCCCCGCCCCGGCCCCGCTGCGGTTCCTGTTCGCG
TGGCACGCCGGCGACGCGCTGTGCCATTTTCTGCTGGAGGGGAGCTTCCTATACCACTGCTTCTTCTCGTCGACG
TCTTCCTCGTCTGTGGCCGCGCCGTCATCGTTCCCCACGCCCTACAACTTCCTCGGCTACACCGACGGCAGGCTC
GTGGGCCCGCAGGCGGGGGGCGGCAATCCGTTTGCGCTGCTGTGGATGGTGTATGCGCGGGCGGACAGGAGGTGG
GCTGGTGCTGACCTGGGCGTCGTTAGCTTGGAGCTTTTGACTGTCTTTGTCGATGGGCCGCTTGCGTGTTACGTC
TGCTACCTCATTGCCAAGGGGGATGCTGCGGCCAGCTTCTGGATGGTGGTGCTGGCGACGTGCGAGCTCTATGGC
GGCTTCATGACGTTTTGCCCGGAGTGGTTAACTGGAAACGTCAATCTCGATGGGAGCAACTTCATGTACATGTGG
GTTTACTTGGTCTTCTTCAATATGCTTTGGGTGGTGATTCCTCTGTATGCTATGTGGTACTCGTTTGGGGATATT
TCCCATGCGTTTGCGGCGAGGGCAGCCAAGAAACGCATCTAG
Transcript >Ophun1|4280
ATGGACGCCCCCACCGCCCCCCCAGACCTCTTCGACCGCACGACGCTCCTCTCCCTGCTCAGCACGGCAGCCCTG
GCGCTGACAGCGTACCTGGCCTCCCGACGCTTCGTCCCCGTCCCCGCCCCGGCCCCGCTGCGGTTCCTGTTCGCG
TGGCACGCCGGCGACGCGCTGTGCCATTTTCTGCTGGAGGGGAGCTTCCTATACCACTGCTTCTTCTCGTCGACG
TCTTCCTCGTCTGTGGCCGCGCCGTCATCGTTCCCCACGCCCTACAACTTCCTCGGCTACACCGACGGCAGGCTC
GTGGGCCCGCAGGCGGGGGGCGGCAATCCGTTTGCGCTGCTGTGGATGGTGTATGCGCGGGCGGACAGGAGGTGG
GCTGGTGCTGACCTGGGCGTCGTTAGCTTGGAGCTTTTGACTGTCTTTGTCGATGGGCCGCTTGCGTGTTACGTC
TGCTACCTCATTGCCAAGGGGGATGCTGCGGCCAGCTTCTGGATGGTGGTGCTGGCGACGTGCGAGCTCTATGGC
GGCTTCATGACGTTTTGCCCGGAGTGGTTAACTGGAAACGTCAATCTCGATGGGAGCAACTTCATGTACATGTGG
GTTTACTTGGTCTTCTTCAATATGCTTTGGGTGGTGATTCCTCTGTATGCTATGTGGTACTCGTTTGGGGATATT
TCCCATGCGTTTGCGGCGAGGGCAGCCAAGAAACGCATCTAG
Gene >Ophun1|4280
ATGGACGCCCCCACCGCCCCCCCAGACCTCTTCGACCGCACGACGCTCCTCTCCCTGCTCAGCACGGCAGCCCTG
GCGCTGACAGCGTACCTGGCCTCCCGACGCTTCGTCCCCGTCCCCGCCCCGGCCCCGCTGCGGTTCCTGTTCGCG
TGGCACGCCGGCGACGCGCTGTGCCATTTTCTGCTGGAGGGGAGCTTCCTATACCACTGCTTCTTCTCGTCGACG
TCTTCCTCGTCTGTGGCCGCGCCGTCATCGTTCCCCACGCCCTACAACTTCCTCGGCTACACCGACGGCAGGCTC
GTGGGCCCGCAGGCGGGGGGCGGCAATCCGTTTGCGCTGCTGTGGATGGTGTATGCGCGGGCGGACAGGAGGTGG
GCTGGTGCTGACCTGGTGCGTTCTTTTCTCCCCCCCTTGGCCCTTGGGGGAGTCTTGCTCGGTGGGTGCTGATGG
GAGGCATGGGGATATGCTAGGGCGTCGTTAGCTTGGAGCTTTTGACTGTCTTTGTCGATGGGCCGCTTGCGTGTT
ACGTCTGCTACCTCATTGCCAAGGGGGATGCTGCGGCCAGCTTCTGGATGGTGGTGCTGGCGACGTGCGAGCTCT
ATGGCGGTAGGTGGGCTGTCGTGGGGGTGCGCTGCGGATTGCTGACTTGAGCTAGGCTTCATGACGTTTTGCCCG
GAGTGGTTAACTGGAAACGTCAATCTCGATGGGAGCAACTTCATGTACATGTGGGTTTACTTGGTCTTCTTCAAT
ATGCTTTGGGTGGTGATTCCTCTGTATGCTATGTGGTACTCGTTTGGGGATATTTCCCATGCGTTTGCGGCGAGG
GCAGCCAAGAAACGCATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail