Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|428
Gene name
LocationContig_112:10325..10951
Strand+
Gene length (bp)626
Transcript length (bp)564
Coding sequence length (bp)564
Protein length (aa) 188

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 117 139 22
2 154 176 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|428
MMTSVSYAEVAASGPRQSSQEAAAPQPPEIIPNESASTASLIDVDMPSVHTVRSDFLEQDVKTTTQAERRDREDE
ARKAAKARSARPSSSSASSSSASVRGRADAWLTGYFADLSDGSAGALAVANLAAVVGLSSYLGYKAWGLYDRGAL
DWKAAGLGVGILAAVGAVESVVGGYLYKGKAKKGSSS*
Coding >Ophun1|428
ATGATGACCTCAGTGTCCTACGCCGAAGTCGCAGCCAGCGGGCCACGGCAATCCTCTCAAGAGGCTGCCGCTCCT
CAGCCGCCAGAGATTATCCCCAACGAGAGCGCCTCGACAGCTTCCCTCATCGACGTCGACATGCCCAGCGTCCAC
ACCGTCCGCTCCGATTTCCTAGAACAGGACGTCAAGACGACGACGCAAGCCGAGCGCCGCGACCGCGAAGATGAA
GCCCGCAAGGCCGCCAAGGCTCGGTCCGCTCGCCCTTCGTCCTCGTCCGCCTCGTCGTCGTCGGCCTCGGTGCGC
GGTAGGGCAGATGCCTGGCTGACGGGCTACTTCGCCGACTTGTCTGACGGGAGTGCCGGCGCCCTTGCCGTCGCG
AATCTCGCTGCTGTCGTCGGTCTTAGCTCTTACCTCGGCTACAAGGCTTGGGGCCTGTATGATCGAGGCGCGTTG
GATTGGAAGGCTGCTGGATTGGGTGTGGGCATCTTGGCTGCTGTTGGTGCTGTCGAGTCTGTTGTCGGTGGTTAC
TTGTACAAGGGCAAGGCGAAGAAAGGGTCGTCGTCGTAG
Transcript >Ophun1|428
ATGATGACCTCAGTGTCCTACGCCGAAGTCGCAGCCAGCGGGCCACGGCAATCCTCTCAAGAGGCTGCCGCTCCT
CAGCCGCCAGAGATTATCCCCAACGAGAGCGCCTCGACAGCTTCCCTCATCGACGTCGACATGCCCAGCGTCCAC
ACCGTCCGCTCCGATTTCCTAGAACAGGACGTCAAGACGACGACGCAAGCCGAGCGCCGCGACCGCGAAGATGAA
GCCCGCAAGGCCGCCAAGGCTCGGTCCGCTCGCCCTTCGTCCTCGTCCGCCTCGTCGTCGTCGGCCTCGGTGCGC
GGTAGGGCAGATGCCTGGCTGACGGGCTACTTCGCCGACTTGTCTGACGGGAGTGCCGGCGCCCTTGCCGTCGCG
AATCTCGCTGCTGTCGTCGGTCTTAGCTCTTACCTCGGCTACAAGGCTTGGGGCCTGTATGATCGAGGCGCGTTG
GATTGGAAGGCTGCTGGATTGGGTGTGGGCATCTTGGCTGCTGTTGGTGCTGTCGAGTCTGTTGTCGGTGGTTAC
TTGTACAAGGGCAAGGCGAAGAAAGGGTCGTCGTCGTAG
Gene >Ophun1|428
ATGATGACCTCAGTGTCCTACGCCGAAGTCGCAGCCAGCGGGCCACGGCAATCCTCTCAAGAGGTGAGTTTCCCA
GCTTTTCTCCGGGCCCTGGCAGTCATCCGCTGACGACGACGATGGGAAAGGCTGCCGCTCCTCAGCCGCCAGAGA
TTATCCCCAACGAGAGCGCCTCGACAGCTTCCCTCATCGACGTCGACATGCCCAGCGTCCACACCGTCCGCTCCG
ATTTCCTAGAACAGGACGTCAAGACGACGACGCAAGCCGAGCGCCGCGACCGCGAAGATGAAGCCCGCAAGGCCG
CCAAGGCTCGGTCCGCTCGCCCTTCGTCCTCGTCCGCCTCGTCGTCGTCGGCCTCGGTGCGCGGTAGGGCAGATG
CCTGGCTGACGGGCTACTTCGCCGACTTGTCTGACGGGAGTGCCGGCGCCCTTGCCGTCGCGAATCTCGCTGCTG
TCGTCGGTCTTAGCTCTTACCTCGGCTACAAGGCTTGGGGCCTGTATGATCGAGGCGCGTTGGATTGGAAGGCTG
CTGGATTGGGTGTGGGCATCTTGGCTGCTGTTGGTGCTGTCGAGTCTGTTGTCGGTGGTTACTTGTACAAGGGCA
AGGCGAAGAAAGGGTCGTCGTCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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