© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|4263 |
| Gene name | |
| Location | Contig_393:13428..15025 |
| Strand | + |
| Gene length (bp) | 1597 |
| Transcript length (bp) | 1476 |
| Coding sequence length (bp) | 1476 |
| Protein length (aa) | 492 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02076 | STE3 | Pheromone A receptor | 5.7E-65 | 40 | 331 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P06783|STE3_YEAST | Pheromone a factor receptor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE3 PE=1 SV=1 | 38 | 381 | 1.0E-16 |
| sp|P31397|MAP3_SCHPO | Pheromone M-factor receptor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=map3 PE=2 SV=1 | 93 | 413 | 6.0E-09 |
| sp|P56502|BAR3_SCHCM | Pheromone B alpha 3 receptor OS=Schizophyllum commune (strain H4-8 / FGSC 9210) GN=BAR3 PE=3 SV=2 | 39 | 331 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0004932 | mating-type factor pheromone receptor activity | Yes |
| GO:0060089 | molecular transducer activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0009987 | cellular process | No |
| GO:0008528 | G protein-coupled peptide receptor activity | No |
| GO:0007165 | signal transduction | No |
| GO:0016503 | pheromone receptor activity | No |
| GO:0004888 | transmembrane signaling receptor activity | No |
| GO:0001653 | peptide receptor activity | No |
| GO:0004930 | G protein-coupled receptor activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0008150 | biological_process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0038023 | signaling receptor activity | No |
| GO:0065007 | biological regulation | No |
| GO:0050789 | regulation of biological process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 34 | 56 | 22 |
| 2 | 61 | 83 | 22 |
| 3 | 103 | 125 | 22 |
| 4 | 145 | 167 | 22 |
| 5 | 191 | 213 | 22 |
| 6 | 243 | 265 | 22 |
| 7 | 299 | 321 | 22 |
| 8 | 328 | 347 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|4263 MDPSSEPGIHLLSGNQTAVVGPQPSAMASLTHNLILRVTLALVANAVCLVPLRVLRRNGEFAAAVCVISVELLNF ESILCALIWRDDDVASWWPGYGLCDIIIHLHNAVTALFISCLLAIMRNLYQQVGLARAGPLHRSERRRRNLVQAL IIFPLPLLNLALTLIVAERRYVIGTLMGCTWAPHSSWPNLAFFVFPPVVLSVVTVIYAALTYFRFREIAKTTRTA LSNNPRASRRSQRTRRRLYLMVTAIMVPTLPLVVAVAVANVLQKSGGEHFDFYAVHNQAEPPWSVILFLPSSEIL WINLNNCYINVLVAIPIFGFFGTTKDAINEYRLVALSVGLGYLFPALRREYDPDRMPCSATSTGTSGPALTVQSF SSSPFSKKPRRLALFRSVSSSRDVERDNEPFEEDVAIYPSQTRQDTSVTDPARHRNPFLFRTRLNFRLPIRTAQH SEFVLRPLPPAAHIDDATSAESSEFGAVCGGNMPPQRNTAN* |
| Coding | >Ophun1|4263 ATGGATCCCTCGTCGGAGCCGGGGATTCACCTCCTGAGCGGAAACCAGACCGCCGTCGTCGGCCCACAGCCGTCT GCAATGGCCTCTCTCACTCACAACCTGATTCTACGCGTGACGCTGGCGCTGGTCGCCAACGCCGTGTGCCTTGTA CCGCTGCGAGTTCTCCGTCGAAACGGCGAGTTTGCTGCGGCCGTCTGCGTCATCTCGGTCGAGCTGCTCAATTTC GAATCCATTCTCTGCGCGCTCATCTGGCGTGACGATGATGTTGCTTCCTGGTGGCCCGGCTATGGCCTCTGCGAC ATCATCATCCACTTGCACAACGCCGTCACGGCCCTCTTCATCAGCTGTCTCCTCGCCATTATGCGGAATCTTTAC CAGCAGGTCGGTCTCGCGCGGGCCGGGCCTCTTCATCGCAGCGAGAGACGGCGCCGCAACCTCGTGCAGGCCCTC ATCATCTTTCCCCTGCCTCTACTCAATCTGGCCCTAACATTGATCGTCGCTGAACGACGCTATGTCATTGGCACT CTCATGGGCTGTACCTGGGCACCGCATTCGTCCTGGCCTAACTTGGCCTTTTTTGTCTTTCCCCCGGTCGTCCTA TCGGTCGTTACCGTTATCTACGCAGCTCTCACGTACTTTCGCTTCCGCGAAATCGCCAAGACGACCCGGACGGCA CTTTCCAACAACCCCAGAGCGAGTCGACGCAGCCAGCGAACCAGGCGTCGGCTTTATCTGATGGTCACGGCCATC ATGGTGCCTACGTTGCCTCTAGTTGTCGCCGTGGCCGTCGCAAACGTGTTGCAAAAGTCCGGCGGAGAACACTTT GATTTTTACGCCGTCCATAACCAGGCTGAGCCGCCCTGGTCCGTCATTCTCTTCCTTCCGTCGTCGGAGATTCTG TGGATCAACTTGAACAACTGCTACATCAATGTCCTCGTCGCCATTCCCATCTTCGGTTTCTTCGGCACCACCAAG GACGCCATTAACGAGTACCGACTCGTTGCCTTGTCGGTTGGCCTTGGCTACCTCTTCCCCGCTCTTCGACGAGAG TACGATCCGGACAGGATGCCTTGCTCGGCAACATCGACAGGGACAAGCGGCCCAGCTTTGACTGTTCAAAGCTTC TCCTCTTCACCGTTTTCAAAGAAGCCTCGCCGCCTCGCTCTCTTTCGATCCGTCTCTTCCTCTCGTGATGTGGAA CGCGACAACGAACCTTTTGAGGAAGACGTCGCCATATATCCCTCACAGACACGGCAGGATACTTCTGTGACGGAT CCCGCCCGTCATCGCAACCCCTTTCTCTTCCGCACTCGTCTCAACTTCCGCCTGCCAATTCGAACCGCGCAGCAC AGCGAGTTTGTTCTTCGACCTCTCCCACCCGCGGCCCATATCGACGACGCGACTTCAGCAGAGAGCTCCGAGTTT GGGGCTGTTTGCGGTGGCAACATGCCGCCTCAACGCAACACGGCCAATTGA |
| Transcript | >Ophun1|4263 ATGGATCCCTCGTCGGAGCCGGGGATTCACCTCCTGAGCGGAAACCAGACCGCCGTCGTCGGCCCACAGCCGTCT GCAATGGCCTCTCTCACTCACAACCTGATTCTACGCGTGACGCTGGCGCTGGTCGCCAACGCCGTGTGCCTTGTA CCGCTGCGAGTTCTCCGTCGAAACGGCGAGTTTGCTGCGGCCGTCTGCGTCATCTCGGTCGAGCTGCTCAATTTC GAATCCATTCTCTGCGCGCTCATCTGGCGTGACGATGATGTTGCTTCCTGGTGGCCCGGCTATGGCCTCTGCGAC ATCATCATCCACTTGCACAACGCCGTCACGGCCCTCTTCATCAGCTGTCTCCTCGCCATTATGCGGAATCTTTAC CAGCAGGTCGGTCTCGCGCGGGCCGGGCCTCTTCATCGCAGCGAGAGACGGCGCCGCAACCTCGTGCAGGCCCTC ATCATCTTTCCCCTGCCTCTACTCAATCTGGCCCTAACATTGATCGTCGCTGAACGACGCTATGTCATTGGCACT CTCATGGGCTGTACCTGGGCACCGCATTCGTCCTGGCCTAACTTGGCCTTTTTTGTCTTTCCCCCGGTCGTCCTA TCGGTCGTTACCGTTATCTACGCAGCTCTCACGTACTTTCGCTTCCGCGAAATCGCCAAGACGACCCGGACGGCA CTTTCCAACAACCCCAGAGCGAGTCGACGCAGCCAGCGAACCAGGCGTCGGCTTTATCTGATGGTCACGGCCATC ATGGTGCCTACGTTGCCTCTAGTTGTCGCCGTGGCCGTCGCAAACGTGTTGCAAAAGTCCGGCGGAGAACACTTT GATTTTTACGCCGTCCATAACCAGGCTGAGCCGCCCTGGTCCGTCATTCTCTTCCTTCCGTCGTCGGAGATTCTG TGGATCAACTTGAACAACTGCTACATCAATGTCCTCGTCGCCATTCCCATCTTCGGTTTCTTCGGCACCACCAAG GACGCCATTAACGAGTACCGACTCGTTGCCTTGTCGGTTGGCCTTGGCTACCTCTTCCCCGCTCTTCGACGAGAG TACGATCCGGACAGGATGCCTTGCTCGGCAACATCGACAGGGACAAGCGGCCCAGCTTTGACTGTTCAAAGCTTC TCCTCTTCACCGTTTTCAAAGAAGCCTCGCCGCCTCGCTCTCTTTCGATCCGTCTCTTCCTCTCGTGATGTGGAA CGCGACAACGAACCTTTTGAGGAAGACGTCGCCATATATCCCTCACAGACACGGCAGGATACTTCTGTGACGGAT CCCGCCCGTCATCGCAACCCCTTTCTCTTCCGCACTCGTCTCAACTTCCGCCTGCCAATTCGAACCGCGCAGCAC AGCGAGTTTGTTCTTCGACCTCTCCCACCCGCGGCCCATATCGACGACGCGACTTCAGCAGAGAGCTCCGAGTTT GGGGCTGTTTGCGGTGGCAACATGCCGCCTCAACGCAACACGGCCAATTGA |
| Gene | >Ophun1|4263 ATGGATCCCTCGTCGGAGCCGGGGATTCACCTCCTGAGCGGAAACCAGACCGCCGTCGTCGGCCCACAGCCGTCT GCAATGGCCTCTCTCACTCACAACCTGATTCTACGCGTGACGCTGGCGCTGGTCGCCAACGCCGTGTGCCTTGTA CCGCTGCGAGTTCTCCGTCGAAACGGCGAGTTTGCTGCGGCCGTCTGCGTCATCTCGGTCGAGCTGCTCAATTTC GAATCCATTCTCTGCGCGCTCATCTGGCGTGACGATGATGTTGCTTCCTGGTGGCCCGGCTATGGCCTCTGCGAC ATCATCATCCACTTGCACAACGCCGTCACGGCCCTCTTCATCAGCTGTCTCCTCGCCATTATGCGGAATCTTTAC CAGCAGGTCGGTCTCGCGCGGGCCGGGCCTCTTCATCGCAGCGAGAGACGGCGCCGCAACCTCGTGCAGGCCCTC ATCATCTTTCCCCTGCCTCTACTCAATCTGGCCCTAACATTGATCGTCGCTGAACGACGCTATGTCATTGGCACT CTCATGGGCTGTACCTGGGCACCGCATTCGTCCTGGCCTAACTTGGCCTTTTTTGTCTTTCCCCCGGTCGTCCTA TCGGTCGTTACCGTTATCTACGCAGGTAAGTCTGAATCGTGTGAGCATCAAGGGAGCTTTGAACTGATCAACGGG GACATTGATAGCTCTCACGTACTTTCGCTTCCGCGAAATCGCCAAGACGACCCGGACGGCACTTTCCAACAACCC CAGAGCGAGTCGACGCAGCCAGCGAACCAGGCGTCGGCTTTATCTGATGGTCACGGCCATCATGGTGCCTACGTT GCCTCTAGTTGTCGCCGTGGCCGTCGCAAACGTGTTGCAAAAGTCCGGCGGAGAACACTTTGATTTTTACGCCGT CCATAACCAGGCTGAGCCGCCCTGGTCCGTCATTCTCTTCCTTCCGTCGTCGGAGATTCTGTGGATCAACTTGAA CAACTGCTACATCAATGTCCTCGTCGCCATTCCCATCTTCGGTTTCTTCGGCACCACCAAGGACGCCATTAACGA GTACCGACTCGTTGCCTTGTCGGTTGGCCTTGGCTACCTCTTCCCCGCTCTTCGACGAGAGTACGATCCGGACAG GATGCCTTGCTCGGCAACATCGACAGGGACAAGCGGCCCAGCTTTGACTGTTCAAAGGTAAGTTGGCTCTGATAC TCGTTCCTGCCTTGAAGCGGCGCTGACGTTGTTGTCTCTCAGCTTCTCCTCTTCACCGTTTTCAAAGAAGCCTCG CCGCCTCGCTCTCTTTCGATCCGTCTCTTCCTCTCGTGATGTGGAACGCGACAACGAACCTTTTGAGGAAGACGT CGCCATATATCCCTCACAGACACGGCAGGATACTTCTGTGACGGATCCCGCCCGTCATCGCAACCCCTTTCTCTT CCGCACTCGTCTCAACTTCCGCCTGCCAATTCGAACCGCGCAGCACAGCGAGTTTGTTCTTCGACCTCTCCCACC CGCGGCCCATATCGACGACGCGACTTCAGCAGAGAGCTCCGAGTTTGGGGCTGTTTGCGGTGGCAACATGCCGCC TCAACGCAACACGGCCAATTGA |