Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|4187
Gene name
Location	Contig_384:10405..11200
Strand	+
Gene length (bp)	795
Transcript length (bp)	690
Coding sequence length (bp)	690
Protein length (aa)	230

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07883	Cupin_2	Cupin domain	2.5E-09	65	113

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 47	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|4187 MPIDLAMSASDRKQVALPHEYEDGILAITAMGGGITTRVLPDNGRAFRFEVIFRTDHVRLRDAPKPPMHFHVYQE EYVEVLEGVLVVELDGKEHVLRPGDGILTLPRGVDHRTYPLDGGEKKKVRMLLVGEQSSSPFKLELAFFENWYAY QEHMFQSGKWLDPIQVLCVLKMFDAAGTYFTLPWWLPFRSSASRLLGIVVGRWIGHLLGYQPFYDEWTTSKMETK EKAG*
Coding	>Ophun1\|4187 ATGCCCATCGACCTCGCCATGAGTGCCAGCGATAGAAAGCAAGTGGCTCTGCCTCACGAGTATGAGGACGGCATC CTCGCCATCACTGCCATGGGCGGTGGAATCACCACCAGAGTCCTTCCCGACAACGGACGAGCGTTCCGGTTCGAG GTCATCTTCCGAACCGACCACGTTCGTCTCCGAGACGCTCCTAAACCGCCGATGCACTTTCACGTCTACCAGGAG GAATACGTCGAGGTGCTCGAGGGCGTCCTCGTCGTCGAACTCGATGGCAAAGAGCATGTTCTGCGACCAGGTGAT GGCATCTTGACGCTGCCGCGAGGCGTCGATCATCGGACTTATCCGCTCGACGGGGGAGAGAAGAAGAAGGTGAGG ATGCTCCTCGTAGGAGAACAGAGCTCGAGTCCATTCAAACTTGAGCTTGCCTTCTTCGAGAACTGGTACGCCTAT CAGGAGCACATGTTCCAGTCCGGCAAGTGGCTGGATCCGATCCAGGTGCTATGTGTACTGAAGATGTTTGACGCT GCCGGCACGTACTTTACTCTTCCATGGTGGCTGCCCTTTCGCTCCAGCGCTTCCCGGCTGCTGGGCATCGTGGTG GGAAGATGGATAGGACACCTGCTGGGATACCAGCCCTTTTACGACGAGTGGACGACGAGCAAGATGGAGACGAAA GAGAAGGCTGGCTAA
Transcript	>Ophun1\|4187 ATGCCCATCGACCTCGCCATGAGTGCCAGCGATAGAAAGCAAGTGGCTCTGCCTCACGAGTATGAGGACGGCATC CTCGCCATCACTGCCATGGGCGGTGGAATCACCACCAGAGTCCTTCCCGACAACGGACGAGCGTTCCGGTTCGAG GTCATCTTCCGAACCGACCACGTTCGTCTCCGAGACGCTCCTAAACCGCCGATGCACTTTCACGTCTACCAGGAG GAATACGTCGAGGTGCTCGAGGGCGTCCTCGTCGTCGAACTCGATGGCAAAGAGCATGTTCTGCGACCAGGTGAT GGCATCTTGACGCTGCCGCGAGGCGTCGATCATCGGACTTATCCGCTCGACGGGGGAGAGAAGAAGAAGGTGAGG ATGCTCCTCGTAGGAGAACAGAGCTCGAGTCCATTCAAACTTGAGCTTGCCTTCTTCGAGAACTGGTACGCCTAT CAGGAGCACATGTTCCAGTCCGGCAAGTGGCTGGATCCGATCCAGGTGCTATGTGTACTGAAGATGTTTGACGCT GCCGGCACGTACTTTACTCTTCCATGGTGGCTGCCCTTTCGCTCCAGCGCTTCCCGGCTGCTGGGCATCGTGGTG GGAAGATGGATAGGACACCTGCTGGGATACCAGCCCTTTTACGACGAGTGGACGACGAGCAAGATGGAGACGAAA GAGAAGGCTGGCTAA
Gene	>Ophun1\|4187 ATGCCCATCGACCTCGCCATGAGTGCCAGCGATAGAAAGCAAGTGGCTCTGCCTCACGAGTATGAGGACGGCATC CTCGCCATCACTGCGTACGTCGACTGCCCTGTCATTCCACAGAGAAGACATTGACCGGCCGGAAGCATGGGCGGT GGAATCACCACCAGAGTCCTTCCCGACAACGGACGAGCGTTCCGGTTCGAGGTCATCTTCCGAACCGACCACGTT CGTCTCCGAGACGCTCCTAAACCGCCGATGCACTTTCACGTCTACCAGGAGGAATACGTCGAGGTGCTCGAGGGC GTCCTCGTCGTCGAACTCGATGGCAAAGAGCATGTTCTGCGACCAGGTGATGGCATCTTGACGCTGCCGCGAGGC GTCGATCATCGGACTTATCCGCTCGACGGGGGAGAGAAGAAGAAGGTGAGGATGCTCCTCGTAGGAGAACAGAGC TCGAGTCCATTCAAACTTGAGCTTGCCTTCTTCGAGAACTGGTACGCCTATCAGGAGCACATGTTCCAGTCCGGC AAGTGGCTGGATCCGATCCAGGTGCTATGTGTAAGTGTGATGGCCCGGTTGCTATTCTCTTCCATGGTCTGGCTC ATGCTACAGGTACTGAAGATGTTTGACGCTGCCGGCACGTACTTTACTCTTCCATGGTGGCTGCCCTTTCGCTCC AGCGCTTCCCGGCTGCTGGGCATCGTGGTGGGAAGATGGATAGGACACCTGCTGGGATACCAGCCCTTTTACGAC GAGTGGACGACGAGCAAGATGGAGACGAAAGAGAAGGCTGGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail