Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4172
Gene name
LocationContig_382:7699..8412
Strand+
Gene length (bp)713
Transcript length (bp)648
Coding sequence length (bp)648
Protein length (aa) 216

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20238 DUF6595 Family of unknown function (DUF6595) 6.3E-36 20 159

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q4WCX9|YA280_ASPFU Uncharacterized protein AFUA_6G02800 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_6G02800 PE=1 SV=1 9 162 7.0E-13

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 2 24 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4172
MVAAFVVVAAVLAMAEAVLGHFALTFPPWRADSLSNKAYSQWNHPCAGVDYGAGNITDWPLQGGSLRLELHHKWT
YLYVNLGLGRNTTNFNVSLTPDFLNVTGKGTLCIDKLPIPIPVENGTLATLQVVTPGASGSALYNCADIRLVEGA
KSPDNCTNDGVSVKTVREQQDTPASGNASSGQPAKGLAASASAGPYTVALGTACALASLGLSLVL*
Coding >Ophun1|4172
ATGGTCGCCGCATTCGTCGTCGTCGCTGCTGTCCTGGCCATGGCTGAGGCTGTCCTTGGCCACTTTGCCCTCACC
TTTCCCCCTTGGCGAGCCGACTCGCTCAGCAACAAAGCCTACAGCCAATGGAACCACCCCTGCGCCGGCGTCGAC
TACGGAGCCGGCAACATCACCGACTGGCCTCTTCAAGGCGGCTCCCTCCGTCTGGAGCTACACCACAAATGGACC
TACCTCTACGTCAACCTCGGCCTCGGCCGCAACACCACAAACTTCAACGTCTCCCTCACCCCCGACTTCCTCAAC
GTCACCGGCAAGGGCACCCTCTGCATCGACAAGCTGCCCATCCCCATCCCCGTCGAAAACGGCACCCTGGCCACC
CTCCAGGTCGTCACTCCCGGCGCCTCGGGCTCGGCGCTGTACAACTGCGCGGATATCCGGCTCGTCGAGGGCGCC
AAGTCGCCGGATAACTGCACCAACGACGGTGTTAGTGTCAAGACGGTTCGTGAGCAGCAGGATACGCCTGCGAGC
GGGAATGCCTCGTCGGGACAGCCGGCCAAGGGTCTGGCTGCGTCGGCGTCGGCGGGCCCTTATACTGTCGCCTTG
GGAACCGCCTGCGCGCTGGCTTCCTTGGGTCTTTCACTTGTTCTGTAG
Transcript >Ophun1|4172
ATGGTCGCCGCATTCGTCGTCGTCGCTGCTGTCCTGGCCATGGCTGAGGCTGTCCTTGGCCACTTTGCCCTCACC
TTTCCCCCTTGGCGAGCCGACTCGCTCAGCAACAAAGCCTACAGCCAATGGAACCACCCCTGCGCCGGCGTCGAC
TACGGAGCCGGCAACATCACCGACTGGCCTCTTCAAGGCGGCTCCCTCCGTCTGGAGCTACACCACAAATGGACC
TACCTCTACGTCAACCTCGGCCTCGGCCGCAACACCACAAACTTCAACGTCTCCCTCACCCCCGACTTCCTCAAC
GTCACCGGCAAGGGCACCCTCTGCATCGACAAGCTGCCCATCCCCATCCCCGTCGAAAACGGCACCCTGGCCACC
CTCCAGGTCGTCACTCCCGGCGCCTCGGGCTCGGCGCTGTACAACTGCGCGGATATCCGGCTCGTCGAGGGCGCC
AAGTCGCCGGATAACTGCACCAACGACGGTGTTAGTGTCAAGACGGTTCGTGAGCAGCAGGATACGCCTGCGAGC
GGGAATGCCTCGTCGGGACAGCCGGCCAAGGGTCTGGCTGCGTCGGCGTCGGCGGGCCCTTATACTGTCGCCTTG
GGAACCGCCTGCGCGCTGGCTTCCTTGGGTCTTTCACTTGTTCTGTAG
Gene >Ophun1|4172
ATGGTCGCCGCATTCGTCGTCGTCGCTGCTGTCCTGGCCATGGCTGAGGCTGTCCTTGGCCACTTTGCCCTCACC
TTTCCCCCTTGGCGAGCCGACTCGCTCAGCAACAAAGCCTACAGCCAATGGAACCACCCCTGTACGGAAAAAGAC
ACACAACACCCGTACCTCCCATCCCGTCTACTAACCTCGAAAACCTCACAGGCGCCGGCGTCGACTACGGAGCCG
GCAACATCACCGACTGGCCTCTTCAAGGCGGCTCCCTCCGTCTGGAGCTACACCACAAATGGACCTACCTCTACG
TCAACCTCGGCCTCGGCCGCAACACCACAAACTTCAACGTCTCCCTCACCCCCGACTTCCTCAACGTCACCGGCA
AGGGCACCCTCTGCATCGACAAGCTGCCCATCCCCATCCCCGTCGAAAACGGCACCCTGGCCACCCTCCAGGTCG
TCACTCCCGGCGCCTCGGGCTCGGCGCTGTACAACTGCGCGGATATCCGGCTCGTCGAGGGCGCCAAGTCGCCGG
ATAACTGCACCAACGACGGTGTTAGTGTCAAGACGGTTCGTGAGCAGCAGGATACGCCTGCGAGCGGGAATGCCT
CGTCGGGACAGCCGGCCAAGGGTCTGGCTGCGTCGGCGTCGGCGGGCCCTTATACTGTCGCCTTGGGAACCGCCT
GCGCGCTGGCTTCCTTGGGTCTTTCACTTGTTCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail