Protein ID | Ophun1|4099 |
Gene name | |
Location | Contig_376:1797..3202 |
Strand | + |
Gene length (bp) | 1405 |
Transcript length (bp) | 1161 |
Coding sequence length (bp) | 1161 |
Protein length (aa) | 387 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 39 | 61 | 22 |
2 | 74 | 93 | 19 |
3 | 103 | 125 | 22 |
4 | 146 | 168 | 22 |
5 | 188 | 210 | 22 |
6 | 223 | 245 | 22 |
7 | 260 | 282 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 441 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|4099 MENFLSLPPARQQAILNGPGLAPPPGVTPNFTHPPNRTTMGITIISICLVLGTLTGLVRLYSRFCTKKMHAEDGW SLLAFGHYGGFFVHQWNVQAKTMITISYVLYFFPIFYCMTMLFAKTAILLEWTRIFVPVIRNSFYWISRLTTVIN VCLYLSVIVATSLYCVPVEKVWHKWVPGHCLNRKAVDTCVAVFNLAIDLLILALPQRIIWSLRIDTSRKIGVSIV FSVGLLACACAIARTYLVIQLDFTGDVTYKLCETFMFAYSEMTCVLMVFFVPASARAFKQNSVLSRMMSSLRSWT RLPGSKKSRSAEDVGGQFPPTIGSKPINRLFNSTDEETQALSLGEMRPAERFIVKTMEFEQREDAASKASTEPEV PDRRQHPWVKP* |
Coding | >Ophun1|4099 ATGGAGAATTTCCTCAGCCTCCCGCCTGCTCGGCAGCAGGCCATCCTCAACGGCCCCGGACTGGCGCCGCCACCG GGAGTTACCCCCAACTTCACTCACCCGCCCAACAGGACGACAATGGGCATCACCATCATCTCCATCTGCCTCGTC CTTGGCACGCTGACGGGCCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGATGCACGCTGAAGACGGCTGG AGCCTGCTCGCTTTTGGACACTATGGTGGCTTCTTTGTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACC ATTTCTTACGTCTTGTACTTCTTTCCTATTTTTTACTGCATGACGATGCTCTTCGCCAAGACAGCCATCTTACTC GAATGGACGCGCATCTTTGTGCCCGTCATCCGCAACTCGTTCTACTGGATCAGTCGGTTGACAACCGTCATCAAC GTCTGCTTATACCTGTCAGTCATTGTCGCCACGTCGTTGTATTGTGTGCCGGTAGAAAAGGTTTGGCACAAGTGG GTTCCGGGCCATTGCCTCAACCGTAAGGCTGTCGACACATGCGTTGCCGTCTTTAACCTGGCCATTGACCTCCTC ATCTTGGCTCTGCCGCAGCGAATCATCTGGTCTTTGAGGATTGATACGTCCAGGAAGATTGGCGTCTCAATCGTA TTTTCTGTTGGTTTGCTAGCTTGTGCCTGTGCCATCGCTCGGACGTATCTAGTCATCCAGCTGGATTTTACGGGC GACGTGACTTACAAGCTCTGCGAGACATTCATGTTTGCCTATTCGGAGATGACGTGCGTCCTCATGGTCTTTTTC GTGCCGGCGTCGGCGCGCGCCTTCAAGCAGAACAGCGTGCTGTCGAGGATGATGTCTTCACTGCGTTCCTGGACA CGACTGCCAGGGTCCAAAAAGAGCCGGTCGGCTGAGGACGTCGGAGGTCAATTCCCGCCTACCATTGGCAGCAAG CCCATCAACCGCCTGTTCAACTCGACAGATGAGGAGACGCAGGCGCTGAGTCTGGGCGAGATGAGGCCGGCGGAG CGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGCGAGGACGCGGCTTCCAAGGCATCCACGGAGCCGGAAGTG CCTGACCGCAGACAGCACCCCTGGGTGAAGCCATAG |
Transcript | >Ophun1|4099 ATGGAGAATTTCCTCAGCCTCCCGCCTGCTCGGCAGCAGGCCATCCTCAACGGCCCCGGACTGGCGCCGCCACCG GGAGTTACCCCCAACTTCACTCACCCGCCCAACAGGACGACAATGGGCATCACCATCATCTCCATCTGCCTCGTC CTTGGCACGCTGACGGGCCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGATGCACGCTGAAGACGGCTGG AGCCTGCTCGCTTTTGGACACTATGGTGGCTTCTTTGTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACC ATTTCTTACGTCTTGTACTTCTTTCCTATTTTTTACTGCATGACGATGCTCTTCGCCAAGACAGCCATCTTACTC GAATGGACGCGCATCTTTGTGCCCGTCATCCGCAACTCGTTCTACTGGATCAGTCGGTTGACAACCGTCATCAAC GTCTGCTTATACCTGTCAGTCATTGTCGCCACGTCGTTGTATTGTGTGCCGGTAGAAAAGGTTTGGCACAAGTGG GTTCCGGGCCATTGCCTCAACCGTAAGGCTGTCGACACATGCGTTGCCGTCTTTAACCTGGCCATTGACCTCCTC ATCTTGGCTCTGCCGCAGCGAATCATCTGGTCTTTGAGGATTGATACGTCCAGGAAGATTGGCGTCTCAATCGTA TTTTCTGTTGGTTTGCTAGCTTGTGCCTGTGCCATCGCTCGGACGTATCTAGTCATCCAGCTGGATTTTACGGGC GACGTGACTTACAAGCTCTGCGAGACATTCATGTTTGCCTATTCGGAGATGACGTGCGTCCTCATGGTCTTTTTC GTGCCGGCGTCGGCGCGCGCCTTCAAGCAGAACAGCGTGCTGTCGAGGATGATGTCTTCACTGCGTTCCTGGACA CGACTGCCAGGGTCCAAAAAGAGCCGGTCGGCTGAGGACGTCGGAGGTCAATTCCCGCCTACCATTGGCAGCAAG CCCATCAACCGCCTGTTCAACTCGACAGATGAGGAGACGCAGGCGCTGAGTCTGGGCGAGATGAGGCCGGCGGAG CGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGCGAGGACGCGGCTTCCAAGGCATCCACGGAGCCGGAAGTG CCTGACCGCAGACAGCACCCCTGGGTGAAGCCATAG |
Gene | >Ophun1|4099 ATGGAGAATTTCCTCAGCCTCCCGCCTGCTCGGCAGCAGGCCATCCTCAACGGCCCCGGACTGGCGCCGCCACCG GGAGTTACCCCCAACTTCACTCACCCGCCCAACAGGACGACAATGGGCATCACCATCATCTCCATCTGCCTCGTC CTTGGCACGCTGACGGGCCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGATGCACGCTGAAGACGGTATG TAGCCAATCTCGATGGAGCCTGCTCCGTGCTCATAGATCAACCATCCAGTCCTCGGCTTCGCGGCATACGTACGA ACACATTGCCGCCCACGTGCCTGTTTTCTCAGCTCACCATGACAGGTTTCCTTCGTCGCCTCAGGCTGGAGCCTG CTCGCTTTTGGACACTATGGTGGCTTCTTTGTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACCATTTCT TACGTCGGTCTCGCACGCCTCCCACAAGAGCGCCGGCTGACGTTGACCAGGTCTTGTACTTCTTTCCTATTTTTT ACTGCATGACGATGCTCTTCGCCAAGACAGCCATCTTACTCGAATGGACGCGCATCTTTGTGCCCGTCATCCGCA ACTCGTTCTACTGGATCAGTCGGTTGACAACCGTCATCAACGTCTGCTTATACCTGTCAGTCATTGTCGCCACGT CGTTGTATTGTGTGCCGGTAGAAAAGGTTTGGCACAAGTGGGTTCCGGGCCATTGCCTCAACCGTAAGGCTGTCG ACACATGCGTTGCCGTCTTTAACCTGGCCATTGACCTCCTCATCTTGGCTCTGCCGCAGCGAATCATCTGGTCTT TGAGGATTGATACGTCCAGGAAGATTGGCGTCTCAATCGTATTTTCTGTTGGTTTGCTGTGAGTCGTCCTGTCCG AGTATCAAAGCTGGATGCTGATCATTGGCCTGCTAGAGCTTGTGCCTGTGCCATCGCTCGGACGTATCTAGTCAT CCAGCTGGATTTTACGGGCGACGTGACTTACAAGCTCTGCGAGACATTCATGTTTGCCTATTCGGAGATGACGTG CGTCCTCATGGTCTTTTTCGTGCCGGCGTCGGCGCGCGCCTTCAAGCAGAACAGCGTGCTGTCGAGGATGATGTC TTCACTGCGTTCCTGGACACGACTGCCAGGGTCCAAAAAGAGCCGGTCGGCTGAGGACGTCGGAGGTCAATTCCC GCCTACCATTGGCAGCAAGCCCATCAACCGCCTGTTCAACTCGACAGATGAGGAGACGCAGGCGCTGAGTCTGGG CGAGATGAGGCCGGCGGAGCGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGCGAGGACGCGGCTTCCAAGGC ATCCACGGAGCCGGAAGTGCCTGACCGCAGACAGCACCCCTGGGTGAAGCCATAG |