© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|4039 |
| Gene name | |
| Location | Contig_369:252..1434 |
| Strand | - |
| Gene length (bp) | 1182 |
| Transcript length (bp) | 993 |
| Coding sequence length (bp) | 993 |
| Protein length (aa) | 331 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.5E-14 | 96 | 327 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 125 | 147 | 22 |
| 2 | 157 | 179 | 22 |
| 3 | 192 | 214 | 22 |
| 4 | 219 | 238 | 19 |
| 5 | 284 | 306 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|4039 MPATDTPIQEETPLLTTNNQTIPPKDASLQRRVIASCVLFLFIVEVSSFVMEPATQEIVEDIICRGHFPDHKLRM PVLDGRCKDPAVQKTLAMIRSWSMSADMLIPLVVQVPYGILADRYGRRTVLILAFVGCVLQTSWVILVLRLPDIF SVWSLLYGSAAYAIGGGGQMAAAMIWTIITDITPISDRTTIFYQLQACYLLFAVLVNPLSAFLLSIDPWIGMWLG FGALIFSVAAACLIPETLCLRHRDDETEHVSARDGETPMKVKAAWFVEAGAAIRRDAGHVWHFVFASRSIVTILL AYGLYIPAKLGVRLNILQYMTRRFGWEWST* |
| Coding | >Ophun1|4039 ATGCCCGCAACAGACACCCCCATCCAAGAGGAAACACCTCTCCTCACCACAAACAACCAGACCATCCCCCCAAAA GACGCATCCCTCCAGCGCCGCGTCATCGCCTCATGCGTCTTATTCCTCTTCATCGTCGAAGTCAGCAGCTTCGTC ATGGAGCCTGCGACGCAAGAAATCGTCGAGGACATCATTTGTCGGGGCCACTTTCCGGATCACAAGCTGCGGATG CCCGTCTTGGATGGCCGCTGTAAGGATCCGGCTGTGCAGAAGACGTTGGCTATGATCCGGTCTTGGTCCATGTCG GCTGATATGCTCATTCCGCTCGTCGTTCAGGTTCCTTATGGGATCCTCGCTGATAGATATGGCCGGAGGACGGTG TTGATACTAGCCTTTGTTGGGTGCGTCCTCCAGACATCATGGGTCATCTTGGTCTTGCGTCTCCCCGACATCTTT TCCGTCTGGTCCCTCCTCTACGGAAGCGCTGCCTACGCCATCGGCGGCGGAGGCCAAATGGCAGCAGCCATGATC TGGACCATCATCACCGACATAACGCCCATCTCAGACCGCACAACCATCTTCTACCAGCTCCAAGCCTGCTACCTT CTCTTCGCCGTCCTCGTCAACCCGCTATCTGCCTTTCTGCTGAGCATCGATCCCTGGATCGGTATGTGGCTTGGC TTTGGCGCCCTCATTTTCAGTGTGGCGGCCGCCTGTCTGATCCCGGAGACTCTGTGCCTGCGCCACCGGGACGAC GAGACGGAACATGTTTCTGCTCGGGATGGAGAGACGCCTATGAAGGTCAAGGCTGCTTGGTTTGTGGAGGCTGGG GCGGCTATCAGGCGTGATGCTGGCCATGTCTGGCATTTCGTCTTTGCGTCGAGGAGCATCGTCACTATTCTTCTG GCTTATGGGCTCTACATCCCAGCCAAGCTCGGAGTTAGACTCAACATTCTTCAGTACATGACGAGGCGCTTCGGC TGGGAGTGGTCAACGTAA |
| Transcript | >Ophun1|4039 ATGCCCGCAACAGACACCCCCATCCAAGAGGAAACACCTCTCCTCACCACAAACAACCAGACCATCCCCCCAAAA GACGCATCCCTCCAGCGCCGCGTCATCGCCTCATGCGTCTTATTCCTCTTCATCGTCGAAGTCAGCAGCTTCGTC ATGGAGCCTGCGACGCAAGAAATCGTCGAGGACATCATTTGTCGGGGCCACTTTCCGGATCACAAGCTGCGGATG CCCGTCTTGGATGGCCGCTGTAAGGATCCGGCTGTGCAGAAGACGTTGGCTATGATCCGGTCTTGGTCCATGTCG GCTGATATGCTCATTCCGCTCGTCGTTCAGGTTCCTTATGGGATCCTCGCTGATAGATATGGCCGGAGGACGGTG TTGATACTAGCCTTTGTTGGGTGCGTCCTCCAGACATCATGGGTCATCTTGGTCTTGCGTCTCCCCGACATCTTT TCCGTCTGGTCCCTCCTCTACGGAAGCGCTGCCTACGCCATCGGCGGCGGAGGCCAAATGGCAGCAGCCATGATC TGGACCATCATCACCGACATAACGCCCATCTCAGACCGCACAACCATCTTCTACCAGCTCCAAGCCTGCTACCTT CTCTTCGCCGTCCTCGTCAACCCGCTATCTGCCTTTCTGCTGAGCATCGATCCCTGGATCGGTATGTGGCTTGGC TTTGGCGCCCTCATTTTCAGTGTGGCGGCCGCCTGTCTGATCCCGGAGACTCTGTGCCTGCGCCACCGGGACGAC GAGACGGAACATGTTTCTGCTCGGGATGGAGAGACGCCTATGAAGGTCAAGGCTGCTTGGTTTGTGGAGGCTGGG GCGGCTATCAGGCGTGATGCTGGCCATGTCTGGCATTTCGTCTTTGCGTCGAGGAGCATCGTCACTATTCTTCTG GCTTATGGGCTCTACATCCCAGCCAAGCTCGGAGTTAGACTCAACATTCTTCAGTACATGACGAGGCGCTTCGGC TGGGAGTGGTCAACGTAA |
| Gene | >Ophun1|4039 ATGCCCGCAACAGACACCCCCATCCAAGAGGAAACACCTCTCCTCACCACAAACAACCAGACCATCCCCCCAAAA GACGCATCCCTCCAGCGCCGCGTCATCGCCTCATGCGTCTTATTCCTCTTCATCGTCGAAGTCAGCAGCTTCGTC ATGGAGCCTGCGACGCAAGAAATCGTCGAGGACATCATTTGTCGGGGCCACTTTCCGGATCACAAGCTGCGGATG CCCGTCTTGGATGGCCGCTGTAAGGATCCGGCTGTGCAGAAGACGTTGGCTATGATCCGGTCTTGGTCCATGTCG GCTGATATGCTCATTCGTATGTGTGTTTGAGACTTGGGCTGAGTGTGGAGACTGACTATATCAGCGCTCGTCGTT CAGGTTCCTTATGGGATCCTCGCTGATAGATATGGCCGGAGGACGGTGTTGATACTAGCCTTTGTTGGGTGCGTC CTCCAGACATCATGGGTCATCTTGGTCTGTGAGTATACGCAACATAGGCATACACGTACAATCTCCCTTACCCTA ACCCCTGATCAGTGCGTCTCCCCGACATCTTTTCCGTCTGGTCCCTCCTCTACGGAAGCGCTGCCTACGCCATCG GCGGCGGAGGCCAAATGGCAGCAGCCATGATCTGGACCATCATCACCGACATAACGCCCATCTCAGACCGCACAA CCATCTTCTACCAGCTCCAAGCCTGCTACCTTCTCTTCGCCGTCCTCGTCAACCCGCTATCTGCCTTTCTGCTGA GCATCGATCCCTGGATCGGTATGTGGCTTGGCTTTGGCGCCCTCATTTTCAGTGTGGCGGCCGCCTGTCTGATCC CGGAGACTCTGTGCCTGCGCCACCGGGACGACGAGACGGAACATGTTTCTGCTCGGGATGGAGAGACGCCTATGA AGGTCAAGGCTGCTTGGTTTGTGGAGGCTGGGGCGGCTATCAGGCGTGATGCTGGCCATGTCTGGCATTTCGTCT TTGCGTCGAGGAGCATCGTCACTATTCTTCTGGCTTATGGGCTCTACATCCCAGCCAAGCTCGGAGTTAGACTCA ACATTCTTCAGTACATGACGAGGCGCTTCGGCTGGGAGTGGTCAACGGTTTGTTTCCAATTCCCTTGTCGTAAAC ATGCATTACCACATACTCACGTATTTTCCAGGCAACCTACATCTCCACAATCAGTAA |