Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|3965
Gene name
Location	Contig_36:28289..30740
Strand	+
Gene length (bp)	2451
Transcript length (bp)	2397
Coding sequence length (bp)	2397
Protein length (aa)	799

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01302	CAP_GLY	CAP-Gly domain	2.9E-17	107	175
PF16641	CLIP1_ZNF	CLIP1 zinc knuckle	2.5E-03	685	700
PF16641	CLIP1_ZNF	CLIP1 zinc knuckle	6.0E-04	777	792

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P79065\|TIP1_SCHPO	Tip elongation protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tip1 PE=1 SV=1	107	175	1.0E-10
sp\|Q9UDT6\|CLIP2_HUMAN	CAP-Gly domain-containing linker protein 2 OS=Homo sapiens GN=CLIP2 PE=1 SV=1	84	207	4.0E-09
sp\|P11709\|BIK1_YEAST	Nuclear fusion protein BIK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIK1 PE=1 SV=1	107	176	4.0E-09
sp\|Q9Z0H8\|CLIP2_MOUSE	CAP-Gly domain-containing linker protein 2 OS=Mus musculus GN=Clip2 PE=1 SV=2	84	207	6.0E-09
sp\|O55156\|CLIP2_RAT	CAP-Gly domain-containing linker protein 2 OS=Rattus norvegicus GN=Clip2 PE=1 SV=1	84	207	6.0E-09

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P79065\|TIP1_SCHPO	Tip elongation protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tip1 PE=1 SV=1	107	175	1.0E-10
sp\|Q9UDT6\|CLIP2_HUMAN	CAP-Gly domain-containing linker protein 2 OS=Homo sapiens GN=CLIP2 PE=1 SV=1	84	207	4.0E-09
sp\|P11709\|BIK1_YEAST	Nuclear fusion protein BIK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIK1 PE=1 SV=1	107	176	4.0E-09
sp\|Q9Z0H8\|CLIP2_MOUSE	CAP-Gly domain-containing linker protein 2 OS=Mus musculus GN=Clip2 PE=1 SV=2	84	207	6.0E-09
sp\|O55156\|CLIP2_RAT	CAP-Gly domain-containing linker protein 2 OS=Rattus norvegicus GN=Clip2 PE=1 SV=1	84	207	6.0E-09
sp\|P34531\|YM92_CAEEL	Uncharacterized protein M01A8.2 OS=Caenorhabditis elegans GN=M01A8.2 PE=3 SV=4	107	175	2.0E-08
sp\|P30622\|CLIP1_HUMAN	CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1 PE=1 SV=2	97	177	2.0E-08
sp\|Q922J3\|CLIP1_MOUSE	CAP-Gly domain-containing linker protein 1 OS=Mus musculus GN=Clip1 PE=1 SV=1	97	177	2.0E-08
sp\|Q8CI96\|CLIP4_MOUSE	CAP-Gly domain-containing linker protein 4 OS=Mus musculus GN=Clip4 PE=1 SV=1	105	192	7.0E-08
sp\|Q8N3C7\|CLIP4_HUMAN	CAP-Gly domain-containing linker protein 4 OS=Homo sapiens GN=CLIP4 PE=1 SV=1	105	191	1.0E-07
sp\|Q66HD5\|CLIP4_RAT	CAP-Gly domain-containing linker protein 4 OS=Rattus norvegicus GN=Clip4 PE=1 SV=1	105	179	2.0E-07
sp\|Q8N3C7\|CLIP4_HUMAN	CAP-Gly domain-containing linker protein 4 OS=Homo sapiens GN=CLIP4 PE=1 SV=1	99	177	2.0E-06
sp\|O42184\|CLIP1_CHICK	CAP-Gly domain-containing linker protein 1 OS=Gallus gallus GN=CLIP1 PE=2 SV=1	102	181	3.0E-06
sp\|B9EHT4\|CLIP3_MOUSE	CAP-Gly domain-containing linker protein 3 OS=Mus musculus GN=Clip3 PE=1 SV=1	91	194	5.0E-06
sp\|Q5R686\|CLIP3_PONAB	CAP-Gly domain-containing linker protein 3 OS=Pongo abelii GN=CLIP3 PE=2 SV=1	91	194	5.0E-06
sp\|Q96DZ5\|CLIP3_HUMAN	CAP-Gly domain-containing linker protein 3 OS=Homo sapiens GN=CLIP3 PE=1 SV=3	91	194	6.0E-06
sp\|Q5U243\|CLIP3_XENLA	CAP-Gly domain-containing linker protein 3 OS=Xenopus laevis GN=clip3 PE=2 SV=1	91	177	6.0E-06
sp\|P30622\|CLIP1_HUMAN	CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1 PE=1 SV=2	102	178	7.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 36	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|3965 MAPTATATTTTSATSAFHSSSRSVLSRAHRRPANSASTPDLASVYVAQSRLVPLGLARKASLVALTPSSLASIPD VSESYALDSVLSDSAYDMAPLSPSRGADDVAVGDAVDVPGGMHGTVRFVGTVQGKKGSFAGVELHADFAARGKNN GDVDGVSYFTTTTPGAGIFVPLAKVARRRVTALISPMTPTARFPAAPRNGNGPKSITPPTPALPKFSASVGPGAR APSPQLKRPRASLPRPDSPSRRLQMTPGPRPSLGAPAKITSRYGSPTNKFAQSVRGDPSKKSSKLDTSKSATGPR SASALGNRLHYDDETASVGRFQRPKNNGSVGSTSSANTNKMNYRPASRADNDEELERLRSQIADRDLQLKEQGTT LADMESSLVELQSLIGDPDLAQPRGNGVDDKDSAQLRVMLREKNEKIAMLTAEFDAHRADFRSTIDTLELASAET ERVYERRIEEMMTEVRELESRNLDMDSVASQLKGLEELVQELEEGLEDARRGEAEARGEAEFLRGDVERTRSELR REREKTLAGRNQAGDVPNASKELEQKEDEIRGLKAIIHSLSRDSVPPGQRPASLMNSAEDPVQAKIARDNLERRV AELQALLERKSKREEELELELETLRGGPQALAAAPLVTRSTRRDSRDTVIPHGSRSPDASHRRGQALDTMHESDT YSSATETSTLWCEICETNGHDILTCSNVFGSDRGDVSSSRAAALRALAPGDAQPAPLSPSKPKAAAVSTTVSAPG RNVKILPNPMEVGPVAGKESGIVDVEKWCAVCERDGHDSVDCPFEDAL*
Coding	>Ophun1\|3965 ATGGCTCCCACCGCTACCGCAACCACGACGACTTCGGCCACGTCGGCCTTTCACAGCAGCTCTCGTTCTGTCCTT TCTCGTGCCCACCGACGGCCTGCAAACTCGGCTTCAACTCCCGACTTGGCCTCGGTCTACGTCGCTCAGTCACGA CTCGTGCCTCTGGGACTAGCGCGCAAGGCCTCGCTCGTGGCACTGACTCCCAGTTCGCTCGCCAGCATCCCCGAT GTCAGTGAGAGTTACGCCCTCGACTCTGTCCTGAGCGACTCCGCCTACGACATGGCGCCCCTTTCCCCTTCTCGA GGTGCCGATGACGTGGCCGTTGGCGATGCTGTGGATGTCCCTGGTGGAATGCATGGCACTGTTCGCTTCGTCGGC ACCGTTCAGGGCAAGAAGGGATCTTTTGCCGGCGTCGAGCTGCATGCAGATTTCGCCGCTCGTGGCAAGAATAAT GGCGACGTAGATGGCGTTTCTTACTTTACCACTACGACGCCTGGCGCTGGCATCTTCGTCCCTCTCGCCAAAGTC GCCCGCCGACGCGTCACTGCCCTTATATCGCCCATGACGCCAACCGCCCGCTTCCCCGCCGCTCCTCGCAACGGC AACGGGCCCAAGAGCATCACGCCCCCTACCCCGGCCTTGCCCAAGTTCAGCGCCTCGGTCGGCCCAGGCGCGAGG GCTCCCAGTCCCCAGTTGAAGCGTCCGAGGGCTTCGCTGCCGCGGCCCGACTCTCCATCCCGTCGCCTGCAGATG ACGCCCGGGCCCCGGCCTTCTCTCGGCGCCCCGGCCAAGATAACATCGCGGTACGGCAGCCCGACCAACAAGTTC GCTCAGAGCGTCCGCGGCGATCCGAGCAAAAAGTCGTCCAAGTTGGACACCAGCAAGTCCGCCACGGGACCGCGA AGCGCTTCGGCACTGGGCAATCGGCTACACTATGACGATGAGACGGCCTCCGTCGGGCGTTTTCAACGACCCAAG AACAACGGCAGTGTCGGGTCAACCTCTTCGGCCAATACTAACAAGATGAACTATCGCCCAGCGTCTCGCGCCGAT AACGACGAAGAGCTGGAGCGTCTCCGCTCACAGATTGCCGACCGCGATCTGCAGCTCAAGGAGCAGGGAACCACC TTGGCCGATATGGAGAGCAGCCTAGTGGAGCTCCAGTCGCTCATAGGCGATCCCGACTTGGCCCAGCCCAGGGGC AACGGCGTGGACGACAAGGACTCTGCTCAGCTCCGCGTCATGTTGCGGGAGAAGAACGAAAAGATTGCCATGCTC ACGGCCGAGTTTGATGCCCACCGCGCCGACTTTCGAAGCACCATCGATACGCTCGAGCTTGCCAGCGCTGAGACG GAGCGGGTCTACGAGAGGCGCATAGAGGAGATGATGACCGAGGTCCGAGAACTGGAGTCTAGGAACCTGGACATG GACTCGGTGGCCAGTCAGCTCAAGGGGCTGGAGGAGCTCGTCCAGGAACTTGAGGAGGGCCTCGAGGATGCCCGT CGCGGGGAGGCCGAGGCTCGCGGGGAGGCCGAGTTCCTACGGGGCGACGTGGAGCGCACACGGTCGGAGCTCCGC CGCGAGCGCGAAAAGACGCTCGCCGGCCGCAACCAGGCGGGCGATGTACCCAACGCTTCCAAGGAGCTGGAGCAA AAAGAGGACGAGATAAGGGGCCTCAAGGCCATCATCCACTCGCTGAGCCGCGACTCCGTTCCTCCTGGACAGCGG CCGGCCTCGCTGATGAACTCGGCCGAAGACCCGGTGCAGGCCAAGATTGCGCGCGACAACCTGGAGAGGCGGGTG GCCGAGCTGCAGGCGCTCCTGGAGCGCAAGAGCAAGAGGGAGGAGGAGCTGGAGCTGGAGCTGGAGACGCTACGG GGCGGACCGCAGGCGCTGGCAGCGGCGCCTCTGGTAACGCGCAGCACGCGGCGAGACTCGCGCGACACCGTCATT CCACACGGCTCGCGTTCGCCCGACGCGTCTCACCGGAGAGGCCAGGCGCTGGACACGATGCACGAGAGCGACACG TACTCGTCGGCGACGGAGACGAGCACGCTCTGGTGCGAGATATGCGAGACCAACGGCCACGACATTCTGACGTGT TCCAACGTGTTTGGCTCCGATCGCGGCGACGTGAGCTCGAGTCGGGCGGCGGCTCTCCGCGCTCTGGCACCCGGT GATGCCCAGCCCGCGCCCCTCTCGCCGTCCAAGCCCAAGGCGGCGGCGGTGTCGACGACGGTATCGGCGCCAGGA CGCAACGTCAAGATCCTGCCCAACCCGATGGAGGTCGGTCCGGTGGCCGGCAAGGAGAGCGGCATCGTCGACGTG GAGAAATGGTGCGCCGTGTGCGAGCGCGACGGGCATGACAGCGTCGACTGCCCCTTTGAGGATGCGCTGTAA
Transcript	>Ophun1\|3965 ATGGCTCCCACCGCTACCGCAACCACGACGACTTCGGCCACGTCGGCCTTTCACAGCAGCTCTCGTTCTGTCCTT TCTCGTGCCCACCGACGGCCTGCAAACTCGGCTTCAACTCCCGACTTGGCCTCGGTCTACGTCGCTCAGTCACGA CTCGTGCCTCTGGGACTAGCGCGCAAGGCCTCGCTCGTGGCACTGACTCCCAGTTCGCTCGCCAGCATCCCCGAT GTCAGTGAGAGTTACGCCCTCGACTCTGTCCTGAGCGACTCCGCCTACGACATGGCGCCCCTTTCCCCTTCTCGA GGTGCCGATGACGTGGCCGTTGGCGATGCTGTGGATGTCCCTGGTGGAATGCATGGCACTGTTCGCTTCGTCGGC ACCGTTCAGGGCAAGAAGGGATCTTTTGCCGGCGTCGAGCTGCATGCAGATTTCGCCGCTCGTGGCAAGAATAAT GGCGACGTAGATGGCGTTTCTTACTTTACCACTACGACGCCTGGCGCTGGCATCTTCGTCCCTCTCGCCAAAGTC GCCCGCCGACGCGTCACTGCCCTTATATCGCCCATGACGCCAACCGCCCGCTTCCCCGCCGCTCCTCGCAACGGC AACGGGCCCAAGAGCATCACGCCCCCTACCCCGGCCTTGCCCAAGTTCAGCGCCTCGGTCGGCCCAGGCGCGAGG GCTCCCAGTCCCCAGTTGAAGCGTCCGAGGGCTTCGCTGCCGCGGCCCGACTCTCCATCCCGTCGCCTGCAGATG ACGCCCGGGCCCCGGCCTTCTCTCGGCGCCCCGGCCAAGATAACATCGCGGTACGGCAGCCCGACCAACAAGTTC GCTCAGAGCGTCCGCGGCGATCCGAGCAAAAAGTCGTCCAAGTTGGACACCAGCAAGTCCGCCACGGGACCGCGA AGCGCTTCGGCACTGGGCAATCGGCTACACTATGACGATGAGACGGCCTCCGTCGGGCGTTTTCAACGACCCAAG AACAACGGCAGTGTCGGGTCAACCTCTTCGGCCAATACTAACAAGATGAACTATCGCCCAGCGTCTCGCGCCGAT AACGACGAAGAGCTGGAGCGTCTCCGCTCACAGATTGCCGACCGCGATCTGCAGCTCAAGGAGCAGGGAACCACC TTGGCCGATATGGAGAGCAGCCTAGTGGAGCTCCAGTCGCTCATAGGCGATCCCGACTTGGCCCAGCCCAGGGGC AACGGCGTGGACGACAAGGACTCTGCTCAGCTCCGCGTCATGTTGCGGGAGAAGAACGAAAAGATTGCCATGCTC ACGGCCGAGTTTGATGCCCACCGCGCCGACTTTCGAAGCACCATCGATACGCTCGAGCTTGCCAGCGCTGAGACG GAGCGGGTCTACGAGAGGCGCATAGAGGAGATGATGACCGAGGTCCGAGAACTGGAGTCTAGGAACCTGGACATG GACTCGGTGGCCAGTCAGCTCAAGGGGCTGGAGGAGCTCGTCCAGGAACTTGAGGAGGGCCTCGAGGATGCCCGT CGCGGGGAGGCCGAGGCTCGCGGGGAGGCCGAGTTCCTACGGGGCGACGTGGAGCGCACACGGTCGGAGCTCCGC CGCGAGCGCGAAAAGACGCTCGCCGGCCGCAACCAGGCGGGCGATGTACCCAACGCTTCCAAGGAGCTGGAGCAA AAAGAGGACGAGATAAGGGGCCTCAAGGCCATCATCCACTCGCTGAGCCGCGACTCCGTTCCTCCTGGACAGCGG CCGGCCTCGCTGATGAACTCGGCCGAAGACCCGGTGCAGGCCAAGATTGCGCGCGACAACCTGGAGAGGCGGGTG GCCGAGCTGCAGGCGCTCCTGGAGCGCAAGAGCAAGAGGGAGGAGGAGCTGGAGCTGGAGCTGGAGACGCTACGG GGCGGACCGCAGGCGCTGGCAGCGGCGCCTCTGGTAACGCGCAGCACGCGGCGAGACTCGCGCGACACCGTCATT CCACACGGCTCGCGTTCGCCCGACGCGTCTCACCGGAGAGGCCAGGCGCTGGACACGATGCACGAGAGCGACACG TACTCGTCGGCGACGGAGACGAGCACGCTCTGGTGCGAGATATGCGAGACCAACGGCCACGACATTCTGACGTGT TCCAACGTGTTTGGCTCCGATCGCGGCGACGTGAGCTCGAGTCGGGCGGCGGCTCTCCGCGCTCTGGCACCCGGT GATGCCCAGCCCGCGCCCCTCTCGCCGTCCAAGCCCAAGGCGGCGGCGGTGTCGACGACGGTATCGGCGCCAGGA CGCAACGTCAAGATCCTGCCCAACCCGATGGAGGTCGGTCCGGTGGCCGGCAAGGAGAGCGGCATCGTCGACGTG GAGAAATGGTGCGCCGTGTGCGAGCGCGACGGGCATGACAGCGTCGACTGCCCCTTTGAGGATGCGCTGTAA
Gene	>Ophun1\|3965 ATGGCTCCCACCGCTACCGCAACCACGACGACTTCGGCCACGTCGGCCTTTCACAGCAGCTCTCGTTCTGTCCTT TCTCGTGCCCACCGACGGCCTGCAAACTCGGCTTCAACTCCCGACTTGGCCTCGGTCTACGTCGCTCAGTCACGA CTCGTGCCTCTGGGACTAGCGCGCAAGGCCTCGCTCGTGGCACTGACTCCCAGTTCGCTCGCCAGCATCCCCGAT GTCAGTGAGAGTTACGCCCTCGACTCTGTCCTGAGCGACTCCGCCTACGACATGGCGCCCCTTTCCCCTTCTCGA GGTGCCGATGACGTGGCCGTTGGCGATGCTGTGGATGTCCCTGGTGGAATGCATGGCACTGTTCGCTTCGTCGGC ACCGTTCAGGGCAAGAAGGGATCTTTTGCCGGCGTCGAGCTGCATGCAGATTTCGCCGCTCGTGGCAAGAATAAT GGCGACGTAGATGGGTATGTTGTCGTCCTTTTCTTGAGTCTGAGATGATACTGATATCGAGACTGCAGCGTTTCT TACTTTACCACTACGACGCCTGGCGCTGGCATCTTCGTCCCTCTCGCCAAAGTCGCCCGCCGACGCGTCACTGCC CTTATATCGCCCATGACGCCAACCGCCCGCTTCCCCGCCGCTCCTCGCAACGGCAACGGGCCCAAGAGCATCACG CCCCCTACCCCGGCCTTGCCCAAGTTCAGCGCCTCGGTCGGCCCAGGCGCGAGGGCTCCCAGTCCCCAGTTGAAG CGTCCGAGGGCTTCGCTGCCGCGGCCCGACTCTCCATCCCGTCGCCTGCAGATGACGCCCGGGCCCCGGCCTTCT CTCGGCGCCCCGGCCAAGATAACATCGCGGTACGGCAGCCCGACCAACAAGTTCGCTCAGAGCGTCCGCGGCGAT CCGAGCAAAAAGTCGTCCAAGTTGGACACCAGCAAGTCCGCCACGGGACCGCGAAGCGCTTCGGCACTGGGCAAT CGGCTACACTATGACGATGAGACGGCCTCCGTCGGGCGTTTTCAACGACCCAAGAACAACGGCAGTGTCGGGTCA ACCTCTTCGGCCAATACTAACAAGATGAACTATCGCCCAGCGTCTCGCGCCGATAACGACGAAGAGCTGGAGCGT CTCCGCTCACAGATTGCCGACCGCGATCTGCAGCTCAAGGAGCAGGGAACCACCTTGGCCGATATGGAGAGCAGC CTAGTGGAGCTCCAGTCGCTCATAGGCGATCCCGACTTGGCCCAGCCCAGGGGCAACGGCGTGGACGACAAGGAC TCTGCTCAGCTCCGCGTCATGTTGCGGGAGAAGAACGAAAAGATTGCCATGCTCACGGCCGAGTTTGATGCCCAC CGCGCCGACTTTCGAAGCACCATCGATACGCTCGAGCTTGCCAGCGCTGAGACGGAGCGGGTCTACGAGAGGCGC ATAGAGGAGATGATGACCGAGGTCCGAGAACTGGAGTCTAGGAACCTGGACATGGACTCGGTGGCCAGTCAGCTC AAGGGGCTGGAGGAGCTCGTCCAGGAACTTGAGGAGGGCCTCGAGGATGCCCGTCGCGGGGAGGCCGAGGCTCGC GGGGAGGCCGAGTTCCTACGGGGCGACGTGGAGCGCACACGGTCGGAGCTCCGCCGCGAGCGCGAAAAGACGCTC GCCGGCCGCAACCAGGCGGGCGATGTACCCAACGCTTCCAAGGAGCTGGAGCAAAAAGAGGACGAGATAAGGGGC CTCAAGGCCATCATCCACTCGCTGAGCCGCGACTCCGTTCCTCCTGGACAGCGGCCGGCCTCGCTGATGAACTCG GCCGAAGACCCGGTGCAGGCCAAGATTGCGCGCGACAACCTGGAGAGGCGGGTGGCCGAGCTGCAGGCGCTCCTG GAGCGCAAGAGCAAGAGGGAGGAGGAGCTGGAGCTGGAGCTGGAGACGCTACGGGGCGGACCGCAGGCGCTGGCA GCGGCGCCTCTGGTAACGCGCAGCACGCGGCGAGACTCGCGCGACACCGTCATTCCACACGGCTCGCGTTCGCCC GACGCGTCTCACCGGAGAGGCCAGGCGCTGGACACGATGCACGAGAGCGACACGTACTCGTCGGCGACGGAGACG AGCACGCTCTGGTGCGAGATATGCGAGACCAACGGCCACGACATTCTGACGTGTTCCAACGTGTTTGGCTCCGAT CGCGGCGACGTGAGCTCGAGTCGGGCGGCGGCTCTCCGCGCTCTGGCACCCGGTGATGCCCAGCCCGCGCCCCTC TCGCCGTCCAAGCCCAAGGCGGCGGCGGTGTCGACGACGGTATCGGCGCCAGGACGCAACGTCAAGATCCTGCCC AACCCGATGGAGGTCGGTCCGGTGGCCGGCAAGGAGAGCGGCATCGTCGACGTGGAGAAATGGTGCGCCGTGTGC GAGCGCGACGGGCATGACAGCGTCGACTGCCCCTTTGAGGATGCGCTGTAA

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