Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3863
Gene name
LocationContig_349:4229..4581
Strand+
Gene length (bp)352
Transcript length (bp)228
Coding sequence length (bp)228
Protein length (aa) 76

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P42117|NDUA3_NEUCR NADH-ubiquinone oxidoreductase 9.5 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo9.5 PE=1 SV=3 5 68 3.0E-18

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 23 45 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3863
MNPAPYFWSTPLKYCRWASRERPAIFWSVIAGAMGPIGMVVGPPIRRWCVPTGPRKMLTGFDDDEEDAPSDHKQS
*
Coding >Ophun1|3863
ATGAATCCAGCGCCCTACTTCTGGTCCACGCCCCTCAAGTACTGCCGCTGGGCCTCTCGCGAGCGCCCCGCCATC
TTCTGGTCCGTCATCGCCGGCGCCATGGGTCCCATCGGCATGGTCGTCGGGCCTCCAATCCGCCGCTGGTGCGTT
CCTACCGGCCCGCGAAAGATGCTTACCGGCTTCGACGACGACGAAGAGGATGCGCCGTCAGACCACAAACAATCA
TAA
Transcript >Ophun1|3863
ATGAATCCAGCGCCCTACTTCTGGTCCACGCCCCTCAAGTACTGCCGCTGGGCCTCTCGCGAGCGCCCCGCCATC
TTCTGGTCCGTCATCGCCGGCGCCATGGGTCCCATCGGCATGGTCGTCGGGCCTCCAATCCGCCGCTGGTGCGTT
CCTACCGGCCCGCGAAAGATGCTTACCGGCTTCGACGACGACGAAGAGGATGCGCCGTCAGACCACAAACAATCA
TAA
Gene >Ophun1|3863
ATGAATCCAGCGCCCTACTTCTGGTCCACGCCCCTCAAGTACTGCCGCTGGGCCTCTCGCGAGCGCCCCGCCATC
TTCTGGTCCGTCATCGCCGGCGCCATGGGTCCCATCGGCATGGTCGTCGGGCCTCCAATCCGCCGCTGGTGCGGT
GATGTTGATCCGCCCCTTATTCCCTCTACATATCCTGGTAACGTCTCGACTTTGCTTCCTCCTCTTGCCAACGAC
TCCATCGCCTCGTCTTTCTCATCTCGACTCTCCTGACAACTCTTCAGTTCCTACCGGCCCGCGAAAGATGCTTAC
CGGCTTCGACGACGACGAAGAGGATGCGCCGTCAGACCACAAACAATCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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