© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|3781 |
| Gene name | |
| Location | Contig_34:24405..26321 |
| Strand | - |
| Gene length (bp) | 1916 |
| Transcript length (bp) | 1593 |
| Coding sequence length (bp) | 1593 |
| Protein length (aa) | 531 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.2E-24 | 80 | 474 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.5E-12 | 84 | 235 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94343|YHMA_SCHPO | Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 | 11 | 523 | 4.0E-58 |
| sp|P53389|HOL1_YEAST | Protein HOL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOL1 PE=1 SV=1 | 32 | 515 | 5.0E-43 |
| sp|Q9USN4|YJA1_SCHPO | Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1529.01 PE=3 SV=2 | 10 | 485 | 2.0E-12 |
| sp|O59814|YCT4_SCHPO | Uncharacterized transporter C794.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.04c PE=3 SV=1 | 40 | 515 | 1.0E-09 |
| sp|P38776|YHK8_YEAST | Probable drug/proton antiporter YHK8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHK8 PE=1 SV=1 | 41 | 487 | 3.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94343|YHMA_SCHPO | Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 | 11 | 523 | 4.0E-58 |
| sp|P53389|HOL1_YEAST | Protein HOL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOL1 PE=1 SV=1 | 32 | 515 | 5.0E-43 |
| sp|Q9USN4|YJA1_SCHPO | Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1529.01 PE=3 SV=2 | 10 | 485 | 2.0E-12 |
| sp|O59814|YCT4_SCHPO | Uncharacterized transporter C794.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.04c PE=3 SV=1 | 40 | 515 | 1.0E-09 |
| sp|P38776|YHK8_YEAST | Probable drug/proton antiporter YHK8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHK8 PE=1 SV=1 | 41 | 487 | 3.0E-09 |
| sp|Q07824|TPO1_YEAST | Polyamine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO1 PE=1 SV=1 | 101 | 485 | 1.0E-07 |
| sp|Q9HDX4|MFC1_SCHPO | Uncharacterized transporter mfc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfc1 PE=3 SV=2 | 101 | 515 | 2.0E-07 |
| sp|P38125|DTR1_YEAST | Dityrosine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DTR1 PE=1 SV=1 | 166 | 500 | 2.0E-07 |
| sp|P38227|QDR3_YEAST | Quinidine resistance protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR3 PE=1 SV=2 | 259 | 492 | 5.0E-07 |
| sp|Q12256|TPO4_YEAST | Polyamine transporter 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO4 PE=1 SV=1 | 40 | 212 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 56 | 78 | 22 |
| 2 | 93 | 115 | 22 |
| 3 | 122 | 139 | 17 |
| 4 | 154 | 176 | 22 |
| 5 | 183 | 205 | 22 |
| 6 | 209 | 231 | 22 |
| 7 | 310 | 332 | 22 |
| 8 | 352 | 374 | 22 |
| 9 | 395 | 417 | 22 |
| 10 | 427 | 449 | 22 |
| 11 | 462 | 484 | 22 |
| 12 | 489 | 511 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|3781 MAMSVMSAESEPPPGTVELLAAHGGTSEDGSIVLNPMPSDDPEDPLRWAMWRKCLNYTIIIASSTANFTALSTQP LFWVEMVKDMTKTTLEDLANAQSAQLVGLAIGCIIFMPLANKYGLRSNYIIMMIFSSAAAWWSAYMKTVPELYGS NFLFGIAGSINQTVIAMTINDIWFVHQRGTANGMFFLGMMFGTFLVPIAAGFQSIRDGWRLSYVSLAIALTILLL ITILALEETKFIRPLELEPTIDDKDGIFKLESFESELARGPSNEKPPRNKRGGFDFGFIRRARLQFITKSDESIW RVLYSPIKSWWFPQVLFASIQLGSSICWLVTMGTMSSLLFSAPPYNFDAAGLGYMTLGPFVGAVLGSIYGGYLTD KAIIWLSNRNKGWFEPEMRLWLYPLPALAMAGGLILFGVSAGMGMHFIVPSIGGALFGFGFGAVSDIATGIVLDS FPDIVPQTFVALTFFRNVISMASPFSVVPWFNSMGASNMFIMAGCLSLAVNLLALPMGIWGKKGRAAVAGRYYHL AATVA* |
| Coding | >Ophun1|3781 ATGGCCATGAGCGTGATGTCGGCCGAGTCCGAGCCTCCGCCTGGGACGGTTGAGCTGCTGGCGGCGCATGGCGGG ACCAGCGAGGATGGCAGCATTGTCCTGAACCCTATGCCGTCGGATGACCCTGAGGATCCTCTGAGATGGGCCATG TGGCGCAAGTGTCTCAACTATACCATCATCATTGCTTCGTCGACAGCCAACTTCACCGCTCTCTCAACTCAGCCT CTCTTCTGGGTCGAGATGGTCAAGGACATGACCAAGACAACTCTCGAGGATCTAGCCAACGCTCAATCCGCCCAA CTCGTCGGCCTCGCCATCGGCTGCATCATCTTCATGCCCCTGGCCAACAAGTACGGGCTTCGATCCAACTACATC ATCATGATGATCTTTTCCTCTGCGGCGGCCTGGTGGTCTGCCTACATGAAGACCGTTCCCGAGCTGTACGGGTCG AATTTCCTCTTTGGCATCGCCGGCTCCATCAACCAGACCGTCATCGCCATGACTATCAACGACATCTGGTTCGTC CATCAACGAGGCACCGCCAACGGCATGTTCTTTCTCGGCATGATGTTTGGCACCTTTCTCGTCCCCATTGCCGCC GGCTTTCAGAGCATCAGAGACGGCTGGCGCCTCTCATACGTATCGCTAGCCATAGCTCTCACCATTCTCCTCCTC ATAACCATCCTAGCCCTCGAGGAAACCAAATTCATCCGTCCGTTAGAGCTCGAGCCCACCATCGACGACAAAGAC GGCATATTCAAACTCGAATCATTCGAATCCGAACTCGCCCGAGGCCCCTCCAACGAGAAGCCTCCCAGAAACAAA AGAGGCGGTTTCGACTTTGGCTTCATCCGCAGAGCAAGACTCCAGTTCATCACCAAGTCAGACGAGTCCATCTGG AGGGTCCTCTACTCGCCCATCAAGTCCTGGTGGTTCCCGCAGGTTCTCTTCGCCTCGATACAGCTGGGGTCGAGC ATCTGCTGGCTCGTCACCATGGGAACCATGAGCTCACTCCTCTTCTCCGCTCCGCCCTACAACTTTGACGCTGCT GGGCTGGGATACATGACTCTCGGGCCCTTTGTCGGCGCGGTTCTCGGCTCTATCTACGGCGGCTATCTGACGGAC AAGGCCATCATCTGGCTGTCTAATCGGAACAAGGGCTGGTTCGAGCCCGAGATGCGTCTCTGGCTGTATCCCCTG CCAGCTCTGGCCATGGCCGGAGGCTTGATTCTCTTTGGCGTCTCGGCCGGCATGGGAATGCACTTCATCGTCCCC AGCATCGGAGGAGCCCTCTTCGGCTTCGGCTTCGGCGCCGTCTCCGACATCGCCACCGGCATCGTCCTCGACTCC TTCCCAGACATCGTCCCGCAAACCTTTGTCGCCCTAACCTTCTTCCGCAACGTCATCAGCATGGCCAGCCCCTTT TCCGTCGTGCCCTGGTTTAACTCCATGGGCGCCAGCAACATGTTCATCATGGCTGGTTGTCTGAGTCTCGCCGTC AATCTGCTCGCTCTGCCCATGGGCATCTGGGGTAAGAAGGGCAGGGCTGCGGTGGCTGGCCGCTATTATCACTTG GCCGCGACAGTTGCATAA |
| Transcript | >Ophun1|3781 ATGGCCATGAGCGTGATGTCGGCCGAGTCCGAGCCTCCGCCTGGGACGGTTGAGCTGCTGGCGGCGCATGGCGGG ACCAGCGAGGATGGCAGCATTGTCCTGAACCCTATGCCGTCGGATGACCCTGAGGATCCTCTGAGATGGGCCATG TGGCGCAAGTGTCTCAACTATACCATCATCATTGCTTCGTCGACAGCCAACTTCACCGCTCTCTCAACTCAGCCT CTCTTCTGGGTCGAGATGGTCAAGGACATGACCAAGACAACTCTCGAGGATCTAGCCAACGCTCAATCCGCCCAA CTCGTCGGCCTCGCCATCGGCTGCATCATCTTCATGCCCCTGGCCAACAAGTACGGGCTTCGATCCAACTACATC ATCATGATGATCTTTTCCTCTGCGGCGGCCTGGTGGTCTGCCTACATGAAGACCGTTCCCGAGCTGTACGGGTCG AATTTCCTCTTTGGCATCGCCGGCTCCATCAACCAGACCGTCATCGCCATGACTATCAACGACATCTGGTTCGTC CATCAACGAGGCACCGCCAACGGCATGTTCTTTCTCGGCATGATGTTTGGCACCTTTCTCGTCCCCATTGCCGCC GGCTTTCAGAGCATCAGAGACGGCTGGCGCCTCTCATACGTATCGCTAGCCATAGCTCTCACCATTCTCCTCCTC ATAACCATCCTAGCCCTCGAGGAAACCAAATTCATCCGTCCGTTAGAGCTCGAGCCCACCATCGACGACAAAGAC GGCATATTCAAACTCGAATCATTCGAATCCGAACTCGCCCGAGGCCCCTCCAACGAGAAGCCTCCCAGAAACAAA AGAGGCGGTTTCGACTTTGGCTTCATCCGCAGAGCAAGACTCCAGTTCATCACCAAGTCAGACGAGTCCATCTGG AGGGTCCTCTACTCGCCCATCAAGTCCTGGTGGTTCCCGCAGGTTCTCTTCGCCTCGATACAGCTGGGGTCGAGC ATCTGCTGGCTCGTCACCATGGGAACCATGAGCTCACTCCTCTTCTCCGCTCCGCCCTACAACTTTGACGCTGCT GGGCTGGGATACATGACTCTCGGGCCCTTTGTCGGCGCGGTTCTCGGCTCTATCTACGGCGGCTATCTGACGGAC AAGGCCATCATCTGGCTGTCTAATCGGAACAAGGGCTGGTTCGAGCCCGAGATGCGTCTCTGGCTGTATCCCCTG CCAGCTCTGGCCATGGCCGGAGGCTTGATTCTCTTTGGCGTCTCGGCCGGCATGGGAATGCACTTCATCGTCCCC AGCATCGGAGGAGCCCTCTTCGGCTTCGGCTTCGGCGCCGTCTCCGACATCGCCACCGGCATCGTCCTCGACTCC TTCCCAGACATCGTCCCGCAAACCTTTGTCGCCCTAACCTTCTTCCGCAACGTCATCAGCATGGCCAGCCCCTTT TCCGTCGTGCCCTGGTTTAACTCCATGGGCGCCAGCAACATGTTCATCATGGCTGGTTGTCTGAGTCTCGCCGTC AATCTGCTCGCTCTGCCCATGGGCATCTGGGGTAAGAAGGGCAGGGCTGCGGTGGCTGGCCGCTATTATCACTTG GCCGCGACAGTTGCATAA |
| Gene | >Ophun1|3781 ATGGCCATGAGCGTGATGTCGGCCGAGTCCGAGCCTCCGCCTGGGACGGTTGAGCTGCTGGCGGGTGCGTGCTTT GCCATGATGACGCGGTTCGAGCTGATGGGTTTGTCTCTTCAGCGCATGGCGGGACCAGCGAGGATGGCAGCATTG TCCTGAACCCTATGCCGTCGGATGACCCTGAGGATCCTCTGGTTCGTCATTGATCTCTGGCTGTATCGTTTCTCT TAAACTCACAGGTTTCTAGAGATGGGCCATGTGGCGCAAGTGTCTCAACTATACCATCATCATTGCTTCGTCGAC AGCCAACTTCACCGCGTAAGCCCACTCATGACTGGATACAATCAACAGCAACTTGCTAACAAACAAAAGTCTCTC AACTCAGCCTCTCTTCTGGGTCGAGATGGTCAAGGACATGACCAAGACAACTCTCGAGGATCTAGCCAACGCTCA ATCCGCCCAACTCGTCGGCCTCGCCATCGGCTGCATCATCTTCATGCCCCTGGCCAACAAGTACGGGCTTCGATC CAACTACATCATCATGATGATCTTTTCCTCTGCGGCGGCCTGGTGGTCTGCCTACATGAAGACCGTTCCCGAGCT GTACGGGTCGAATTTCCTCTTTGGCATCGCCGGCTCCATCAACCAGACCGTCATCGCCATGACTGTTCGTCGCCA CTGTTCTCATCTCAATGATTCTTCAACTGACACGTCTTAGATCAACGACATCTGGTTCGTCCATCAACGAGGCAC CGCCAACGGCATGTTCTTTCTCGGCATGATGTTTGGCACCTTTCTCGTCCCCATTGCCGCCGGCTTTCAGAGCAT CAGAGACGGCTGGCGCCTCTCATACGTATCGCTAGCCATAGCTCTCACCATTCTCCTCCTCATAACCATCCTAGC CCTCGAGGAAACCAAATTCATCCGTCCGTTAGAGCTCGAGCCCACCATCGACGACAAAGACGGCATATTCAAACT CGAATCATTCGAATCCGAACTCGCCCGAGGCCCCTCCAACGAGAAGCCTCCCAGAAACAAAAGAGGCGGTTTCGA CTTTGGCTTCATCCGCAGAGCAAGACTCCAGTTCATCACCAAGTCAGACGAGTCCATCTGGAGGGTCCTCTACTC GCCCATCAAGTCCTGGTGGTTCCCGCAGGTTCTCTTCGCCTCGATACAGCTGGGGTCGAGCATCTGCTGGCTCGT CACCATGGGAACCATGAGCTCACTCCTCTTCTCCGCTCCGCCCTACAACTTTGACGCTGCTGGGCTGGGATACAT GACTCTCGGGCCCTTTGTCGGCGCGGTTCTCGGCTCTATCTACGGCGGCTATCTGACGGACAAGGCCATCATCTG GCTGTCTAATCGGAACAAGGGCTGGTTCGAGCCCGAGATGCGTCTCTGGCTGTATCCCCTGCCAGCTCTGGCCAT GGCCGGAGGCTTGATTCTCTTTGGCGTCTCGGCCGGCATGGTGAGTTCTCGTCAACTTCTTTCCCTCCTTGAGCG CTGGAGATCTAACAATGTTCTAGGGAATGCACTTCATCGTCCCCAGCATCGGAGGAGCCCTCTTCGGCTTCGGCT TCGGCGCCGTCTCCGACATCGCCACCGGCATCGTCCTCGACTCCTTCCCAGACGTCCGTCTCAACCCCATCCACA ACGTCCATTGAAGAAAACTGACAGCTCAGCAGATCGTCCCGCAAACCTTTGTCGCCCTAACCTTCTTCCGCAACG TCATCAGCATGGCCAGCCCCTTTTCCGTCGTGCCCTGGTTTAACTCCATGGGCGCCAGCAACATGTTCATCATGG CTGGTTGTCTGAGTCTCGCCGTCAATCTGCTCGCTCTGCCCATGGGCATCTGGGGTAAGAAGGGCAGGGCTGCGG TGGCTGGCCGCTATTATCACTTGGCCGCGACAGTTGCATAA |