Protein ID | Ophun1|3768 |
Gene name | |
Location | Contig_339:16756..18496 |
Strand | - |
Gene length (bp) | 1740 |
Transcript length (bp) | 1623 |
Coding sequence length (bp) | 1623 |
Protein length (aa) | 541 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF15406 | PH_6 | Pleckstrin homology domain | 1.3E-40 | 83 | 188 |
Orthofinder run ID | 4 |
Orthogroup | 2769 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|3768 MAEEQKPTVDVPEAVKTDVPAVEQPAASEPVATAESKLADESKPAETTEAAEATKTEAKKEEAKAVEEGYLAHKA QGASFPKNLIPTKEFFFFGSDAVEPKHLAQYQKSEKSSDVAHDNIAWASHTGKGLLFLGDKKAPHGVINLANATE PEVDGSHKFYFTSKGNKHSFKANSTPERDSWIAQLKLKIAEAKELASNVTESETYKKTLETFKPVPATAAPKEEK PTEDAAKPEESAQPEDAPKEADTPKDEVKDEEPKRRSASRKRASFFAFGGGKKDEKKDEAKADAAPAVAAAAAAA EPATETVEAPAAEAAAPATEETKAVEEATPAESPKERQAPSKRNSFFGGVFSKKEKKTTEAKPVEESAEAATESE LPSTDATAPVIPPVESTTPLAVDVSNPATVPTENIETAPATTSEVKKDVKEKRKSSLPFAFGKRDKSPVPGEGDD KDKAGMSAFSKLRATIKGKSAAKPEEKLTEESVKDEAAAAATSKDTPAAATDAVKETTEVAPEASAAATTEPENK PENVASATPAVTAAA* |
Coding | >Ophun1|3768 ATGGCCGAGGAACAGAAGCCCACCGTCGACGTGCCGGAAGCCGTCAAGACCGACGTTCCAGCTGTCGAACAGCCT GCTGCTTCCGAGCCCGTTGCTACCGCCGAGTCGAAGCTTGCCGACGAGTCTAAGCCCGCTGAGACGACCGAGGCC GCCGAAGCTACCAAGACTGAGGCCAAGAAGGAAGAGGCCAAGGCTGTTGAGGAGGGCTACCTCGCTCACAAGGCT CAGGGCGCCAGCTTCCCCAAGAACCTGATTCCCACCAAGGAGTTTTTCTTCTTCGGCTCCGATGCTGTGGAGCCC AAGCATCTGGCTCAGTACCAAAAGTCCGAGAAGTCGTCCGATGTCGCCCATGACAACATCGCTTGGGCTTCTCAC ACCGGCAAGGGTCTTCTCTTCCTCGGCGACAAGAAGGCTCCCCACGGTGTGATCAACTTGGCCAACGCCACCGAG CCCGAAGTCGATGGCTCTCACAAGTTCTACTTCACCTCCAAGGGAAACAAGCACAGCTTCAAGGCGAACTCTACC CCCGAGCGCGACAGCTGGATCGCCCAGCTCAAGCTCAAGATTGCCGAGGCTAAGGAGCTTGCCTCCAACGTGACC GAGTCCGAGACATACAAGAAGACGCTCGAGACCTTCAAGCCCGTTCCGGCTACCGCGGCCCCCAAGGAGGAGAAG CCCACCGAGGACGCTGCCAAGCCTGAAGAGTCTGCTCAGCCCGAAGATGCGCCCAAGGAGGCCGACACTCCCAAG GACGAAGTCAAGGACGAGGAACCCAAGCGTCGCTCTGCTAGCCGCAAGCGCGCTTCTTTCTTCGCCTTTGGCGGC GGTAAGAAGGACGAGAAGAAGGACGAGGCCAAGGCCGATGCTGCTCCCGCCGTCGCTGCGGCCGCTGCGGCCGCT GAGCCCGCCACCGAGACCGTGGAGGCTCCGGCTGCCGAAGCTGCCGCCCCTGCTACCGAAGAGACCAAGGCTGTC GAGGAGGCCACTCCCGCCGAGAGCCCCAAGGAGAGGCAGGCTCCCTCGAAGCGCAACAGCTTCTTCGGCGGCGTC TTCTCCAAGAAGGAGAAGAAGACGACCGAAGCCAAGCCGGTTGAAGAGTCTGCCGAGGCCGCCACCGAGAGCGAG CTTCCCTCCACCGACGCTACCGCCCCCGTGATTCCCCCGGTCGAGTCCACTACGCCCCTCGCTGTCGATGTCTCC AACCCCGCCACCGTCCCTACTGAGAACATTGAGACCGCCCCCGCCACCACCAGCGAGGTCAAGAAGGACGTCAAG GAGAAGCGCAAGTCGTCGCTGCCCTTCGCCTTTGGCAAGCGTGACAAGTCGCCTGTTCCCGGCGAGGGCGATGAC AAGGACAAGGCTGGCATGAGCGCGTTCTCCAAGCTCCGTGCTACCATCAAGGGCAAGTCCGCCGCCAAGCCTGAG GAGAAGCTCACCGAGGAGTCGGTCAAGGACGAAGCCGCTGCCGCCGCCACGTCCAAAGACACCCCGGCCGCCGCT ACCGACGCCGTCAAGGAGACGACGGAGGTTGCCCCCGAGGCCTCGGCAGCCGCCACGACCGAGCCTGAGAACAAG CCCGAAAACGTCGCGTCTGCTACCCCTGCCGTCACGGCGGCCGCCTAG |
Transcript | >Ophun1|3768 ATGGCCGAGGAACAGAAGCCCACCGTCGACGTGCCGGAAGCCGTCAAGACCGACGTTCCAGCTGTCGAACAGCCT GCTGCTTCCGAGCCCGTTGCTACCGCCGAGTCGAAGCTTGCCGACGAGTCTAAGCCCGCTGAGACGACCGAGGCC GCCGAAGCTACCAAGACTGAGGCCAAGAAGGAAGAGGCCAAGGCTGTTGAGGAGGGCTACCTCGCTCACAAGGCT CAGGGCGCCAGCTTCCCCAAGAACCTGATTCCCACCAAGGAGTTTTTCTTCTTCGGCTCCGATGCTGTGGAGCCC AAGCATCTGGCTCAGTACCAAAAGTCCGAGAAGTCGTCCGATGTCGCCCATGACAACATCGCTTGGGCTTCTCAC ACCGGCAAGGGTCTTCTCTTCCTCGGCGACAAGAAGGCTCCCCACGGTGTGATCAACTTGGCCAACGCCACCGAG CCCGAAGTCGATGGCTCTCACAAGTTCTACTTCACCTCCAAGGGAAACAAGCACAGCTTCAAGGCGAACTCTACC CCCGAGCGCGACAGCTGGATCGCCCAGCTCAAGCTCAAGATTGCCGAGGCTAAGGAGCTTGCCTCCAACGTGACC GAGTCCGAGACATACAAGAAGACGCTCGAGACCTTCAAGCCCGTTCCGGCTACCGCGGCCCCCAAGGAGGAGAAG CCCACCGAGGACGCTGCCAAGCCTGAAGAGTCTGCTCAGCCCGAAGATGCGCCCAAGGAGGCCGACACTCCCAAG GACGAAGTCAAGGACGAGGAACCCAAGCGTCGCTCTGCTAGCCGCAAGCGCGCTTCTTTCTTCGCCTTTGGCGGC GGTAAGAAGGACGAGAAGAAGGACGAGGCCAAGGCCGATGCTGCTCCCGCCGTCGCTGCGGCCGCTGCGGCCGCT GAGCCCGCCACCGAGACCGTGGAGGCTCCGGCTGCCGAAGCTGCCGCCCCTGCTACCGAAGAGACCAAGGCTGTC GAGGAGGCCACTCCCGCCGAGAGCCCCAAGGAGAGGCAGGCTCCCTCGAAGCGCAACAGCTTCTTCGGCGGCGTC TTCTCCAAGAAGGAGAAGAAGACGACCGAAGCCAAGCCGGTTGAAGAGTCTGCCGAGGCCGCCACCGAGAGCGAG CTTCCCTCCACCGACGCTACCGCCCCCGTGATTCCCCCGGTCGAGTCCACTACGCCCCTCGCTGTCGATGTCTCC AACCCCGCCACCGTCCCTACTGAGAACATTGAGACCGCCCCCGCCACCACCAGCGAGGTCAAGAAGGACGTCAAG GAGAAGCGCAAGTCGTCGCTGCCCTTCGCCTTTGGCAAGCGTGACAAGTCGCCTGTTCCCGGCGAGGGCGATGAC AAGGACAAGGCTGGCATGAGCGCGTTCTCCAAGCTCCGTGCTACCATCAAGGGCAAGTCCGCCGCCAAGCCTGAG GAGAAGCTCACCGAGGAGTCGGTCAAGGACGAAGCCGCTGCCGCCGCCACGTCCAAAGACACCCCGGCCGCCGCT ACCGACGCCGTCAAGGAGACGACGGAGGTTGCCCCCGAGGCCTCGGCAGCCGCCACGACCGAGCCTGAGAACAAG CCCGAAAACGTCGCGTCTGCTACCCCTGCCGTCACGGCGGCCGCCTAG |
Gene | >Ophun1|3768 ATGGCCGAGGAACAGAAGCCCACCGTCGACGTGCCGGAAGCCGTCAAGACCGACGTTCCAGCTGTCGAACAGCCT GCTGCTTCCGAGCCCGTTGCTACCGCCGAGTCGAAGCTTGCCGACGAGTCTAAGCCCGCTGAGACGACCGAGGCC GCCGAAGCTACCAAGACTGAGGCCAAGAAGGAAGAGGCCAAGGCTGTTGAGGAGGGCTACCTCGCTCACAAGGCT CAGGGCGCCAGCTTCCCCAAGTCAGTCTTCCCCAGCACCGTTTCACGCTTACATCTCAACATCACGCTAATAATT TCTCAGGAACCTGATTCCCACCAAGGAGTTTTTCTTCTTCGGCTCCGATGCTGTGGAGCCCAAGCATCTGGCTCA GTACCAAAAGTCCGAGAAGTCGTCCGATGTCGCCCATGACAACATCGCTTGGGCTTCTCACACCGGCAAGGGTCT TCTCTTCCTCGGCGACAAGAAGGCTCCCCACGGTGTGATCAACTTGGTAAGCGTCTTGATCCAAGCATCGTCCTA CCATGTCGCTAACACGCTTTTCTTTAGGCCAACGCCACCGAGCCCGAAGTCGATGGCTCTCACAAGTTCTACTTC ACCTCCAAGGGAAACAAGCACAGCTTCAAGGCGAACTCTACCCCCGAGCGCGACAGCTGGATCGCCCAGCTCAAG CTCAAGATTGCCGAGGCTAAGGAGCTTGCCTCCAACGTGACCGAGTCCGAGACATACAAGAAGACGCTCGAGACC TTCAAGCCCGTTCCGGCTACCGCGGCCCCCAAGGAGGAGAAGCCCACCGAGGACGCTGCCAAGCCTGAAGAGTCT GCTCAGCCCGAAGATGCGCCCAAGGAGGCCGACACTCCCAAGGACGAAGTCAAGGACGAGGAACCCAAGCGTCGC TCTGCTAGCCGCAAGCGCGCTTCTTTCTTCGCCTTTGGCGGCGGTAAGAAGGACGAGAAGAAGGACGAGGCCAAG GCCGATGCTGCTCCCGCCGTCGCTGCGGCCGCTGCGGCCGCTGAGCCCGCCACCGAGACCGTGGAGGCTCCGGCT GCCGAAGCTGCCGCCCCTGCTACCGAAGAGACCAAGGCTGTCGAGGAGGCCACTCCCGCCGAGAGCCCCAAGGAG AGGCAGGCTCCCTCGAAGCGCAACAGCTTCTTCGGCGGCGTCTTCTCCAAGAAGGAGAAGAAGACGACCGAAGCC AAGCCGGTTGAAGAGTCTGCCGAGGCCGCCACCGAGAGCGAGCTTCCCTCCACCGACGCTACCGCCCCCGTGATT CCCCCGGTCGAGTCCACTACGCCCCTCGCTGTCGATGTCTCCAACCCCGCCACCGTCCCTACTGAGAACATTGAG ACCGCCCCCGCCACCACCAGCGAGGTCAAGAAGGACGTCAAGGAGAAGCGCAAGTCGTCGCTGCCCTTCGCCTTT GGCAAGCGTGACAAGTCGCCTGTTCCCGGCGAGGGCGATGACAAGGACAAGGCTGGCATGAGCGCGTTCTCCAAG CTCCGTGCTACCATCAAGGGCAAGTCCGCCGCCAAGCCTGAGGAGAAGCTCACCGAGGAGTCGGTCAAGGACGAA GCCGCTGCCGCCGCCACGTCCAAAGACACCCCGGCCGCCGCTACCGACGCCGTCAAGGAGACGACGGAGGTTGCC CCCGAGGCCTCGGCAGCCGCCACGACCGAGCCTGAGAACAAGCCCGAAAACGTCGCGTCTGCTACCCCTGCCGTC ACGGCGGCCGCCTAG |