Protein ID | Ophun1|3710 |
Gene name | |
Location | Contig_331:11142..11460 |
Strand | + |
Gene length (bp) | 318 |
Transcript length (bp) | 318 |
Coding sequence length (bp) | 318 |
Protein length (aa) | 106 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01494 | FAD_binding_3 | FAD binding domain | 5.5E-06 | 23 | 89 |
PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 1.3E-04 | 24 | 54 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9F131|3HBH1_PSEAC | 3-hydroxybenzoate 6-hydroxylase 1 OS=Pseudomonas alcaligenes GN=xlnD PE=1 SV=1 | 23 | 76 | 7.0E-09 |
GO Term | Description | Terminal node |
---|---|---|
GO:0071949 | FAD binding | Yes |
GO:0097159 | organic cyclic compound binding | No |
GO:0003674 | molecular_function | No |
GO:0000166 | nucleotide binding | No |
GO:0050660 | flavin adenine dinucleotide binding | No |
GO:0036094 | small molecule binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043167 | ion binding | No |
GO:0005488 | binding | No |
GO:0043168 | anion binding | No |
GO:1901265 | nucleoside phosphate binding | No |
Orthofinder run ID | 4 |
Orthogroup | 812 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|3710 MLPDAATLPLFASCRAPRCVRFVIAGAGIAGLTTGLGLRLTGHDVTILDQASDLDEAGAGIQIAPNATRVLARLG VLDQVVEDADVLERISIRQAPFPRWNKPGS* |
Coding | >Ophun1|3710 ATGCTCCCCGACGCTGCGACCCTCCCGTTGTTCGCCTCTTGTCGAGCCCCTCGCTGCGTCCGCTTCGTGATAGCT GGTGCCGGTATTGCGGGACTCACCACGGGCCTCGGTCTCCGATTGACGGGCCACGATGTCACCATCCTCGACCAA GCCTCTGACCTAGACGAGGCCGGCGCCGGCATTCAGATTGCGCCCAATGCCACTCGCGTCCTCGCTCGTCTCGGC GTTCTCGATCAAGTCGTAGAGGATGCCGACGTGCTCGAGCGCATATCCATACGGCAAGCTCCCTTTCCTCGATGG AATAAACCTGGCTCATGA |
Transcript | >Ophun1|3710 ATGCTCCCCGACGCTGCGACCCTCCCGTTGTTCGCCTCTTGTCGAGCCCCTCGCTGCGTCCGCTTCGTGATAGCT GGTGCCGGTATTGCGGGACTCACCACGGGCCTCGGTCTCCGATTGACGGGCCACGATGTCACCATCCTCGACCAA GCCTCTGACCTAGACGAGGCCGGCGCCGGCATTCAGATTGCGCCCAATGCCACTCGCGTCCTCGCTCGTCTCGGC GTTCTCGATCAAGTCGTAGAGGATGCCGACGTGCTCGAGCGCATATCCATACGGCAAGCTCCCTTTCCTCGATGG AATAAACCTGGCTCATGA |
Gene | >Ophun1|3710 ATGCTCCCCGACGCTGCGACCCTCCCGTTGTTCGCCTCTTGTCGAGCCCCTCGCTGCGTCCGCTTCGTGATAGCT GGTGCCGGTATTGCGGGACTCACCACGGGCCTCGGTCTCCGATTGACGGGCCACGATGTCACCATCCTCGACCAA GCCTCTGACCTAGACGAGGCCGGCGCCGGCATTCAGATTGCGCCCAATGCCACTCGCGTCCTCGCTCGTCTCGGC GTTCTCGATCAAGTCGTAGAGGATGCCGACGTGCTCGAGCGCATATCCATACGGCAAGCTCCCTTTCCTCGATGG AATAAACCTGGCTCATGA |