Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3708
Gene name
LocationContig_331:4759..6127
Strand-
Gene length (bp)1368
Transcript length (bp)1368
Coding sequence length (bp)1368
Protein length (aa) 456

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03798 TRAM_LAG1_CLN8 TLC domain 5.3E-34 198 403
PF08390 TRAM1 TRAM1-like protein 4.2E-22 125 195

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O59735|LAC1_SCHPO Sphingosine N-acyltransferase lac1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lac1 PE=1 SV=2 63 407 1.0E-95
sp|A6ZSP9|LAG1_YEAS7 Sphingosine N-acyltransferase LAG1 OS=Saccharomyces cerevisiae (strain YJM789) GN=LAG1 PE=3 SV=1 9 425 3.0E-88
sp|P38703|LAG1_YEAST Sphingosine N-acyltransferase LAG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LAG1 PE=1 SV=1 9 425 5.0E-88
sp|P28496|LAC1_YEAST Sphingosine N-acyltransferase LAC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LAC1 PE=1 SV=2 51 415 7.0E-79
sp|A6ZZV7|LAC1_YEAS7 Sphingosine N-acyltransferase LAC1 OS=Saccharomyces cerevisiae (strain YJM789) GN=LAC1 PE=3 SV=1 51 415 7.0E-79
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Swissprot ID Swissprot Description Start End E-value
sp|O59735|LAC1_SCHPO Sphingosine N-acyltransferase lac1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lac1 PE=1 SV=2 63 407 1.0E-95
sp|A6ZSP9|LAG1_YEAS7 Sphingosine N-acyltransferase LAG1 OS=Saccharomyces cerevisiae (strain YJM789) GN=LAG1 PE=3 SV=1 9 425 3.0E-88
sp|P38703|LAG1_YEAST Sphingosine N-acyltransferase LAG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LAG1 PE=1 SV=1 9 425 5.0E-88
sp|P28496|LAC1_YEAST Sphingosine N-acyltransferase LAC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LAC1 PE=1 SV=2 51 415 7.0E-79
sp|A6ZZV7|LAC1_YEAS7 Sphingosine N-acyltransferase LAC1 OS=Saccharomyces cerevisiae (strain YJM789) GN=LAC1 PE=3 SV=1 51 415 7.0E-79
sp|P78970|LAG1_SCHPO Sphingosine N-acyltransferase lag1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lag1 PE=1 SV=2 58 433 4.0E-44
sp|Q9D6J1|CERS4_MOUSE Ceramide synthase 4 OS=Mus musculus GN=Cers4 PE=1 SV=1 187 436 2.0E-21
sp|Q924Z4|CERS2_MOUSE Ceramide synthase 2 OS=Mus musculus GN=Cers2 PE=1 SV=1 198 420 3.0E-18
sp|Q3ZBF8|CERS2_BOVIN Ceramide synthase 2 OS=Bos taurus GN=CERS2 PE=2 SV=1 216 420 9.0E-18
sp|Q5E9R6|CERS4_BOVIN Ceramide synthase 4 OS=Bos taurus GN=CERS4 PE=2 SV=1 187 424 2.0E-17
sp|Q96G23|CERS2_HUMAN Ceramide synthase 2 OS=Homo sapiens GN=CERS2 PE=1 SV=1 216 420 3.0E-17
sp|Q84QC0|ASCL3_ORYSJ ASC1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os03g0264000 PE=2 SV=1 193 425 5.0E-17
sp|G5ED45|HYL1_CAEEL Ceramide synthase hyl-1 OS=Caenorhabditis elegans GN=hyl-1 PE=1 SV=1 189 425 1.0E-15
sp|Q6ZMG9|CERS6_HUMAN Ceramide synthase 6 OS=Homo sapiens GN=CERS6 PE=1 SV=1 187 418 9.0E-15
sp|Q9LJK3|LAG12_ARATH LAG1 longevity assurance homolog 2 OS=Arabidopsis thaliana GN=LAG2 PE=1 SV=1 184 424 7.0E-14
sp|Q6NQI8|LAG13_ARATH LAG1 longevity assurance homolog 3 OS=Arabidopsis thaliana GN=At1g13580 PE=2 SV=2 193 426 1.0E-13
sp|Q8C172|CERS6_MOUSE Ceramide synthase 6 OS=Mus musculus GN=Cers6 PE=1 SV=1 187 409 5.0E-13
sp|Q6YWS8|ASCL2_ORYSJ ASC1-like protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0728300 PE=3 SV=2 192 430 8.0E-13
sp|Q8N5B7|CERS5_HUMAN Ceramide synthase 5 OS=Homo sapiens GN=CERS5 PE=2 SV=1 187 418 2.0E-12
sp|Q6EUN0|ASCL1_ORYSJ ASC1-like protein 1 OS=Oryza sativa subsp. japonica GN=Os02g0581300 PE=2 SV=1 192 426 2.0E-12
sp|Q9D6K9|CERS5_MOUSE Ceramide synthase 5 OS=Mus musculus GN=Cers5 PE=1 SV=1 187 418 3.0E-12
sp|Q9HA82|CERS4_HUMAN Ceramide synthase 4 OS=Homo sapiens GN=CERS4 PE=1 SV=2 183 449 3.0E-12
sp|Q9LDF2|LAG11_ARATH LAG1 longevity assurance homolog 1 OS=Arabidopsis thaliana GN=LAG1 PE=2 SV=1 195 426 5.0E-12
sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein OS=Solanum lycopersicum PE=2 SV=1 193 426 1.0E-11
sp|Q7Z139|HYL2_CAEEL Ceramide synthase hyl-2 OS=Caenorhabditis elegans GN=hyl-2 PE=1 SV=1 184 424 5.0E-11
sp|P27545|CERS1_MOUSE Ceramide synthase 1 OS=Mus musculus GN=Cers1 PE=1 SV=1 111 431 3.0E-10
sp|Q8IU89|CERS3_HUMAN Ceramide synthase 3 OS=Homo sapiens GN=CERS3 PE=1 SV=2 186 419 2.0E-08
sp|Q9M6A3|ASC1_SOLLC Protein ASC1 OS=Solanum lycopersicum GN=Asc-1 PE=2 SV=2 189 424 5.0E-08
sp|Q1A3B0|CERS3_MOUSE Ceramide synthase 3 OS=Mus musculus GN=Cers3 PE=1 SV=1 183 421 3.0E-07
sp|Q15035|TRAM2_HUMAN Translocating chain-associated membrane protein 2 OS=Homo sapiens GN=TRAM2 PE=1 SV=1 142 257 2.0E-06
sp|Q91V04|TRAM1_MOUSE Translocating chain-associated membrane protein 1 OS=Mus musculus GN=Tram1 PE=1 SV=3 127 257 5.0E-06
sp|Q6DED0|TR1L1_XENLA Translocating chain-associated membrane protein 1-like 1 OS=Xenopus laevis GN=tram1l1 PE=2 SV=1 151 323 8.0E-06
sp|Q8QZR0|TR1L1_MOUSE Translocating chain-associated membrane protein 1-like 1 OS=Mus musculus GN=Tram1l1 PE=2 SV=1 147 257 9.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.45

Transmembrane Domains

Domain # Start End Length
1 100 117 17
2 163 185 22
3 206 228 22
4 248 267 19
5 283 305 22
6 320 342 22
7 382 404 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3708
MTEPFPLLNTSADQLHNVQVERRRSASRGGGGVAVGDGSVVKEEAIMADAAAAAAMALSNANPSSAPMTTTTTTT
KRLSKRRRARGLASRLRQAMMRKTYILPAFIITAALAAYALGPRTNNPLAPFIFLSYRVPDSSSSSSSSSSSSSP
AMYGKGPADMAFVAFYTIVLSFAREFVMLELLRPLARRARLSRAKQARFMEQMYTALYFGFLGPLGILVMSTTPV
WYFDTRGMYEGFPHKTHDALAKFYYLFQAAYWAQQAIVLLLGMEKPRKDFKELVGHHIVSLALIGLSYRFHFTYI
GIAVYTTHDISDFFLATSKVLNYIDHPLVGPYFFLFMCVWIYMRHYINMRIIISLFTQFRSVGPFSHDWFPNMYK
NVLSQYVTILLLSCLQALNLFWLFYIVRIAYRFVVHNIAEDDRSDDDEEHKPAPPVDDTPRAISTALPSSPSPAQ
AQRRQ*
Coding >Ophun1|3708
ATGACGGAGCCTTTCCCCCTGCTCAACACTTCAGCCGATCAGCTTCACAACGTCCAGGTCGAGCGCCGGCGCAGT
GCAAGTCGTGGTGGTGGTGGCGTTGCTGTTGGAGACGGGTCTGTCGTTAAGGAGGAGGCCATCATGGCTGATGCT
GCTGCTGCTGCCGCCATGGCCTTGTCCAATGCGAATCCTTCTTCTGCCCCGATGACGACGACGACGACGACGACG
AAGCGTCTCTCCAAGAGGAGGCGGGCTCGAGGCCTCGCTTCCCGTCTTCGACAGGCCATGATGCGAAAGACGTAC
ATCCTCCCAGCCTTCATCATCACCGCCGCCCTGGCAGCCTACGCCCTCGGCCCGCGAACAAACAACCCGCTCGCC
CCCTTCATCTTCCTCTCCTACCGCGTCCCCGACTCCTCCTCCTCCTCCTCCAGCAGCAGCAGCAGCAGCAGTCCG
GCAATGTACGGCAAGGGCCCCGCAGACATGGCCTTCGTCGCCTTCTACACCATAGTCCTCTCCTTCGCCCGCGAA
TTCGTCATGCTCGAACTCCTCCGGCCCCTCGCCCGCCGAGCCCGCCTCTCCCGCGCCAAACAGGCCCGCTTCATG
GAACAGATGTACACGGCCCTCTACTTCGGCTTCCTCGGTCCCCTGGGCATCCTCGTCATGAGCACCACGCCCGTC
TGGTACTTCGACACCAGGGGCATGTACGAGGGCTTCCCCCACAAGACGCATGACGCCCTCGCAAAGTTCTACTAC
CTCTTCCAAGCCGCCTACTGGGCCCAGCAAGCCATCGTCCTCCTCTTGGGCATGGAGAAGCCCCGCAAGGACTTC
AAGGAACTCGTCGGCCATCACATCGTCAGCCTCGCCCTCATAGGCCTCAGCTACCGCTTCCACTTCACCTACATC
GGCATCGCCGTCTACACCACCCACGACATCAGCGACTTCTTCCTCGCCACCTCAAAGGTCCTCAACTACATCGAC
CACCCCCTCGTCGGCCCCTACTTCTTCCTCTTCATGTGCGTCTGGATCTACATGCGCCACTACATCAACATGCGC
ATCATCATCTCCCTCTTCACCCAGTTCCGCTCCGTCGGCCCCTTTTCCCACGACTGGTTCCCCAACATGTACAAG
AACGTCCTCAGCCAGTACGTCACCATCCTCCTGCTCTCCTGTCTGCAGGCCCTCAACCTCTTCTGGCTCTTCTAC
ATCGTCCGCATCGCCTACCGCTTCGTCGTCCACAACATCGCAGAGGACGACCGCTCAGACGACGACGAGGAACAC
AAGCCTGCTCCCCCCGTCGACGACACCCCGCGAGCCATCTCCACCGCCCTCCCTTCCTCCCCTTCGCCGGCACAG
GCGCAGCGGAGACAGTAA
Transcript >Ophun1|3708
ATGACGGAGCCTTTCCCCCTGCTCAACACTTCAGCCGATCAGCTTCACAACGTCCAGGTCGAGCGCCGGCGCAGT
GCAAGTCGTGGTGGTGGTGGCGTTGCTGTTGGAGACGGGTCTGTCGTTAAGGAGGAGGCCATCATGGCTGATGCT
GCTGCTGCTGCCGCCATGGCCTTGTCCAATGCGAATCCTTCTTCTGCCCCGATGACGACGACGACGACGACGACG
AAGCGTCTCTCCAAGAGGAGGCGGGCTCGAGGCCTCGCTTCCCGTCTTCGACAGGCCATGATGCGAAAGACGTAC
ATCCTCCCAGCCTTCATCATCACCGCCGCCCTGGCAGCCTACGCCCTCGGCCCGCGAACAAACAACCCGCTCGCC
CCCTTCATCTTCCTCTCCTACCGCGTCCCCGACTCCTCCTCCTCCTCCTCCAGCAGCAGCAGCAGCAGCAGTCCG
GCAATGTACGGCAAGGGCCCCGCAGACATGGCCTTCGTCGCCTTCTACACCATAGTCCTCTCCTTCGCCCGCGAA
TTCGTCATGCTCGAACTCCTCCGGCCCCTCGCCCGCCGAGCCCGCCTCTCCCGCGCCAAACAGGCCCGCTTCATG
GAACAGATGTACACGGCCCTCTACTTCGGCTTCCTCGGTCCCCTGGGCATCCTCGTCATGAGCACCACGCCCGTC
TGGTACTTCGACACCAGGGGCATGTACGAGGGCTTCCCCCACAAGACGCATGACGCCCTCGCAAAGTTCTACTAC
CTCTTCCAAGCCGCCTACTGGGCCCAGCAAGCCATCGTCCTCCTCTTGGGCATGGAGAAGCCCCGCAAGGACTTC
AAGGAACTCGTCGGCCATCACATCGTCAGCCTCGCCCTCATAGGCCTCAGCTACCGCTTCCACTTCACCTACATC
GGCATCGCCGTCTACACCACCCACGACATCAGCGACTTCTTCCTCGCCACCTCAAAGGTCCTCAACTACATCGAC
CACCCCCTCGTCGGCCCCTACTTCTTCCTCTTCATGTGCGTCTGGATCTACATGCGCCACTACATCAACATGCGC
ATCATCATCTCCCTCTTCACCCAGTTCCGCTCCGTCGGCCCCTTTTCCCACGACTGGTTCCCCAACATGTACAAG
AACGTCCTCAGCCAGTACGTCACCATCCTCCTGCTCTCCTGTCTGCAGGCCCTCAACCTCTTCTGGCTCTTCTAC
ATCGTCCGCATCGCCTACCGCTTCGTCGTCCACAACATCGCAGAGGACGACCGCTCAGACGACGACGAGGAACAC
AAGCCTGCTCCCCCCGTCGACGACACCCCGCGAGCCATCTCCACCGCCCTCCCTTCCTCCCCTTCGCCGGCACAG
GCGCAGCGGAGACAGTAA
Gene >Ophun1|3708
ATGACGGAGCCTTTCCCCCTGCTCAACACTTCAGCCGATCAGCTTCACAACGTCCAGGTCGAGCGCCGGCGCAGT
GCAAGTCGTGGTGGTGGTGGCGTTGCTGTTGGAGACGGGTCTGTCGTTAAGGAGGAGGCCATCATGGCTGATGCT
GCTGCTGCTGCCGCCATGGCCTTGTCCAATGCGAATCCTTCTTCTGCCCCGATGACGACGACGACGACGACGACG
AAGCGTCTCTCCAAGAGGAGGCGGGCTCGAGGCCTCGCTTCCCGTCTTCGACAGGCCATGATGCGAAAGACGTAC
ATCCTCCCAGCCTTCATCATCACCGCCGCCCTGGCAGCCTACGCCCTCGGCCCGCGAACAAACAACCCGCTCGCC
CCCTTCATCTTCCTCTCCTACCGCGTCCCCGACTCCTCCTCCTCCTCCTCCAGCAGCAGCAGCAGCAGCAGTCCG
GCAATGTACGGCAAGGGCCCCGCAGACATGGCCTTCGTCGCCTTCTACACCATAGTCCTCTCCTTCGCCCGCGAA
TTCGTCATGCTCGAACTCCTCCGGCCCCTCGCCCGCCGAGCCCGCCTCTCCCGCGCCAAACAGGCCCGCTTCATG
GAACAGATGTACACGGCCCTCTACTTCGGCTTCCTCGGTCCCCTGGGCATCCTCGTCATGAGCACCACGCCCGTC
TGGTACTTCGACACCAGGGGCATGTACGAGGGCTTCCCCCACAAGACGCATGACGCCCTCGCAAAGTTCTACTAC
CTCTTCCAAGCCGCCTACTGGGCCCAGCAAGCCATCGTCCTCCTCTTGGGCATGGAGAAGCCCCGCAAGGACTTC
AAGGAACTCGTCGGCCATCACATCGTCAGCCTCGCCCTCATAGGCCTCAGCTACCGCTTCCACTTCACCTACATC
GGCATCGCCGTCTACACCACCCACGACATCAGCGACTTCTTCCTCGCCACCTCAAAGGTCCTCAACTACATCGAC
CACCCCCTCGTCGGCCCCTACTTCTTCCTCTTCATGTGCGTCTGGATCTACATGCGCCACTACATCAACATGCGC
ATCATCATCTCCCTCTTCACCCAGTTCCGCTCCGTCGGCCCCTTTTCCCACGACTGGTTCCCCAACATGTACAAG
AACGTCCTCAGCCAGTACGTCACCATCCTCCTGCTCTCCTGTCTGCAGGCCCTCAACCTCTTCTGGCTCTTCTAC
ATCGTCCGCATCGCCTACCGCTTCGTCGTCCACAACATCGCAGAGGACGACCGCTCAGACGACGACGAGGAACAC
AAGCCTGCTCCCCCCGTCGACGACACCCCGCGAGCCATCTCCACCGCCCTCCCTTCCTCCCCTTCGCCGGCACAG
GCGCAGCGGAGACAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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