© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|3678 |
| Gene name | |
| Location | Contig_33:8397..9324 |
| Strand | - |
| Gene length (bp) | 927 |
| Transcript length (bp) | 792 |
| Coding sequence length (bp) | 792 |
| Protein length (aa) | 264 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 3.6E-45 | 39 | 252 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 36 | 58 | 22 |
| 2 | 84 | 106 | 22 |
| 3 | 121 | 140 | 19 |
| 4 | 214 | 231 | 17 |
| 5 | 236 | 258 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|3678 MGNQSVPDSETEAAPLKRRRGFVGRSLENLDVRLAYLPLLVCCFVSGLTDGTIYNAYGTFVSMQTGNTIFVALGT SGQNNKPYGWARSLCSIVFFVLGSFTFARLYHLLGGRRRGTLTLSFFTQAVIVLVAAAMVQAGVVDGRYPSKRSP SDVDFKELLIIALLSFQAAGQLVSSRSLGVGEVPTVVVTSMLSDLVSDRALFSLAANEKRTRRFWAFVLTLIGGI CGGWISKAVHAVYPSLWTVAGIKFLLAGVWALWKAEGG* |
| Coding | >Ophun1|3678 ATGGGGAACCAGTCTGTTCCGGACTCGGAGACGGAGGCGGCACCGCTGAAGCGGAGACGTGGCTTCGTGGGGAGA AGTCTTGAGAATCTCGATGTTCGGTTGGCGTACTTGCCGCTGCTGGTCTGTTGCTTCGTCTCTGGATTGACGGAC GGGACGATTTACAATGCTTATGGGACGTTTGTGTCGATGCAGACTGGAAACACCATCTTCGTCGCGCTCGGGACA TCAGGTCAGAACAACAAGCCCTACGGCTGGGCCCGCTCCCTCTGCTCAATCGTCTTCTTTGTTCTCGGCTCCTTT ACCTTTGCACGTCTCTATCACCTCCTGGGCGGCAGAAGACGAGGCACCCTGACGCTCTCCTTTTTCACACAAGCC GTCATCGTCCTCGTCGCCGCCGCCATGGTCCAAGCAGGCGTCGTCGACGGTAGGTACCCTTCCAAGCGGTCGCCC TCGGACGTCGACTTCAAGGAGCTCCTCATCATCGCGCTGCTGAGCTTCCAGGCGGCCGGGCAACTCGTCAGCAGT CGGAGCCTGGGCGTGGGCGAGGTGCCGACGGTGGTGGTGACGAGCATGCTGTCTGATCTGGTGTCTGACCGGGCG CTGTTTTCGCTGGCGGCTAATGAGAAGCGGACTCGTCGGTTTTGGGCCTTTGTGCTTACTCTTATTGGGGGTATT TGCGGTGGTTGGATCTCCAAGGCGGTCCACGCTGTTTATCCTTCTTTATGGACAGTGGCGGGTATCAAGTTTCTG TTGGCGGGTGTCTGGGCGCTGTGGAAGGCAGAAGGGGGATGA |
| Transcript | >Ophun1|3678 ATGGGGAACCAGTCTGTTCCGGACTCGGAGACGGAGGCGGCACCGCTGAAGCGGAGACGTGGCTTCGTGGGGAGA AGTCTTGAGAATCTCGATGTTCGGTTGGCGTACTTGCCGCTGCTGGTCTGTTGCTTCGTCTCTGGATTGACGGAC GGGACGATTTACAATGCTTATGGGACGTTTGTGTCGATGCAGACTGGAAACACCATCTTCGTCGCGCTCGGGACA TCAGGTCAGAACAACAAGCCCTACGGCTGGGCCCGCTCCCTCTGCTCAATCGTCTTCTTTGTTCTCGGCTCCTTT ACCTTTGCACGTCTCTATCACCTCCTGGGCGGCAGAAGACGAGGCACCCTGACGCTCTCCTTTTTCACACAAGCC GTCATCGTCCTCGTCGCCGCCGCCATGGTCCAAGCAGGCGTCGTCGACGGTAGGTACCCTTCCAAGCGGTCGCCC TCGGACGTCGACTTCAAGGAGCTCCTCATCATCGCGCTGCTGAGCTTCCAGGCGGCCGGGCAACTCGTCAGCAGT CGGAGCCTGGGCGTGGGCGAGGTGCCGACGGTGGTGGTGACGAGCATGCTGTCTGATCTGGTGTCTGACCGGGCG CTGTTTTCGCTGGCGGCTAATGAGAAGCGGACTCGTCGGTTTTGGGCCTTTGTGCTTACTCTTATTGGGGGTATT TGCGGTGGTTGGATCTCCAAGGCGGTCCACGCTGTTTATCCTTCTTTATGGACAGTGGCGGGTATCAAGTTTCTG TTGGCGGGTGTCTGGGCGCTGTGGAAGGCAGAAGGGGGATGA |
| Gene | >Ophun1|3678 ATGGGGAACCAGTCTGTTCCGGACTCGGAGACGGAGGCGGCACCGCTGAAGCGGAGACGTGGCTTCGTGGGGAGA AGTCTTGAGAATCTCGATGTTCGGTTGGCGTACTTGCCGCTGCTGGTCTGTTGCTTCGTCTCTGGATTGACGGAC GGGACGATTTACAATGGTGAGATGCGTTCCTTCTCCCCTCCCACCCTCCTTCATACCCTTCGAGTCGAGACTCTA ACGACGTCTTGGCAGCTTATGGGACGTTTGTGTCGATGCAGACTGGTGAGTTGTTCTCTTGGCTGCAGCATCGAG GCCATCGAGACTCATGCCGCGTGGCGACCAGGAAACACCATCTTCGTCGCGCTCGGGACATCAGGTCAGAACAAC AAGCCCTACGGCTGGGCCCGCTCCCTCTGCTCAATCGTCTTCTTTGTTCTCGGCTCCTTTACCTTTGCACGTCTC TATCACCTCCTGGGCGGCAGAAGACGAGGCACCCTGACGCTCTCCTTTTTCACACAAGCCGTCATCGTCCTCGTC GCCGCCGCCATGGTCCAAGCAGGCGTCGTCGACGGTAGGTACCCTTCCAAGCGGTCGCCCTCGGACGTCGACTTC AAGGAGCTCCTCATCATCGCGCTGCTGAGCTTCCAGGCGGCCGGGCAACTCGTCAGCAGTCGGAGCCTGGGCGTG GGCGAGGTGCCGACGGTGGTGGTGACGAGCATGCTGTCTGATCTGGTGTCTGACCGGGCGCTGTTTTCGCTGGCG GCTAATGAGAAGCGGACTCGTCGGTTTTGGGCCTTTGTGCTTACTCTTATTGGGGGTATTTGCGGTGGTTGGATC TCCAAGGCGGTCCACGCTGTTTATCCTTCTTTATGGACAGTGGCGGGTATCAAGTTTCTGTTGGCGGGTGTCTGG GCGCTGTGGAAGGCAGAAGGGGGATGA |