Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3621
Gene name
LocationContig_322:12515..13071
Strand-
Gene length (bp)556
Transcript length (bp)423
Coding sequence length (bp)423
Protein length (aa) 141

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00179 UQ_con Ubiquitin-conjugating enzyme 7.1E-17 29 130

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O74983|MMS2_SCHPO Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spm2 PE=1 SV=1 1 138 1.0E-62
sp|P53152|MMS2_YEAST Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMS2 PE=1 SV=1 1 138 9.0E-60
sp|Q9CAB6|UEV1B_ARATH Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1 2 136 1.0E-55
sp|Q9SVD7|UEV1D_ARATH Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1 2 138 2.0E-55
sp|Q93YP0|UEV1A_ARATH Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1 2 139 2.0E-55
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O74983|MMS2_SCHPO Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spm2 PE=1 SV=1 1 138 1.0E-62
sp|P53152|MMS2_YEAST Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMS2 PE=1 SV=1 1 138 9.0E-60
sp|Q9CAB6|UEV1B_ARATH Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1 2 136 1.0E-55
sp|Q9SVD7|UEV1D_ARATH Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1 2 138 2.0E-55
sp|Q93YP0|UEV1A_ARATH Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1 2 139 2.0E-55
sp|Q9SJ44|UEV1C_ARATH Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1 SV=1 2 138 7.0E-55
sp|Q54D06|UBE2V_DICDI Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=ube2v PE=3 SV=1 1 138 1.0E-54
sp|Q13404|UB2V1_HUMAN Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1 PE=1 SV=2 4 139 4.0E-50
sp|Q3SZ52|UB2V1_BOVIN Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1 PE=2 SV=1 4 139 4.0E-50
sp|Q90879|UB2V1_CHICK Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus GN=UBE2V1 PE=2 SV=2 4 139 4.0E-50
sp|Q9CZY3|UB2V1_MOUSE Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1 PE=1 SV=1 4 139 4.0E-50
sp|Q5F3Z3|UB2V2_CHICK Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus GN=UBE2V2 PE=2 SV=1 4 138 6.0E-50
sp|Q7M767|UB2V2_RAT Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus GN=Ube2v2 PE=1 SV=3 4 138 2.0E-49
sp|Q9D2M8|UB2V2_MOUSE Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus GN=Ube2v2 PE=1 SV=4 4 138 2.0E-49
sp|Q15819|UB2V2_HUMAN Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2 PE=1 SV=4 4 138 7.0E-49
sp|Q3SZ43|UB2V2_BOVIN Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus GN=UBE2V2 PE=2 SV=3 4 138 7.0E-49
sp|Q5R6C9|UB2V2_PONAB Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii GN=UBE2V2 PE=2 SV=1 4 138 7.0E-49
sp|Q5R4Z6|UB2V1_PONAB Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo abelii GN=UBE2V1 PE=2 SV=1 4 139 1.0E-48
sp|Q6PEH5|UB2V2_DANRE Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio rerio GN=ube2v2 PE=2 SV=1 4 139 2.0E-48
sp|Q7ZYP0|UB2V2_XENLA Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenopus laevis GN=ube2v2 PE=2 SV=1 4 138 3.0E-48
sp|O45495|UB2V1_CAEEL Ubiquitin-conjugating enzyme E2 variant 1 OS=Caenorhabditis elegans GN=uev-1 PE=1 SV=1 1 138 8.0E-41
sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=1 SV=2 9 124 6.0E-08
sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1 PE=1 SV=1 9 124 1.0E-07
sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1 9 124 1.0E-07
sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1 9 124 1.0E-07
sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1 9 124 1.0E-07
sp|Q42541|UBC13_ARATH Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1 23 130 1.0E-07
sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1 9 124 2.0E-07
sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1 9 124 3.0E-07
sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1 9 124 3.0E-07
sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1 11 124 3.0E-07
sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=2 SV=1 11 124 3.0E-07
sp|Q9FI61|UBC27_ARATH Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1 1 124 4.0E-07
sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1 9 124 5.0E-07
sp|P35133|UBC10_ARATH Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1 9 124 7.0E-07
sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=Ubc6 PE=2 SV=2 33 131 9.0E-07
sp|Q42540|UBC7_ARATH Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=1 SV=1 23 130 2.0E-06
sp|Q4WLA7|UBC2_ASPFU Ubiquitin-conjugating enzyme E2 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ubc2 PE=3 SV=1 41 86 2.0E-06
sp|P52493|UBC2_NEUCR Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mus-8 PE=3 SV=4 1 86 2.0E-06
sp|Q96UP5|UBC2_EMENI Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=uvsJ PE=3 SV=1 41 86 2.0E-06
sp|Q32LD2|UBE2T_BOVIN Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=2 38 124 4.0E-06
sp|P52490|UBC13_YEAST Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBC13 PE=1 SV=1 1 124 4.0E-06
sp|Q9C9Y7|UBC12_ARATH Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1 9 124 4.0E-06
sp|Q3ZCF7|UB2D3_BOVIN Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1 38 124 4.0E-06
sp|P62254|UB2G1_MOUSE Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=1 SV=3 23 124 5.0E-06
sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1 9 124 5.0E-06
sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1 38 124 5.0E-06
sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1 38 124 5.0E-06
sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1 SV=1 38 124 5.0E-06
sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1 38 124 5.0E-06
sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1 38 124 5.0E-06
sp|P62253|UB2G1_HUMAN Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3 23 124 5.0E-06
sp|P62255|UB2G1_RAT Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3 23 124 5.0E-06
sp|Q4R5Y8|UB2G1_MACFA Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1 9 124 5.0E-06
sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1 9 124 6.0E-06
sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=1 SV=1 9 124 6.0E-06
sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1 9 124 6.0E-06
sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1 9 124 6.0E-06
sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1 9 124 6.0E-06
sp|P56616|UBE2C_XENLA Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1 10 126 6.0E-06
sp|Q9SLE4|UBC29_ARATH Ubiquitin-conjugating enzyme E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1 9 124 6.0E-06
sp|P25868|UBC7_WHEAT Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1 34 130 8.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3621
MATVPRNFRLLEELEKGEKGLGAEACSYGLEDPEDLLMSNWNGTILGPPNSVHENRIYSVKMHCGDQYPDQPPTI
QFVSQVNLPCVNPRNGVVDPKQLPCLTQWKRENTMETVLIELRRYMAAPANRKLAQPPEGSTYAP*
Coding >Ophun1|3621
ATGGCCACGGTCCCACGCAACTTTCGCCTGCTGGAGGAGCTCGAAAAGGGCGAAAAGGGCCTGGGCGCCGAGGCC
TGTAGCTACGGCCTTGAGGACCCGGAGGATCTGCTGATGAGCAACTGGAACGGGACCATCCTTGGGCCCCCGAAC
TCGGTCCACGAGAACCGCATCTACAGCGTCAAGATGCACTGCGGAGACCAATACCCCGACCAGCCTCCAACCATC
CAGTTCGTCAGCCAAGTCAACCTCCCCTGCGTCAACCCGCGCAACGGCGTCGTCGACCCCAAGCAACTGCCCTGC
CTCACCCAGTGGAAGCGCGAAAACACCATGGAGACGGTCCTCATCGAGCTGCGGAGGTACATGGCCGCTCCCGCC
AACAGGAAGCTGGCCCAGCCCCCCGAGGGATCGACCTATGCCCCGTGA
Transcript >Ophun1|3621
ATGGCCACGGTCCCACGCAACTTTCGCCTGCTGGAGGAGCTCGAAAAGGGCGAAAAGGGCCTGGGCGCCGAGGCC
TGTAGCTACGGCCTTGAGGACCCGGAGGATCTGCTGATGAGCAACTGGAACGGGACCATCCTTGGGCCCCCGAAC
TCGGTCCACGAGAACCGCATCTACAGCGTCAAGATGCACTGCGGAGACCAATACCCCGACCAGCCTCCAACCATC
CAGTTCGTCAGCCAAGTCAACCTCCCCTGCGTCAACCCGCGCAACGGCGTCGTCGACCCCAAGCAACTGCCCTGC
CTCACCCAGTGGAAGCGCGAAAACACCATGGAGACGGTCCTCATCGAGCTGCGGAGGTACATGGCCGCTCCCGCC
AACAGGAAGCTGGCCCAGCCCCCCGAGGGATCGACCTATGCCCCGTGA
Gene >Ophun1|3621
ATGGCCACGGTCCCACGCAACTTTCGCCTGCTGGAGGAGCTCGAAAAGGGCGAAAAGGGCCTGGGCGCCGAGGCC
TGTAGCTACGGCCTTGAGGACCCGGAGGATCTGCTGATGAGCAACTGGAACGGGACCATCCTTGGGCCCCCGAAC
GTAAGCATCTGTCTGCATTCTCCCTGTCTCTTCATCATCAGCATGTTTGTCCATCTCTTGTGCAGCTCTAACTAC
TTCTCTTGTCCGGTATCTTTCCCCCTTCTGCCCAGACAAATCAGCTAAGACGTCGCAGTCGGTCCACGAGAACCG
CATCTACAGCGTCAAGATGCACTGCGGAGACCAATACCCCGACCAGCCTCCAACCATCCAGTTCGTCAGCCAAGT
CAACCTCCCCTGCGTCAACCCGCGCAACGGCGTCGTCGACCCCAAGCAACTGCCCTGCCTCACCCAGTGGAAGCG
CGAAAACACCATGGAGACGGTCCTCATCGAGCTGCGGAGGTACATGGCCGCTCCCGCCAACAGGAAGCTGGCCCA
GCCCCCCGAGGGATCGACCTATGCCCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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