Protein ID | Ophun1|3610 |
Gene name | |
Location | Contig_321:897..2356 |
Strand | - |
Gene length (bp) | 1459 |
Transcript length (bp) | 1401 |
Coding sequence length (bp) | 1401 |
Protein length (aa) | 467 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08618 | Opi1 | Transcription factor Opi1 | 7.6E-29 | 229 | 384 |
PF08618 | Opi1 | Transcription factor Opi1 | 1.4E-07 | 400 | 439 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q01306|CCG8_NEUCR | Clock-controlled protein 8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ccg-8 PE=2 SV=3 | 50 | 437 | 5.0E-65 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003714 | transcription corepressor activity | Yes |
GO:0140110 | transcription regulator activity | No |
GO:0003712 | transcription coregulator activity | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 65 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|3610 MTISGPRDLDPKRHEPVNMTDSWNSSLAYRPPLTTVKGTPSVDAEIDRQLSLDDPDVRLAAEALGDLRADFVSTT PEASPTPDQSSQQPPRQEPLLSLLTTSHPLVASTIGGASSAYGGAKNLSPRFKSGAEYVEGYLTPIANTVNSVGR VTGVEGGVRWFLGGSRRHDHPLDPELGGYSHKRRKVGEGDVDADLPGAPLTLWSADPLRFDHRSPRRLSSTSTID TLPAYDELRSPAYTETTGSQSTASRTSPWQSRLMLSTSGLSVAMSAESLRSLKYCLRLLRWTNDHMGRVIGTLKA TIEEYEKTRSSPAAPDATTTANPEPEPESSRVELVNRINTLKSDILKTLQNTIETVSKYAGGALPENARVLVRRH LMSLPQRFRLATMTTDGGSSKDGESAISEGAQKVLVLAKEGLDMVTQVSGVVDGTIMSAEEWCERMDRKRQSPRD EEEAGGAEASGDVKMA* |
Coding | >Ophun1|3610 ATGACCATCTCTGGTCCCCGAGACCTCGACCCGAAGCGTCATGAGCCCGTAAACATGACCGACTCGTGGAACAGC TCGCTGGCTTATCGCCCTCCGCTGACGACGGTCAAGGGCACGCCGTCCGTCGATGCCGAAATCGATCGTCAACTC TCCCTTGACGACCCCGACGTACGCCTGGCTGCCGAGGCCCTGGGAGACTTGAGGGCGGACTTTGTCTCGACTACG CCAGAAGCGAGCCCCACGCCCGACCAGAGCTCACAGCAGCCACCGCGGCAAGAGCCTCTTCTGTCCCTTCTCACC ACGTCACACCCTCTCGTCGCGAGCACCATCGGAGGCGCCAGCTCTGCCTACGGGGGCGCTAAAAACCTGTCTCCG CGCTTCAAGTCGGGCGCCGAGTATGTCGAGGGCTATCTCACTCCCATTGCCAATACGGTAAACTCGGTCGGCCGT GTCACCGGCGTCGAGGGTGGCGTCCGCTGGTTCCTCGGCGGTAGTCGCCGTCACGACCATCCCTTGGACCCGGAA TTGGGCGGCTACTCTCACAAGCGACGCAAGGTGGGCGAGGGCGACGTTGATGCCGATCTGCCAGGCGCTCCTTTG ACACTGTGGTCCGCCGACCCTCTCCGCTTCGACCATCGGAGCCCTCGTCGGTTGTCGTCGACGAGCACCATTGAC ACGCTTCCGGCCTACGACGAGTTGCGCTCACCAGCCTACACGGAGACGACGGGCTCTCAGTCAACGGCATCGCGA ACAAGCCCGTGGCAGTCGCGTCTGATGCTCTCGACGTCGGGTCTCAGCGTCGCCATGAGCGCCGAGAGCCTGCGT AGCCTCAAATACTGCCTGCGTCTGCTGCGATGGACCAACGACCACATGGGCCGCGTCATCGGAACGCTCAAGGCC ACCATCGAAGAGTACGAAAAGACTCGCTCGTCTCCGGCTGCCCCCGACGCGACGACGACGGCCAATCCCGAGCCG GAGCCGGAGTCGTCTCGAGTGGAGCTCGTCAACCGCATCAACACGCTCAAGTCGGACATTCTCAAGACGCTTCAG AACACCATCGAGACGGTGTCCAAGTACGCGGGCGGCGCGCTGCCGGAGAATGCGCGCGTTCTCGTTCGCCGGCAC TTGATGAGCCTGCCCCAGCGCTTCCGTCTCGCCACCATGACTACCGACGGCGGCTCAAGCAAGGACGGCGAGTCA GCCATCAGCGAGGGCGCGCAAAAGGTGCTGGTCCTGGCCAAGGAGGGACTCGACATGGTGACGCAGGTCAGTGGT GTCGTCGATGGCACCATTATGAGCGCCGAGGAGTGGTGCGAGCGCATGGACCGCAAGAGACAGTCTCCGAGGGAC GAGGAGGAGGCTGGGGGGGCGGAAGCGAGCGGCGATGTCAAGATGGCCTAG |
Transcript | >Ophun1|3610 ATGACCATCTCTGGTCCCCGAGACCTCGACCCGAAGCGTCATGAGCCCGTAAACATGACCGACTCGTGGAACAGC TCGCTGGCTTATCGCCCTCCGCTGACGACGGTCAAGGGCACGCCGTCCGTCGATGCCGAAATCGATCGTCAACTC TCCCTTGACGACCCCGACGTACGCCTGGCTGCCGAGGCCCTGGGAGACTTGAGGGCGGACTTTGTCTCGACTACG CCAGAAGCGAGCCCCACGCCCGACCAGAGCTCACAGCAGCCACCGCGGCAAGAGCCTCTTCTGTCCCTTCTCACC ACGTCACACCCTCTCGTCGCGAGCACCATCGGAGGCGCCAGCTCTGCCTACGGGGGCGCTAAAAACCTGTCTCCG CGCTTCAAGTCGGGCGCCGAGTATGTCGAGGGCTATCTCACTCCCATTGCCAATACGGTAAACTCGGTCGGCCGT GTCACCGGCGTCGAGGGTGGCGTCCGCTGGTTCCTCGGCGGTAGTCGCCGTCACGACCATCCCTTGGACCCGGAA TTGGGCGGCTACTCTCACAAGCGACGCAAGGTGGGCGAGGGCGACGTTGATGCCGATCTGCCAGGCGCTCCTTTG ACACTGTGGTCCGCCGACCCTCTCCGCTTCGACCATCGGAGCCCTCGTCGGTTGTCGTCGACGAGCACCATTGAC ACGCTTCCGGCCTACGACGAGTTGCGCTCACCAGCCTACACGGAGACGACGGGCTCTCAGTCAACGGCATCGCGA ACAAGCCCGTGGCAGTCGCGTCTGATGCTCTCGACGTCGGGTCTCAGCGTCGCCATGAGCGCCGAGAGCCTGCGT AGCCTCAAATACTGCCTGCGTCTGCTGCGATGGACCAACGACCACATGGGCCGCGTCATCGGAACGCTCAAGGCC ACCATCGAAGAGTACGAAAAGACTCGCTCGTCTCCGGCTGCCCCCGACGCGACGACGACGGCCAATCCCGAGCCG GAGCCGGAGTCGTCTCGAGTGGAGCTCGTCAACCGCATCAACACGCTCAAGTCGGACATTCTCAAGACGCTTCAG AACACCATCGAGACGGTGTCCAAGTACGCGGGCGGCGCGCTGCCGGAGAATGCGCGCGTTCTCGTTCGCCGGCAC TTGATGAGCCTGCCCCAGCGCTTCCGTCTCGCCACCATGACTACCGACGGCGGCTCAAGCAAGGACGGCGAGTCA GCCATCAGCGAGGGCGCGCAAAAGGTGCTGGTCCTGGCCAAGGAGGGACTCGACATGGTGACGCAGGTCAGTGGT GTCGTCGATGGCACCATTATGAGCGCCGAGGAGTGGTGCGAGCGCATGGACCGCAAGAGACAGTCTCCGAGGGAC GAGGAGGAGGCTGGGGGGGCGGAAGCGAGCGGCGATGTCAAGATGGCCTAG |
Gene | >Ophun1|3610 ATGACCATCTCTGGTCCCCGAGACCTCGACCCGAAGCGTCATGAGCCCGTAAACATGACCGACTCGTGGAACAGC TCGCTGGCTTATCGCCCTCCGCTGACGACGGTCAAGGGCACGCCGTCCGTCGATGCCGAAATCGATCGTCAACTC TCCCTTGACGACCCCGACGTACGCCTGGCTGCCGAGGCCCTGGGAGACTTGAGGGCGGGTCCGTCTCGCCCTTTC TCTTCTTGTCTGTATCTGTCACTGATGGGCTTCACCTTCAGACTTTGTCTCGACTACGCCAGAAGCGAGCCCCAC GCCCGACCAGAGCTCACAGCAGCCACCGCGGCAAGAGCCTCTTCTGTCCCTTCTCACCACGTCACACCCTCTCGT CGCGAGCACCATCGGAGGCGCCAGCTCTGCCTACGGGGGCGCTAAAAACCTGTCTCCGCGCTTCAAGTCGGGCGC CGAGTATGTCGAGGGCTATCTCACTCCCATTGCCAATACGGTAAACTCGGTCGGCCGTGTCACCGGCGTCGAGGG TGGCGTCCGCTGGTTCCTCGGCGGTAGTCGCCGTCACGACCATCCCTTGGACCCGGAATTGGGCGGCTACTCTCA CAAGCGACGCAAGGTGGGCGAGGGCGACGTTGATGCCGATCTGCCAGGCGCTCCTTTGACACTGTGGTCCGCCGA CCCTCTCCGCTTCGACCATCGGAGCCCTCGTCGGTTGTCGTCGACGAGCACCATTGACACGCTTCCGGCCTACGA CGAGTTGCGCTCACCAGCCTACACGGAGACGACGGGCTCTCAGTCAACGGCATCGCGAACAAGCCCGTGGCAGTC GCGTCTGATGCTCTCGACGTCGGGTCTCAGCGTCGCCATGAGCGCCGAGAGCCTGCGTAGCCTCAAATACTGCCT GCGTCTGCTGCGATGGACCAACGACCACATGGGCCGCGTCATCGGAACGCTCAAGGCCACCATCGAAGAGTACGA AAAGACTCGCTCGTCTCCGGCTGCCCCCGACGCGACGACGACGGCCAATCCCGAGCCGGAGCCGGAGTCGTCTCG AGTGGAGCTCGTCAACCGCATCAACACGCTCAAGTCGGACATTCTCAAGACGCTTCAGAACACCATCGAGACGGT GTCCAAGTACGCGGGCGGCGCGCTGCCGGAGAATGCGCGCGTTCTCGTTCGCCGGCACTTGATGAGCCTGCCCCA GCGCTTCCGTCTCGCCACCATGACTACCGACGGCGGCTCAAGCAAGGACGGCGAGTCAGCCATCAGCGAGGGCGC GCAAAAGGTGCTGGTCCTGGCCAAGGAGGGACTCGACATGGTGACGCAGGTCAGTGGTGTCGTCGATGGCACCAT TATGAGCGCCGAGGAGTGGTGCGAGCGCATGGACCGCAAGAGACAGTCTCCGAGGGACGAGGAGGAGGCTGGGGG GGCGGAAGCGAGCGGCGATGTCAAGATGGCCTAG |