Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3553
Gene name
LocationContig_317:3387..5035
Strand+
Gene length (bp)1648
Transcript length (bp)1335
Coding sequence length (bp)1335
Protein length (aa) 445

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00002 7tm_2 7 transmembrane receptor (Secretin family) 9.0E-07 24 196

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q54U75|CRLA_DICDI Cyclic AMP receptor-like protein A OS=Dictyostelium discoideum GN=crlA PE=2 SV=1 16 193 1.0E-07

GO

GO Term Description Terminal node
GO:0007186 G protein-coupled receptor signaling pathway Yes
GO:0016021 integral component of membrane Yes
GO:0004930 G protein-coupled receptor activity Yes
GO:0050789 regulation of biological process No
GO:0004888 transmembrane signaling receptor activity No
GO:0065007 biological regulation No
GO:0007165 signal transduction No
GO:0031224 intrinsic component of membrane No
GO:0003674 molecular_function No
GO:0038023 signaling receptor activity No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No
GO:0050794 regulation of cellular process No
GO:0008150 biological_process No
GO:0060089 molecular transducer activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 59 81 22
3 105 124 19
4 131 153 22
5 180 202 22
6 318 340 22
7 350 372 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3553
MAFLPPSRSTTAAERLTPRQVDVLVALERAGGSVSLVALVFIFIAYALFRPVRNVQNTFIVFASVSNVGASVASI
IALDGIKAGTQTPLCQTQSFLFEMFMQSDPWWSLAMSVNVFLVFYYRTSPDSFRRWWWIYCLICYGGPFIIALTL
LLIKSQERGPVYGQATIWCWVDSKWDSIRIFTYYMLIWICIIGSFVCYSLVGYHVFRSRNRLRSFPASKNREAGQ
YERTMQQHEASGGTRTTEVQVVHTSASVRGNTTLVEPKQVHVSSQVFSTATSAAPRHSSFMSPLGEGVKMGKRFA
SKFVVDDPIKRAYLRTSLLFALSVLVTWIPSSLNRIHGWLVGASPFEFHVATAAVLPLQGVWNCFIFFVTSWKVV
KQCLRRLPSESSRSARGESVGTVDRNVGRCHRDDLRSETDFDDAESGNMGSDVELRHVSDHGGKEMSSV*
Coding >Ophun1|3553
ATGGCCTTCCTCCCGCCCTCGAGATCCACGACGGCGGCCGAACGCCTGACACCGAGACAAGTTGACGTGCTGGTT
GCTCTCGAGCGCGCCGGCGGTTCCGTCAGTCTCGTCGCTCTCGTCTTCATCTTCATCGCCTACGCGCTCTTCCGG
CCGGTTCGCAACGTCCAGAACACCTTTATCGTCTTCGCCAGCGTGTCCAATGTCGGGGCTAGTGTTGCGAGCATC
ATTGCGCTGGATGGTATCAAGGCTGGGACGCAGACGCCGCTGTGTCAGACGCAGAGCTTTCTCTTTGAGATGTTC
ATGCAATCCGACCCCTGGTGGTCCCTCGCCATGTCCGTCAACGTCTTTCTCGTCTTCTACTACCGCACCTCTCCC
GACTCGTTCCGAAGATGGTGGTGGATCTACTGCCTCATCTGCTATGGTGGCCCCTTCATCATCGCCCTGACACTC
CTCCTCATCAAGAGCCAGGAGCGAGGGCCCGTCTACGGTCAAGCCACGATTTGGTGCTGGGTCGACTCCAAGTGG
GACAGCATCCGCATCTTTACCTACTACATGCTCATCTGGATATGCATCATCGGCTCCTTTGTCTGCTATAGTCTG
GTCGGATACCACGTCTTCCGATCCCGGAACCGGCTCCGCAGCTTCCCGGCCTCCAAGAACCGAGAGGCAGGCCAA
TATGAGAGAACGATGCAGCAACACGAAGCCAGTGGCGGCACGAGAACTACAGAGGTTCAGGTCGTCCACACATCA
GCCTCAGTCAGGGGCAACACTACGCTCGTCGAGCCCAAGCAAGTCCACGTCAGCTCCCAGGTCTTCTCTACAGCG
ACGTCAGCAGCGCCTCGTCACAGCAGCTTCATGTCTCCCCTGGGCGAGGGCGTCAAGATGGGCAAGCGGTTCGCG
TCCAAGTTCGTCGTCGACGATCCCATCAAGCGAGCCTACCTACGGACGAGCCTCCTCTTTGCTCTCAGCGTTCTC
GTTACTTGGATCCCGAGTAGCCTGAACCGGATCCACGGCTGGCTGGTAGGAGCTTCGCCCTTTGAGTTCCACGTC
GCCACAGCGGCTGTGCTGCCTCTTCAGGGGGTCTGGAACTGCTTCATCTTCTTCGTCACGAGCTGGAAGGTCGTC
AAGCAATGTCTCCGTCGTCTACCGTCTGAATCGTCCCGTTCAGCCAGGGGCGAATCCGTGGGCACCGTCGATCGG
AACGTCGGCCGCTGTCATCGGGACGATCTACGGTCCGAGACGGATTTCGACGACGCCGAGTCGGGGAATATGGGG
AGCGATGTCGAGCTCAGGCACGTGTCTGACCACGGGGGCAAAGAGATGTCTAGTGTATGA
Transcript >Ophun1|3553
ATGGCCTTCCTCCCGCCCTCGAGATCCACGACGGCGGCCGAACGCCTGACACCGAGACAAGTTGACGTGCTGGTT
GCTCTCGAGCGCGCCGGCGGTTCCGTCAGTCTCGTCGCTCTCGTCTTCATCTTCATCGCCTACGCGCTCTTCCGG
CCGGTTCGCAACGTCCAGAACACCTTTATCGTCTTCGCCAGCGTGTCCAATGTCGGGGCTAGTGTTGCGAGCATC
ATTGCGCTGGATGGTATCAAGGCTGGGACGCAGACGCCGCTGTGTCAGACGCAGAGCTTTCTCTTTGAGATGTTC
ATGCAATCCGACCCCTGGTGGTCCCTCGCCATGTCCGTCAACGTCTTTCTCGTCTTCTACTACCGCACCTCTCCC
GACTCGTTCCGAAGATGGTGGTGGATCTACTGCCTCATCTGCTATGGTGGCCCCTTCATCATCGCCCTGACACTC
CTCCTCATCAAGAGCCAGGAGCGAGGGCCCGTCTACGGTCAAGCCACGATTTGGTGCTGGGTCGACTCCAAGTGG
GACAGCATCCGCATCTTTACCTACTACATGCTCATCTGGATATGCATCATCGGCTCCTTTGTCTGCTATAGTCTG
GTCGGATACCACGTCTTCCGATCCCGGAACCGGCTCCGCAGCTTCCCGGCCTCCAAGAACCGAGAGGCAGGCCAA
TATGAGAGAACGATGCAGCAACACGAAGCCAGTGGCGGCACGAGAACTACAGAGGTTCAGGTCGTCCACACATCA
GCCTCAGTCAGGGGCAACACTACGCTCGTCGAGCCCAAGCAAGTCCACGTCAGCTCCCAGGTCTTCTCTACAGCG
ACGTCAGCAGCGCCTCGTCACAGCAGCTTCATGTCTCCCCTGGGCGAGGGCGTCAAGATGGGCAAGCGGTTCGCG
TCCAAGTTCGTCGTCGACGATCCCATCAAGCGAGCCTACCTACGGACGAGCCTCCTCTTTGCTCTCAGCGTTCTC
GTTACTTGGATCCCGAGTAGCCTGAACCGGATCCACGGCTGGCTGGTAGGAGCTTCGCCCTTTGAGTTCCACGTC
GCCACAGCGGCTGTGCTGCCTCTTCAGGGGGTCTGGAACTGCTTCATCTTCTTCGTCACGAGCTGGAAGGTCGTC
AAGCAATGTCTCCGTCGTCTACCGTCTGAATCGTCCCGTTCAGCCAGGGGCGAATCCGTGGGCACCGTCGATCGG
AACGTCGGCCGCTGTCATCGGGACGATCTACGGTCCGAGACGGATTTCGACGACGCCGAGTCGGGGAATATGGGG
AGCGATGTCGAGCTCAGGCACGTGTCTGACCACGGGGGCAAAGAGATGTCTAGTGTATGA
Gene >Ophun1|3553
ATGGCCTTCCTCCCGCCCTCGAGATCCACGACGGCGGCCGAACGCCTGACACCGAGACAAGTTGACGTGCTGGTT
GCTCTCGAGCGCGCCGGCGGTTCCGTCAGTCTCGTCGCTCTCGTCTTCATCTTCATCGCCTACGCGCTCTTCCGG
CCGGTTCGCAACGTCCAGAACACCTTTATCGTCTTCGCCAGCGTGTCCAATGTCGGGGCTAGTGTTGCGAGCATC
ATTGCGCTGGATGGTATCAAGGCTGGGACGCAGACGCCGCTGTGTCAGACGCAGAGCTTTCTCTTTGAGATGTTG
GTGCCCTTTCTTGATCTCGCTCGTTCATCTTCTCTTTCCTCCTCTTGTCTCTCGTCTATAATGTGCCGTCAGGGG
CTCTAAACCACCATGATACTCGCTTCCACAAGCTGACTCTTCCAGGTTCATGCAATCCGACCCCTGGTGGTCCCT
CGCCATGTCCGTCAACGTCTTTCTCGTCTTCTACTACCGCACCTCTCCCGACTCGTTCCGAAGATGGTGGTGGAT
CTACTGCCTCATCTGCTATGGTGGCCCCTTCATCATCGCCCTGACACTCCTCCTCATCAAGAGCCAGGAGCGAGG
GCCCGTCTACGGTCAAGCCACGGTATGCTTCCGACAGCGTCATGACACCATCTCAGCTAACAAGAGGCAGATTTG
GTGCTGGGTCGACTCCAAGTGGGACAGCATCCGCATCTTTACCTACTACATGCTCATCTGGATATGCATCATCGG
CTCCTTTGTCTGCTATAGTCTGGTCGGATACCACGTCTTCCGATCCCGGAACCGGCTCCGCAGCTTCCCGGCCTC
CAAGAACCGAGAGGCAGGCCAATATGAGAGAGTATGTAGAACTGCCTTCTTGAGAGACAGATATCTGTCGAACCG
GCAAGCTGATCATGTTTAACTGATATACACACAGACGATGCAGCAACACGAAGCCAGTGGCGGCACGAGAACTAC
AGAGGTTCAGGTCGTCCACACATCAGCCTCAGTCAGGGGCAACACTACGCTCGTCGAGCCCAAGCAAGTCCACGT
CAGCTGTACAAGACAGGCTTCATCCTTCGACAACGTCCCAACATCCCCCAGAAAACGGCCCGTAGCAGCCCAGGT
CTTCTCTACAGCGACGTCAGCAGCGCCTCGTCACAGCAGCTTCATGTCTCCCCTGGGCGAGGGCGTCAAGATGGG
CAAGCGGTTCGCGTCCAAGTTCGTCGTCGACGATCCCATCAAGCGAGCCTACCTACGGACGAGCCTCCTCTTTGC
TCTCAGCGTTCTCGTTACTTGGATCCCGAGTAGCCTGAACCGGATCCACGGCTGGCTGGTAGGAGCTTCGCCCTT
TGAGTTCCACGTCGCCACAGCGGCTGTGCTGCCTCTTCAGGGGGTCTGGAACTGCTTCATCTTCTTCGTCACGAG
CTGGAAGGTCGTCAAGCAATGTCTCCGTCGTCTACCGTCTGAATCGTCCCGTTCAGCCAGGGGCGAATCCGTGGG
CACCGTCGATCGGAACGTCGGCCGCTGTCATCGGGACGATCTACGGTCCGAGACGGATTTCGACGACGCCGAGTC
GGGGAATATGGGGAGCGATGTCGAGCTCAGGCACGTGTCTGACCACGGGGGCAAAGAGATGTCTAGTGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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