Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3550
Gene name
LocationContig_316:18987..19779
Strand-
Gene length (bp)792
Transcript length (bp)729
Coding sequence length (bp)729
Protein length (aa) 243

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 142 164 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3550
MAQVPITTIPPFADTAKLPDCAKACGPLYDANGACVPPAAPQADPAAYTACFCNHAKVAPFSKGTAGVCDAACTA
NQAGLQSIAGWFQSICKSPSQPPPPNNNNGNNGNIRQNNNGAGESSPVSPVVPANNGGGDWLSHHWQWVIMLVVL
VVGIAGIWIGACVWRRRYLRNKDQLLLSQKHQPESAVSAQAATTSTPSWGPVIPPSESHAPMTFLADSERSFTAE
KAASPKDKLKWTVTERT*
Coding >Ophun1|3550
ATGGCCCAAGTCCCCATCACCACCATCCCCCCCTTCGCCGACACGGCCAAACTCCCCGACTGCGCCAAAGCCTGC
GGTCCTCTCTACGACGCAAACGGCGCCTGCGTCCCTCCCGCCGCCCCTCAGGCCGACCCTGCCGCCTACACGGCC
TGCTTCTGCAACCATGCCAAGGTAGCTCCCTTCTCAAAGGGCACCGCCGGAGTCTGCGACGCCGCCTGCACCGCC
AATCAAGCTGGCCTTCAGTCCATCGCCGGCTGGTTCCAGTCCATCTGCAAGTCTCCCTCTCAACCGCCTCCCCCG
AACAACAACAACGGCAACAACGGCAACATCCGCCAAAACAACAACGGCGCCGGCGAATCCTCCCCCGTCTCCCCC
GTCGTCCCCGCCAACAACGGAGGCGGAGACTGGCTCTCCCACCACTGGCAATGGGTCATCATGCTCGTCGTCCTC
GTCGTCGGCATCGCCGGCATCTGGATAGGAGCTTGTGTCTGGCGACGCCGCTACCTCCGAAACAAGGACCAGCTC
CTCCTCAGCCAGAAGCACCAGCCCGAATCTGCCGTCTCCGCCCAAGCTGCCACCACCAGCACCCCTTCCTGGGGC
CCCGTCATACCCCCCTCCGAATCCCACGCGCCCATGACCTTTTTGGCCGACTCGGAGCGCTCCTTTACCGCCGAA
AAGGCCGCCAGTCCCAAGGACAAGCTCAAGTGGACCGTCACCGAGCGTACCTAA
Transcript >Ophun1|3550
ATGGCCCAAGTCCCCATCACCACCATCCCCCCCTTCGCCGACACGGCCAAACTCCCCGACTGCGCCAAAGCCTGC
GGTCCTCTCTACGACGCAAACGGCGCCTGCGTCCCTCCCGCCGCCCCTCAGGCCGACCCTGCCGCCTACACGGCC
TGCTTCTGCAACCATGCCAAGGTAGCTCCCTTCTCAAAGGGCACCGCCGGAGTCTGCGACGCCGCCTGCACCGCC
AATCAAGCTGGCCTTCAGTCCATCGCCGGCTGGTTCCAGTCCATCTGCAAGTCTCCCTCTCAACCGCCTCCCCCG
AACAACAACAACGGCAACAACGGCAACATCCGCCAAAACAACAACGGCGCCGGCGAATCCTCCCCCGTCTCCCCC
GTCGTCCCCGCCAACAACGGAGGCGGAGACTGGCTCTCCCACCACTGGCAATGGGTCATCATGCTCGTCGTCCTC
GTCGTCGGCATCGCCGGCATCTGGATAGGAGCTTGTGTCTGGCGACGCCGCTACCTCCGAAACAAGGACCAGCTC
CTCCTCAGCCAGAAGCACCAGCCCGAATCTGCCGTCTCCGCCCAAGCTGCCACCACCAGCACCCCTTCCTGGGGC
CCCGTCATACCCCCCTCCGAATCCCACGCGCCCATGACCTTTTTGGCCGACTCGGAGCGCTCCTTTACCGCCGAA
AAGGCCGCCAGTCCCAAGGACAAGCTCAAGTGGACCGTCACCGAGCGTACCTAA
Gene >Ophun1|3550
ATGGGTAAGCAATAACTCACAATCCCCCCTCAACCGACAACCTCGTTGACATCGACACCTTTCCCAGCCCAAGTC
CCCATCACCACCATCCCCCCCTTCGCCGACACGGCCAAACTCCCCGACTGCGCCAAAGCCTGCGGTCCTCTCTAC
GACGCAAACGGCGCCTGCGTCCCTCCCGCCGCCCCTCAGGCCGACCCTGCCGCCTACACGGCCTGCTTCTGCAAC
CATGCCAAGGTAGCTCCCTTCTCAAAGGGCACCGCCGGAGTCTGCGACGCCGCCTGCACCGCCAATCAAGCTGGC
CTTCAGTCCATCGCCGGCTGGTTCCAGTCCATCTGCAAGTCTCCCTCTCAACCGCCTCCCCCGAACAACAACAAC
GGCAACAACGGCAACATCCGCCAAAACAACAACGGCGCCGGCGAATCCTCCCCCGTCTCCCCCGTCGTCCCCGCC
AACAACGGAGGCGGAGACTGGCTCTCCCACCACTGGCAATGGGTCATCATGCTCGTCGTCCTCGTCGTCGGCATC
GCCGGCATCTGGATAGGAGCTTGTGTCTGGCGACGCCGCTACCTCCGAAACAAGGACCAGCTCCTCCTCAGCCAG
AAGCACCAGCCCGAATCTGCCGTCTCCGCCCAAGCTGCCACCACCAGCACCCCTTCCTGGGGCCCCGTCATACCC
CCCTCCGAATCCCACGCGCCCATGACCTTTTTGGCCGACTCGGAGCGCTCCTTTACCGCCGAAAAGGCCGCCAGT
CCCAAGGACAAGCTCAAGTGGACCGTCACCGAGCGTACCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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