Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3545
Gene name
LocationContig_316:7261..8221
Strand+
Gene length (bp)960
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13772 AIG2_2 AIG2-like family 4.7E-08 127 221

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 238 260 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3545
MSSTTQLICPTTAPAALDDRLGPLPAPSLPRTSWKRLSQASNPDPNSGGPTTVLYLAYGSNMAAATFLGMRGIKP
ISQVNVSVPSLRLTFGLRGVPYWEPCFANVGFRDASEKTAPDDWDGRWDGRLMGVVYEVTPSDFGVIMRTEGAGS
SYKDITVPCIPIKSGPEQHDRQPFVARTLYAPQDWTDEPRHDGAQPSLRYLNLLRDGAREHGLPESYQRYLGSLE
PYTITHWRQRVGRFLLLLLWSPMLLVLIKVMGLMADETGRVPAGMATAMSTWFNLMWRSYEIVFKPVFGDGERSE
AEDDGRELESYKLPSSQLV*
Coding >Ophun1|3545
ATGTCTTCTACAACTCAGCTAATCTGCCCGACTACGGCGCCGGCCGCCCTCGACGACCGCCTTGGACCGCTGCCA
GCGCCTTCGCTTCCTCGCACGTCGTGGAAACGCCTCTCGCAGGCGTCTAACCCGGATCCCAATTCGGGCGGCCCG
ACGACGGTGCTCTACCTCGCATACGGATCCAACATGGCGGCTGCGACCTTTCTGGGGATGCGAGGCATCAAGCCC
ATCTCCCAAGTCAACGTCTCGGTCCCGAGCCTTCGCCTCACGTTTGGCCTGCGCGGCGTGCCTTACTGGGAGCCC
TGCTTCGCCAACGTCGGCTTCAGAGACGCGTCGGAAAAGACAGCCCCCGACGACTGGGACGGCCGATGGGACGGT
CGCTTGATGGGCGTCGTGTACGAAGTGACGCCCAGCGACTTCGGCGTCATCATGCGCACCGAGGGCGCAGGCTCC
AGCTACAAGGACATCACGGTTCCGTGTATTCCCATCAAAAGCGGGCCAGAGCAGCATGACAGGCAGCCTTTTGTG
GCGAGGACCCTGTATGCTCCGCAGGACTGGACAGACGAGCCGAGGCACGATGGCGCTCAGCCCAGCCTGCGATAC
CTCAATCTCCTACGCGACGGCGCGCGCGAGCACGGGCTGCCGGAGAGCTATCAGAGATATCTCGGGTCGTTGGAG
CCCTACACCATCACGCACTGGCGACAACGGGTGGGACGCTTCTTGCTGCTTCTCTTGTGGTCGCCCATGCTGCTT
GTCTTGATCAAGGTCATGGGCTTGATGGCGGACGAGACCGGCAGGGTGCCGGCGGGAATGGCAACGGCCATGAGC
ACGTGGTTCAATCTCATGTGGAGGAGCTACGAAATCGTCTTCAAGCCTGTGTTTGGCGATGGCGAGAGGTCGGAA
GCCGAGGACGACGGACGTGAGCTGGAGTCGTACAAGTTACCGAGCAGCCAGTTGGTCTGA
Transcript >Ophun1|3545
ATGTCTTCTACAACTCAGCTAATCTGCCCGACTACGGCGCCGGCCGCCCTCGACGACCGCCTTGGACCGCTGCCA
GCGCCTTCGCTTCCTCGCACGTCGTGGAAACGCCTCTCGCAGGCGTCTAACCCGGATCCCAATTCGGGCGGCCCG
ACGACGGTGCTCTACCTCGCATACGGATCCAACATGGCGGCTGCGACCTTTCTGGGGATGCGAGGCATCAAGCCC
ATCTCCCAAGTCAACGTCTCGGTCCCGAGCCTTCGCCTCACGTTTGGCCTGCGCGGCGTGCCTTACTGGGAGCCC
TGCTTCGCCAACGTCGGCTTCAGAGACGCGTCGGAAAAGACAGCCCCCGACGACTGGGACGGCCGATGGGACGGT
CGCTTGATGGGCGTCGTGTACGAAGTGACGCCCAGCGACTTCGGCGTCATCATGCGCACCGAGGGCGCAGGCTCC
AGCTACAAGGACATCACGGTTCCGTGTATTCCCATCAAAAGCGGGCCAGAGCAGCATGACAGGCAGCCTTTTGTG
GCGAGGACCCTGTATGCTCCGCAGGACTGGACAGACGAGCCGAGGCACGATGGCGCTCAGCCCAGCCTGCGATAC
CTCAATCTCCTACGCGACGGCGCGCGCGAGCACGGGCTGCCGGAGAGCTATCAGAGATATCTCGGGTCGTTGGAG
CCCTACACCATCACGCACTGGCGACAACGGGTGGGACGCTTCTTGCTGCTTCTCTTGTGGTCGCCCATGCTGCTT
GTCTTGATCAAGGTCATGGGCTTGATGGCGGACGAGACCGGCAGGGTGCCGGCGGGAATGGCAACGGCCATGAGC
ACGTGGTTCAATCTCATGTGGAGGAGCTACGAAATCGTCTTCAAGCCTGTGTTTGGCGATGGCGAGAGGTCGGAA
GCCGAGGACGACGGACGTGAGCTGGAGTCGTACAAGTTACCGAGCAGCCAGTTGGTCTGA
Gene >Ophun1|3545
ATGTCTTCTACAACTCAGCTAATCTGCCCGACTACGGCGCCGGCCGCCCTCGACGACCGCCTTGGACCGCTGCCA
GCGCCTTCGCTTCCTCGCACGTCGTGGAAACGCCTCTCGCAGGCGTCTAACCCGGATCCCAATTCGGGCGGCCCG
ACGACGGTGCTCTACCTCGCATACGGATCCAACATGGCGGCTGCGACCTTTCTGGGGATGCGAGGCATCAAGCCC
ATCTCCCAAGTCAACGTCTCGGTCCCGAGCCTTCGCCTCACGTTTGGCCTGCGCGGCGTGCCTTACTGGGAGCCC
TGCTTCGCCAACGTCGGCTTCAGAGACGCGTCGGAAAAGACAGCCCCCGACGACTGGGACGGCCGATGGGACGGT
CGCTTGATGGGCGTCGTGTACGAAGTGACGCCCAGCGACTTCGGCGTCATCATGCGCACCGAGGGCGCAGGCTCC
AGCTACAAGGACATCACGGTTCCGTGTATTCCCATCAAAAGCGGGCCAGAGCAGCATGACAGGCAGCCTTTTGTG
GCGAGGACCCTGTATGCTCCGCAGGACTGGACAGACGAGCCGAGGCACGATGGCGCTCAGCCCAGCCTGCGATAC
CTCAATCTCCTACGCGACGGCGCGCGCGAGCACGGGCTGCCGGAGAGCTATCAGAGATATCTCGGGTCGTTGGAG
CCCTACACCATCACGCACTGGCGACAACGGGTGGGACGCTTCTTGCTGCTTCTCTTGTGGTCGCCCATGCTGCTT
GTCTTGATCAAGGTCATGGGCTTGATGGCGGACGAGACCGGCAGGGTGCCGGCGGGAATGGCAACGGCCATGAGC
ACGTGGTTCAATCTCATGTGGAGGAGCTACGAAATCGTCTTCAAGCCTGTGTTTGGCGATGGCGAGAGGTCGGAA
GCCGAGGACGACGGACGTGAGCTGGAGTCGTACAAGTTACCGAGCAGCCAGTTGGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail