Protein ID | Ophun1|3545 |
Gene name | |
Location | Contig_316:7261..8221 |
Strand | + |
Gene length (bp) | 960 |
Transcript length (bp) | 960 |
Coding sequence length (bp) | 960 |
Protein length (aa) | 320 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13772 | AIG2_2 | AIG2-like family | 4.7E-08 | 127 | 221 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 238 | 260 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|3545 MSSTTQLICPTTAPAALDDRLGPLPAPSLPRTSWKRLSQASNPDPNSGGPTTVLYLAYGSNMAAATFLGMRGIKP ISQVNVSVPSLRLTFGLRGVPYWEPCFANVGFRDASEKTAPDDWDGRWDGRLMGVVYEVTPSDFGVIMRTEGAGS SYKDITVPCIPIKSGPEQHDRQPFVARTLYAPQDWTDEPRHDGAQPSLRYLNLLRDGAREHGLPESYQRYLGSLE PYTITHWRQRVGRFLLLLLWSPMLLVLIKVMGLMADETGRVPAGMATAMSTWFNLMWRSYEIVFKPVFGDGERSE AEDDGRELESYKLPSSQLV* |
Coding | >Ophun1|3545 ATGTCTTCTACAACTCAGCTAATCTGCCCGACTACGGCGCCGGCCGCCCTCGACGACCGCCTTGGACCGCTGCCA GCGCCTTCGCTTCCTCGCACGTCGTGGAAACGCCTCTCGCAGGCGTCTAACCCGGATCCCAATTCGGGCGGCCCG ACGACGGTGCTCTACCTCGCATACGGATCCAACATGGCGGCTGCGACCTTTCTGGGGATGCGAGGCATCAAGCCC ATCTCCCAAGTCAACGTCTCGGTCCCGAGCCTTCGCCTCACGTTTGGCCTGCGCGGCGTGCCTTACTGGGAGCCC TGCTTCGCCAACGTCGGCTTCAGAGACGCGTCGGAAAAGACAGCCCCCGACGACTGGGACGGCCGATGGGACGGT CGCTTGATGGGCGTCGTGTACGAAGTGACGCCCAGCGACTTCGGCGTCATCATGCGCACCGAGGGCGCAGGCTCC AGCTACAAGGACATCACGGTTCCGTGTATTCCCATCAAAAGCGGGCCAGAGCAGCATGACAGGCAGCCTTTTGTG GCGAGGACCCTGTATGCTCCGCAGGACTGGACAGACGAGCCGAGGCACGATGGCGCTCAGCCCAGCCTGCGATAC CTCAATCTCCTACGCGACGGCGCGCGCGAGCACGGGCTGCCGGAGAGCTATCAGAGATATCTCGGGTCGTTGGAG CCCTACACCATCACGCACTGGCGACAACGGGTGGGACGCTTCTTGCTGCTTCTCTTGTGGTCGCCCATGCTGCTT GTCTTGATCAAGGTCATGGGCTTGATGGCGGACGAGACCGGCAGGGTGCCGGCGGGAATGGCAACGGCCATGAGC ACGTGGTTCAATCTCATGTGGAGGAGCTACGAAATCGTCTTCAAGCCTGTGTTTGGCGATGGCGAGAGGTCGGAA GCCGAGGACGACGGACGTGAGCTGGAGTCGTACAAGTTACCGAGCAGCCAGTTGGTCTGA |
Transcript | >Ophun1|3545 ATGTCTTCTACAACTCAGCTAATCTGCCCGACTACGGCGCCGGCCGCCCTCGACGACCGCCTTGGACCGCTGCCA GCGCCTTCGCTTCCTCGCACGTCGTGGAAACGCCTCTCGCAGGCGTCTAACCCGGATCCCAATTCGGGCGGCCCG ACGACGGTGCTCTACCTCGCATACGGATCCAACATGGCGGCTGCGACCTTTCTGGGGATGCGAGGCATCAAGCCC ATCTCCCAAGTCAACGTCTCGGTCCCGAGCCTTCGCCTCACGTTTGGCCTGCGCGGCGTGCCTTACTGGGAGCCC TGCTTCGCCAACGTCGGCTTCAGAGACGCGTCGGAAAAGACAGCCCCCGACGACTGGGACGGCCGATGGGACGGT CGCTTGATGGGCGTCGTGTACGAAGTGACGCCCAGCGACTTCGGCGTCATCATGCGCACCGAGGGCGCAGGCTCC AGCTACAAGGACATCACGGTTCCGTGTATTCCCATCAAAAGCGGGCCAGAGCAGCATGACAGGCAGCCTTTTGTG GCGAGGACCCTGTATGCTCCGCAGGACTGGACAGACGAGCCGAGGCACGATGGCGCTCAGCCCAGCCTGCGATAC CTCAATCTCCTACGCGACGGCGCGCGCGAGCACGGGCTGCCGGAGAGCTATCAGAGATATCTCGGGTCGTTGGAG CCCTACACCATCACGCACTGGCGACAACGGGTGGGACGCTTCTTGCTGCTTCTCTTGTGGTCGCCCATGCTGCTT GTCTTGATCAAGGTCATGGGCTTGATGGCGGACGAGACCGGCAGGGTGCCGGCGGGAATGGCAACGGCCATGAGC ACGTGGTTCAATCTCATGTGGAGGAGCTACGAAATCGTCTTCAAGCCTGTGTTTGGCGATGGCGAGAGGTCGGAA GCCGAGGACGACGGACGTGAGCTGGAGTCGTACAAGTTACCGAGCAGCCAGTTGGTCTGA |
Gene | >Ophun1|3545 ATGTCTTCTACAACTCAGCTAATCTGCCCGACTACGGCGCCGGCCGCCCTCGACGACCGCCTTGGACCGCTGCCA GCGCCTTCGCTTCCTCGCACGTCGTGGAAACGCCTCTCGCAGGCGTCTAACCCGGATCCCAATTCGGGCGGCCCG ACGACGGTGCTCTACCTCGCATACGGATCCAACATGGCGGCTGCGACCTTTCTGGGGATGCGAGGCATCAAGCCC ATCTCCCAAGTCAACGTCTCGGTCCCGAGCCTTCGCCTCACGTTTGGCCTGCGCGGCGTGCCTTACTGGGAGCCC TGCTTCGCCAACGTCGGCTTCAGAGACGCGTCGGAAAAGACAGCCCCCGACGACTGGGACGGCCGATGGGACGGT CGCTTGATGGGCGTCGTGTACGAAGTGACGCCCAGCGACTTCGGCGTCATCATGCGCACCGAGGGCGCAGGCTCC AGCTACAAGGACATCACGGTTCCGTGTATTCCCATCAAAAGCGGGCCAGAGCAGCATGACAGGCAGCCTTTTGTG GCGAGGACCCTGTATGCTCCGCAGGACTGGACAGACGAGCCGAGGCACGATGGCGCTCAGCCCAGCCTGCGATAC CTCAATCTCCTACGCGACGGCGCGCGCGAGCACGGGCTGCCGGAGAGCTATCAGAGATATCTCGGGTCGTTGGAG CCCTACACCATCACGCACTGGCGACAACGGGTGGGACGCTTCTTGCTGCTTCTCTTGTGGTCGCCCATGCTGCTT GTCTTGATCAAGGTCATGGGCTTGATGGCGGACGAGACCGGCAGGGTGCCGGCGGGAATGGCAACGGCCATGAGC ACGTGGTTCAATCTCATGTGGAGGAGCTACGAAATCGTCTTCAAGCCTGTGTTTGGCGATGGCGAGAGGTCGGAA GCCGAGGACGACGGACGTGAGCTGGAGTCGTACAAGTTACCGAGCAGCCAGTTGGTCTGA |