Protein ID | Ophun1|3452 |
Gene name | |
Location | Contig_307:1580..4254 |
Strand | - |
Gene length (bp) | 2674 |
Transcript length (bp) | 1725 |
Coding sequence length (bp) | 1725 |
Protein length (aa) | 575 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07103 | DUF1365 | Protein of unknown function (DUF1365) | 7.9E-56 | 86 | 325 |
PF04828 | GFA | Glutathione-dependent formaldehyde-activating enzyme | 7.6E-24 | 466 | 555 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016846 | carbon-sulfur lyase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0016829 | lyase activity | No |
GO:0003824 | catalytic activity | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 32 | 19 |
2 | 47 | 69 | 22 |
3 | 101 | 123 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 446 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|3452 MDGFSLSKAVNGLLYALLLLLLSYRLFPSGWLDLIFILISYLWLDAYLPSLTNLLQALLPATLILLVNILRPRRT SSTGPTKPRLIPCRTTHARLFPQKHAFAYSYLVVGVPVGFSGSAGGIVSAGLEGTSWLERGWFDVDAGDYLFRGA GGLGLRGKLDDFLRSEHVDPSDYPHAYLLTAARFLGYHFNPVSFWFLYTAEKHLSAMILEVNNTFGERRPYLVFR NEQHDDIKASWPKDFHVSPFNSRHGSYTVTASDPLGPGMDGFRGLDVSIRLRSSKGRAKLVARLFSEGDAIDASL MSARQRFGFLVAWCWVGFVTFPRISLVEEKGVSVRYIPSGVVDGPASYTWTANEVVEHVEVRVLTPVFYSRFVGY VDSLEAVLVEMTVSGTVWIDNPQEYCNAALRLFLSERLLLVDAILLLARAGLAFLTAGVVRGLMPLSGHCLCKAV TYKADVDAPLMTGYDHCDDCQRQTGSTYSLVALVPKAKLTINGPVKKWSGKGSSGKEVHRLFCSECGSPIAHDPD AVPEIIVLKAGTLDKEIREKLKPDTEIWTAGKLPFCQEKLAKAFTHMPQ* |
Coding | >Ophun1|3452 ATGGACGGCTTCTCGCTCAGCAAGGCGGTCAATGGCTTGCTCTACGCTCTTCTCCTCCTCCTACTCTCATACCGG CTGTTTCCCAGCGGCTGGCTGGACCTCATCTTCATCCTGATATCCTACCTCTGGCTCGACGCCTATCTCCCCTCG CTCACCAACCTCCTCCAAGCCCTCCTCCCAGCAACCCTCATCCTCCTCGTCAACATCCTCCGCCCACGACGCACG TCCAGCACCGGCCCGACGAAACCGCGCCTCATCCCCTGCCGCACAACGCACGCCCGCCTCTTCCCGCAGAAGCAC GCCTTTGCATACTCGTATCTCGTCGTCGGGGTGCCGGTTGGCTTCTCGGGTAGCGCTGGGGGTATCGTCTCGGCG GGGCTGGAGGGAACGTCGTGGTTGGAGAGGGGTTGGTTTGATGTCGATGCTGGGGATTATCTGTTTAGAGGCGCC GGTGGGCTTGGTCTGAGGGGGAAGTTGGACGACTTTCTTCGCTCTGAGCATGTTGATCCCAGCGACTATCCGCAC GCATACCTCCTCACAGCCGCCCGCTTCCTAGGCTACCACTTCAACCCAGTCTCCTTCTGGTTCCTCTACACAGCA GAAAAGCACCTCTCGGCCATGATCCTCGAAGTAAACAACACCTTTGGCGAAAGACGACCCTACCTCGTCTTCCGA AACGAGCAGCACGACGACATCAAAGCCTCATGGCCCAAAGACTTTCACGTCTCGCCCTTTAATTCCCGCCATGGA AGCTACACCGTCACCGCAAGCGATCCCCTCGGTCCCGGGATGGATGGCTTCCGCGGGCTGGACGTCTCTATCCGT CTGCGCTCGTCCAAGGGGCGGGCTAAGCTTGTTGCTCGTCTGTTTTCCGAGGGGGATGCCATTGACGCGTCGCTG ATGAGCGCGAGGCAGCGGTTTGGATTCCTCGTTGCTTGGTGTTGGGTGGGGTTCGTGACGTTTCCTCGGATTTCT CTGGTTGAGGAGAAGGGCGTCTCCGTCAGATATATCCCCAGCGGCGTCGTCGATGGACCTGCTTCTTACACGTGG ACGGCAAACGAGGTTGTCGAGCACGTCGAGGTGCGGGTTTTGACGCCCGTCTTTTACTCTCGGTTCGTTGGCTAC GTCGACAGCTTGGAAGCTGTGTTGGTGGAGATGACGGTGAGCGGAACGGTATGGATTGATAACCCGCAAGAATAC TGCAATGCTGCCCTCCGCCTCTTCCTCTCCGAGCGCCTCCTCCTCGTCGACGCGATCCTGCTGCTTGCGCGCGCG GGCCTCGCTTTCCTGACGGCCGGGGTGGTACGAGGGTTGATGCCGCTCTCAGGTCACTGCCTCTGCAAGGCCGTC ACGTACAAGGCCGACGTTGACGCTCCTCTCATGACGGGCTACGACCACTGCGACGACTGCCAGCGTCAAACGGGC TCGACATACTCCCTCGTCGCCCTCGTCCCCAAGGCAAAGCTCACCATCAACGGCCCCGTCAAGAAATGGTCGGGC AAGGGCTCTTCGGGCAAGGAGGTGCATCGTCTTTTCTGCTCCGAGTGCGGGTCGCCCATTGCTCATGATCCGGAT GCCGTGCCGGAAATCATTGTTCTGAAGGCGGGGACGCTGGATAAGGAGATTCGTGAGAAGCTGAAGCCGGATACC GAGATTTGGACGGCGGGCAAGTTGCCGTTTTGTCAGGAGAAGCTGGCCAAGGCTTTTACACATATGCCGCAGTAA |
Transcript | >Ophun1|3452 ATGGACGGCTTCTCGCTCAGCAAGGCGGTCAATGGCTTGCTCTACGCTCTTCTCCTCCTCCTACTCTCATACCGG CTGTTTCCCAGCGGCTGGCTGGACCTCATCTTCATCCTGATATCCTACCTCTGGCTCGACGCCTATCTCCCCTCG CTCACCAACCTCCTCCAAGCCCTCCTCCCAGCAACCCTCATCCTCCTCGTCAACATCCTCCGCCCACGACGCACG TCCAGCACCGGCCCGACGAAACCGCGCCTCATCCCCTGCCGCACAACGCACGCCCGCCTCTTCCCGCAGAAGCAC GCCTTTGCATACTCGTATCTCGTCGTCGGGGTGCCGGTTGGCTTCTCGGGTAGCGCTGGGGGTATCGTCTCGGCG GGGCTGGAGGGAACGTCGTGGTTGGAGAGGGGTTGGTTTGATGTCGATGCTGGGGATTATCTGTTTAGAGGCGCC GGTGGGCTTGGTCTGAGGGGGAAGTTGGACGACTTTCTTCGCTCTGAGCATGTTGATCCCAGCGACTATCCGCAC GCATACCTCCTCACAGCCGCCCGCTTCCTAGGCTACCACTTCAACCCAGTCTCCTTCTGGTTCCTCTACACAGCA GAAAAGCACCTCTCGGCCATGATCCTCGAAGTAAACAACACCTTTGGCGAAAGACGACCCTACCTCGTCTTCCGA AACGAGCAGCACGACGACATCAAAGCCTCATGGCCCAAAGACTTTCACGTCTCGCCCTTTAATTCCCGCCATGGA AGCTACACCGTCACCGCAAGCGATCCCCTCGGTCCCGGGATGGATGGCTTCCGCGGGCTGGACGTCTCTATCCGT CTGCGCTCGTCCAAGGGGCGGGCTAAGCTTGTTGCTCGTCTGTTTTCCGAGGGGGATGCCATTGACGCGTCGCTG ATGAGCGCGAGGCAGCGGTTTGGATTCCTCGTTGCTTGGTGTTGGGTGGGGTTCGTGACGTTTCCTCGGATTTCT CTGGTTGAGGAGAAGGGCGTCTCCGTCAGATATATCCCCAGCGGCGTCGTCGATGGACCTGCTTCTTACACGTGG ACGGCAAACGAGGTTGTCGAGCACGTCGAGGTGCGGGTTTTGACGCCCGTCTTTTACTCTCGGTTCGTTGGCTAC GTCGACAGCTTGGAAGCTGTGTTGGTGGAGATGACGGTGAGCGGAACGGTATGGATTGATAACCCGCAAGAATAC TGCAATGCTGCCCTCCGCCTCTTCCTCTCCGAGCGCCTCCTCCTCGTCGACGCGATCCTGCTGCTTGCGCGCGCG GGCCTCGCTTTCCTGACGGCCGGGGTGGTACGAGGGTTGATGCCGCTCTCAGGTCACTGCCTCTGCAAGGCCGTC ACGTACAAGGCCGACGTTGACGCTCCTCTCATGACGGGCTACGACCACTGCGACGACTGCCAGCGTCAAACGGGC TCGACATACTCCCTCGTCGCCCTCGTCCCCAAGGCAAAGCTCACCATCAACGGCCCCGTCAAGAAATGGTCGGGC AAGGGCTCTTCGGGCAAGGAGGTGCATCGTCTTTTCTGCTCCGAGTGCGGGTCGCCCATTGCTCATGATCCGGAT GCCGTGCCGGAAATCATTGTTCTGAAGGCGGGGACGCTGGATAAGGAGATTCGTGAGAAGCTGAAGCCGGATACC GAGATTTGGACGGCGGGCAAGTTGCCGTTTTGTCAGGAGAAGCTGGCCAAGGCTTTTACACATATGCCGCAGTAA |
Gene | >Ophun1|3452 ATGGACGGCTTCTCGCTCAGCAAGGCGGTCAATGGCTTGCTCTACGCTCTTCTCCTCCTCCTACTCTCATACCGG CTGTTTCCCAGCGGCTGGCTGGACCTCATCTTCATCCTGATATCCTACCTCTGGCTCGACGCCTATCTCCCCTCG CTCACCAACCTCCTCCAAGCCCTCCTCCCAGCAACCCTCATCCTCCTCGTCAACATCCTCCGCCCACGACGCACG TCCAGCACCGGCCCGACGAAACCGCGCCTCATCCCCTGCCGCACAACGCACGCCCGCCTCTTCCCGCAGAAGCAC GCCTTTGCATACTCGTATCTCGTCGTCGGGGTGCCGGTTGGCTTCTCGGGTAGCGCTGGGGGTATCGTCTCGGCG GGGCTGGAGGGAACGTCGTGGTTGGAGAGGGGTTGGTTTGATGTCGATGCTGGGGATTATCTGTTTAGAGGCGCC GGTGGGCTTGGTCTGAGGGGGAAGTTGGACGACTTTCTTCGCTCTGAGGTTCGTTTACCTTGAGCTTTCTTGGGA CTTTGCTGATTGTGATGGCAGCATGTTGATCCCAGCGACTATCCGCACGCATACCTCCTCACAGCCGCCCGCTTC CTAGGCTACCACTTCAACCCAGTCTCCTTCTGGTTCCTCTACACAGCAGAAAAGCACCTCTCGGCCATGATCCTC GAAGTAAACAACACCTTTGGCGAAAGACGACCCTACCTCGTCTTCCGAAACGAGCAGCACGACGACATCAAAGCC TCATGGCCCAAAGACTTTCACGTCTCGCCCTTTAATTCCCGCCATGGAAGCTACACCGTCACCGCAAGCGATCCC CTCGGTCCCGGGATGGATGGCTTCCGCGGGCTGGACGTCTCTATCCGTCTGCGCTCGTCCAAGGGGCGGGCTAAG CTTGTTGCTCGTCTGTTTTCCGAGGGGGATGCCATTGACGCGTCGCTGATGAGCGCGAGGCAGCGGTTTGGATTC CTCGTTGCTTGGTGTTGGGTGGGGTTCGTGACGTTTCCTCGGATTGTGAGGGAGGCGGCTGCGCTGTATGTCCGG CGGGGACTGCATGTTTGGTATCGGCCTGAGCCGTTGAGGGGGAGTTTGGGGAGGGTTGCGGATGGGGGGGAGCGA TGCCTGGAGCGCGTGTTTCGGGGGTATTTGCAGTCTCTGGTTGAGGAGAAGGGCGTCTCCGTCAGATATATCCCC AGCGGCGTCGTCGATGGACCTGCTTCTTACACGTGGACGGCAAACGAGGTTGTCGAGCACGTCGAGGTGCGGGTT TTGACGCCCGTCTTTTACTCTCGGTTCGTTGGCTACGTCGACAGCTTGGAAGCTGTGTTGGTGGAGATGACGGTG AGCGGAACGGTATGGATTGATAACCCGCAAGGTCTGTCAGTGTTATTCTCTCCCTCGACAGACGAATCTCTACCG TCGATGAGTTGGAGAGACAGCATCTTGTTCCAACTCATCCGGAACCTCCGCAGACGACCCGCAGCCATTCCCCAA CCACCACCCCCAAGCTCAACACCCAGTCCTCCCTCAATACCCGCAATGCAAAAGCACCTCTTCTCTCCCCTCGAC GCCTTCATCATCAGACTCCCAGCCCACTCGGCTTTCAAAGCAGAATACTGCAATGCTGCCCTCCGCCTCTTCCTC TCCGAGCGCCTCCTCCTCGTCGACGCGATCCTGCTGCTTGCGCGCGCGGGCCTCGCTTTCCTGACGGCCGGGGTG GTACGAGGGTTGGTGAGCGGGTTTGCCGCGGTATGATGGTGCCCTAAGCGTGCGTTTGTCGGCCGCTATGCCGGT CTGCGTTAGGGTCGGCTTTGGCGGGTGGTGAGGGTTTGACGGTGATGATGGCGGTTATGGTGGTTGATGATGTTG GAGAAGACGGGGGTTGATGGTTGGATGGATTGGTCAAGGTGAGTCGTCTTGAGATGATGGAGATGAACAGAAGCA GCTTCAACCGTCAACTTCAACAAGAAGAAACAAAAGACGAAGAAACCGCGTCATAAGCTTTATCCCGCCCCGCCT GTCGAACTTGTCCTGATGCGTTCCCGAGACACAGACAGCTCTCGTCACCCTATAAGACATTCAAGCCCGCTCTCT CCCTCAACCAACCAAGCTCAACTTCACCCTCTCACACTCCTCAACTCAGACTCCAAGATGCCGCTCTCAGGTCAC TGCCTCTGCAAGGCCGTCACGTACAAGGCCGACGTTGACGCTCCTCTCATGACGGGCTACGACCACTGCGACGAC TGCCAGCGTCAAACGGGCTCGACATACTGTACTATTATTCCCTGCGGTCTCCTCTCGTCCGGTTGGAAGCTAAAA CGACGCAGCCCTCGTCGCCCTCGTCCCCAAGGCAAAGCTCACCATCAACGGCCCCGTCAAGAAATGGTCGGGCAA GGGCTCTTCGGGCAAGGAGGTGCATCGTCTTTTCTGCTCCGAGTGCGGGTCGCCCATTGCTCATGATCCGGATGC CGTGCCGGAAATCATTGTTCTGAAGGCGGGGACGCTGGATAAGGAGATTCGTGAGAAGCTGAAGCCGGTGAGTTT TCTTCCGGAATTTGTCGTTGGGGTTGAGGCTGACTTGGAGAAGGATACCGAGATTTGGACGGCGGGCAAGTTGCC GTTTTGTCAGGAGAAGCTGGCCAAGGCTTTTACACATATGCCGCAGTAA |