Protein ID | Ophun1|3411 |
Gene name | |
Location | Contig_301:8955..12110 |
Strand | + |
Gene length (bp) | 3155 |
Transcript length (bp) | 2928 |
Coding sequence length (bp) | 2928 |
Protein length (aa) | 976 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 3.0E-05 | 779 | 818 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.1E-06 | 777 | 841 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 6.8E-07 | 780 | 855 |
PF13191 | AAA_16 | AAA ATPase domain | 8.1E-08 | 150 | 277 |
PF05729 | NACHT | NACHT domain | 8.2E-07 | 157 | 275 |
PF13401 | AAA_22 | AAA domain | 2.1E-06 | 152 | 287 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|3411 MTSWDGDAEQTQQTRASEQQLLHQFGCSTLEQTTMRWTMIEKQYRTKCIYEDKPTTGLGIVVTGEEDNLSQLDAE HNELGFKWLRFAGAFGRIVYLENRSPIRDMSDQLKTAINCRLALSKSFPHDQRPGRILSDADLSIMDGEWNFTLE QAGGIFTVIGSSGFGKTTLAKHVAQSRAQNMQVGRVLSFYFSKADYRRRSYRDLLYSFVLQLLYDKLDAFQSAHM EKIFSSVTNMSKLTSPNLFGLLRAMMAALGQRTFVIIIDSIHECDEESRKQLMDDLKIIYESAEDGDVLIMVTCK LTEDIEQSLGPFDINNSFELVDWMGDARATTLRQFDDSAALREFRAVMRERNATPLTALLAGALTAQNPENVPNP RSLNSYGEFYRAILSRTPGDKTWIRDILCLVAYSDRPLTIPELAVALIVDRSAWEGERITLESVRIAVTEGLLTE LSRTLRESLPHLVFIKDNAVHLVSDTFRKYIRQQPQLGLRMPHFGGAPATDRTLRCLMLRKCLTILSIPEILRTF ANYAGYSLKRIMNDSIADFTGREAKLVRDEIMEFWNNRETRKWWIKTFHEDIDPSQPSLLLAAVLGLRPVLQSLL ENVEDKNSIRAVALAAVKHDQLETLRLLSDALIDDDSSAEEDPGDSALEVEFTFMAINEACKSSSVGLADYILSD SPRIPIDDIKKNLVVLAGNGNWHIAPRLLQEGVCFVRTLGREVVVSLIEKAASLGREGFIQSLLGKCKLDREFDS LLKVNVQLDNAFFNAAVFGSAEVAVSDAAFHAAAMNGNTEFVMKMLNYGMNVNALDHNFKTALHKAIEKQICNED MIDLLVSKDCSIDQQDGEGHSVFYYAIRNNFKFTRNLWDPRHEISKRGISILFDAASKGNAGRVRQLLAAGYDKD EKDKWGRTAADVAVQANVRALLVESEEPRGRACRMVQSEDVVSRLWACYNCQQVLDNVAFYRELHPRTYIWFPLF * |
Coding | >Ophun1|3411 ATGACTTCCTGGGACGGTGACGCCGAACAGACTCAACAGACCCGGGCAAGCGAGCAGCAACTGCTTCATCAGTTT GGATGTTCGACTCTGGAGCAGACGACGATGCGCTGGACAATGATTGAGAAACAATATCGGACCAAGTGCATTTAC GAAGACAAGCCAACGACTGGCCTGGGCATTGTAGTGACCGGGGAAGAAGACAACCTTAGTCAACTGGACGCAGAA CACAACGAGCTTGGCTTCAAGTGGTTGAGGTTCGCGGGAGCCTTTGGCAGAATCGTCTATCTGGAGAACCGTAGC CCAATCAGGGACATGTCGGACCAACTCAAGACCGCCATCAATTGTCGTTTAGCTCTTTCCAAATCTTTCCCGCAC GACCAAAGACCAGGAAGGATCCTCAGCGATGCAGACTTGTCCATCATGGACGGTGAATGGAACTTTACTCTCGAA CAAGCAGGCGGCATATTCACTGTTATTGGCAGTTCAGGATTTGGAAAGACGACGCTGGCTAAACACGTCGCTCAA AGCAGGGCACAGAACATGCAAGTCGGAAGGGTACTATCCTTCTACTTCAGCAAGGCCGACTACCGCAGACGGTCA TACCGAGATCTGCTGTACTCTTTTGTTCTTCAACTCTTATACGACAAGCTCGATGCTTTTCAGAGCGCACATATG GAAAAGATCTTTTCTAGCGTGACGAACATGTCCAAGTTGACGTCGCCGAATCTTTTTGGACTCTTGCGGGCCATG ATGGCAGCTTTGGGCCAGAGGACTTTTGTCATCATCATCGATTCGATCCATGAGTGCGACGAGGAGAGCAGGAAG CAACTGATGGATGATCTGAAAATCATCTACGAGTCTGCTGAGGACGGAGACGTCTTGATCATGGTGACTTGCAAA CTCACCGAGGACATTGAACAAAGCCTGGGCCCATTTGACATCAACAACAGCTTCGAACTGGTTGACTGGATGGGA GACGCAAGAGCGACTACGCTGAGGCAGTTCGATGACAGTGCAGCGCTTCGGGAATTCAGGGCTGTGATGCGTGAG CGGAATGCAACGCCCCTGACGGCACTGCTGGCCGGAGCCTTGACAGCTCAAAACCCTGAGAATGTCCCGAATCCC AGGTCGTTGAACAGCTATGGCGAATTCTATCGTGCCATTCTCTCGCGTACCCCTGGAGACAAGACCTGGATTCGA GACATCTTGTGCCTGGTCGCCTATTCCGACCGACCCCTGACAATCCCTGAGCTGGCTGTGGCCCTCATCGTGGAC CGCTCCGCTTGGGAGGGCGAAAGGATAACCCTGGAAAGCGTCCGGATTGCTGTGACGGAGGGGCTGCTCACTGAA CTGTCACGGACTCTGAGGGAGTCGCTTCCGCACCTGGTTTTCATCAAAGACAACGCTGTTCACCTCGTCAGCGAC ACGTTCCGCAAGTATATTCGTCAACAGCCGCAGCTTGGTCTTCGCATGCCTCATTTCGGGGGGGCTCCGGCTACG GACAGGACTTTGCGGTGTCTCATGCTGCGCAAGTGTCTTACTATCCTCTCTATTCCTGAGATACTTCGCACTTTT GCAAACTACGCTGGCTACTCTCTGAAACGAATTATGAACGATTCCATTGCGGATTTCACTGGTCGAGAAGCCAAG CTGGTCAGAGACGAAATCATGGAATTCTGGAACAACAGAGAGACTCGGAAGTGGTGGATCAAGACGTTTCACGAG GATATCGATCCATCGCAGCCATCCCTGTTGTTGGCGGCTGTTTTGGGATTGCGGCCCGTGCTGCAGTCTTTGTTG GAGAACGTCGAGGACAAGAATTCGATTCGAGCCGTGGCATTGGCCGCCGTGAAACACGATCAGTTGGAAACGCTC CGGTTGCTCTCAGACGCTCTTATCGATGACGACTCGTCGGCTGAGGAGGATCCAGGTGACTCTGCACTTGAAGTG GAGTTTACCTTCATGGCCATCAACGAGGCCTGCAAGTCCAGCTCCGTTGGTCTTGCAGACTACATCCTCTCCGAC TCCCCACGCATCCCAATCGACGACATCAAGAAGAATCTCGTCGTTCTAGCGGGCAACGGAAACTGGCACATTGCC CCTCGACTGCTGCAAGAGGGCGTCTGCTTCGTCCGGACTCTCGGCCGGGAGGTTGTCGTGTCGCTGATTGAAAAG GCGGCGTCTTTGGGCAGAGAGGGCTTCATTCAGTCGCTGCTGGGCAAGTGTAAGCTTGACCGGGAGTTTGACAGC CTTTTGAAAGTCAATGTTCAGCTTGACAATGCGTTTTTCAACGCGGCTGTGTTTGGGAGCGCCGAGGTGGCTGTG AGCGACGCAGCGTTCCATGCGGCTGCGATGAACGGAAATACCGAGTTTGTGATGAAAATGCTCAACTATGGAATG AACGTCAATGCCCTCGACCACAACTTCAAGACGGCTCTGCACAAAGCCATCGAAAAACAAATCTGCAACGAGGAC ATGATCGATCTTCTCGTCTCCAAAGACTGCTCAATCGACCAACAAGACGGTGAAGGCCACTCGGTATTCTACTAC GCCATCAGAAACAACTTCAAGTTCACACGCAACCTCTGGGACCCGCGCCACGAAATCTCCAAGCGAGGCATCTCG ATTCTCTTCGACGCGGCCTCCAAGGGTAACGCTGGGAGGGTGAGGCAACTACTCGCAGCAGGGTACGACAAGGAC GAAAAGGACAAATGGGGGAGAACGGCAGCAGACGTCGCCGTCCAAGCCAACGTTCGCGCCCTGCTCGTCGAGTCT GAGGAGCCTCGTGGACGGGCATGTCGAATGGTTCAGTCCGAGGACGTTGTGAGTCGACTTTGGGCGTGTTACAAC TGCCAGCAGGTCCTCGATAACGTGGCCTTTTACCGTGAGCTTCACCCGCGAACATACATATGGTTTCCGCTGTTC TGA |
Transcript | >Ophun1|3411 ATGACTTCCTGGGACGGTGACGCCGAACAGACTCAACAGACCCGGGCAAGCGAGCAGCAACTGCTTCATCAGTTT GGATGTTCGACTCTGGAGCAGACGACGATGCGCTGGACAATGATTGAGAAACAATATCGGACCAAGTGCATTTAC GAAGACAAGCCAACGACTGGCCTGGGCATTGTAGTGACCGGGGAAGAAGACAACCTTAGTCAACTGGACGCAGAA CACAACGAGCTTGGCTTCAAGTGGTTGAGGTTCGCGGGAGCCTTTGGCAGAATCGTCTATCTGGAGAACCGTAGC CCAATCAGGGACATGTCGGACCAACTCAAGACCGCCATCAATTGTCGTTTAGCTCTTTCCAAATCTTTCCCGCAC GACCAAAGACCAGGAAGGATCCTCAGCGATGCAGACTTGTCCATCATGGACGGTGAATGGAACTTTACTCTCGAA CAAGCAGGCGGCATATTCACTGTTATTGGCAGTTCAGGATTTGGAAAGACGACGCTGGCTAAACACGTCGCTCAA AGCAGGGCACAGAACATGCAAGTCGGAAGGGTACTATCCTTCTACTTCAGCAAGGCCGACTACCGCAGACGGTCA TACCGAGATCTGCTGTACTCTTTTGTTCTTCAACTCTTATACGACAAGCTCGATGCTTTTCAGAGCGCACATATG GAAAAGATCTTTTCTAGCGTGACGAACATGTCCAAGTTGACGTCGCCGAATCTTTTTGGACTCTTGCGGGCCATG ATGGCAGCTTTGGGCCAGAGGACTTTTGTCATCATCATCGATTCGATCCATGAGTGCGACGAGGAGAGCAGGAAG CAACTGATGGATGATCTGAAAATCATCTACGAGTCTGCTGAGGACGGAGACGTCTTGATCATGGTGACTTGCAAA CTCACCGAGGACATTGAACAAAGCCTGGGCCCATTTGACATCAACAACAGCTTCGAACTGGTTGACTGGATGGGA GACGCAAGAGCGACTACGCTGAGGCAGTTCGATGACAGTGCAGCGCTTCGGGAATTCAGGGCTGTGATGCGTGAG CGGAATGCAACGCCCCTGACGGCACTGCTGGCCGGAGCCTTGACAGCTCAAAACCCTGAGAATGTCCCGAATCCC AGGTCGTTGAACAGCTATGGCGAATTCTATCGTGCCATTCTCTCGCGTACCCCTGGAGACAAGACCTGGATTCGA GACATCTTGTGCCTGGTCGCCTATTCCGACCGACCCCTGACAATCCCTGAGCTGGCTGTGGCCCTCATCGTGGAC CGCTCCGCTTGGGAGGGCGAAAGGATAACCCTGGAAAGCGTCCGGATTGCTGTGACGGAGGGGCTGCTCACTGAA CTGTCACGGACTCTGAGGGAGTCGCTTCCGCACCTGGTTTTCATCAAAGACAACGCTGTTCACCTCGTCAGCGAC ACGTTCCGCAAGTATATTCGTCAACAGCCGCAGCTTGGTCTTCGCATGCCTCATTTCGGGGGGGCTCCGGCTACG GACAGGACTTTGCGGTGTCTCATGCTGCGCAAGTGTCTTACTATCCTCTCTATTCCTGAGATACTTCGCACTTTT GCAAACTACGCTGGCTACTCTCTGAAACGAATTATGAACGATTCCATTGCGGATTTCACTGGTCGAGAAGCCAAG CTGGTCAGAGACGAAATCATGGAATTCTGGAACAACAGAGAGACTCGGAAGTGGTGGATCAAGACGTTTCACGAG GATATCGATCCATCGCAGCCATCCCTGTTGTTGGCGGCTGTTTTGGGATTGCGGCCCGTGCTGCAGTCTTTGTTG GAGAACGTCGAGGACAAGAATTCGATTCGAGCCGTGGCATTGGCCGCCGTGAAACACGATCAGTTGGAAACGCTC CGGTTGCTCTCAGACGCTCTTATCGATGACGACTCGTCGGCTGAGGAGGATCCAGGTGACTCTGCACTTGAAGTG GAGTTTACCTTCATGGCCATCAACGAGGCCTGCAAGTCCAGCTCCGTTGGTCTTGCAGACTACATCCTCTCCGAC TCCCCACGCATCCCAATCGACGACATCAAGAAGAATCTCGTCGTTCTAGCGGGCAACGGAAACTGGCACATTGCC CCTCGACTGCTGCAAGAGGGCGTCTGCTTCGTCCGGACTCTCGGCCGGGAGGTTGTCGTGTCGCTGATTGAAAAG GCGGCGTCTTTGGGCAGAGAGGGCTTCATTCAGTCGCTGCTGGGCAAGTGTAAGCTTGACCGGGAGTTTGACAGC CTTTTGAAAGTCAATGTTCAGCTTGACAATGCGTTTTTCAACGCGGCTGTGTTTGGGAGCGCCGAGGTGGCTGTG AGCGACGCAGCGTTCCATGCGGCTGCGATGAACGGAAATACCGAGTTTGTGATGAAAATGCTCAACTATGGAATG AACGTCAATGCCCTCGACCACAACTTCAAGACGGCTCTGCACAAAGCCATCGAAAAACAAATCTGCAACGAGGAC ATGATCGATCTTCTCGTCTCCAAAGACTGCTCAATCGACCAACAAGACGGTGAAGGCCACTCGGTATTCTACTAC GCCATCAGAAACAACTTCAAGTTCACACGCAACCTCTGGGACCCGCGCCACGAAATCTCCAAGCGAGGCATCTCG ATTCTCTTCGACGCGGCCTCCAAGGGTAACGCTGGGAGGGTGAGGCAACTACTCGCAGCAGGGTACGACAAGGAC GAAAAGGACAAATGGGGGAGAACGGCAGCAGACGTCGCCGTCCAAGCCAACGTTCGCGCCCTGCTCGTCGAGTCT GAGGAGCCTCGTGGACGGGCATGTCGAATGGTTCAGTCCGAGGACGTTGTGAGTCGACTTTGGGCGTGTTACAAC TGCCAGCAGGTCCTCGATAACGTGGCCTTTTACCGTGAGCTTCACCCGCGAACATACATATGGTTTCCGCTGTTC TGA |
Gene | >Ophun1|3411 ATGACTTCCTGGGACGGTGACGCCGAACAGACTCAACAGACCCGGGCAAGCGAGCAGCAACTGCTTCATCAGTTT GGATGTTCGACTCTGGAGCAGACGACGATGCGCTGGACAATGATTGAGAAACAATATCGGACCAAGTGCATTTAC GAAGACAAGCCAACGACTGGCCTGGGCATTGTAGTGAGTACATGCAGCCAGATCCATACTGCAAGAAGCGTTGAA ACTGACGATGTTGAAGGTGACCGGGGAAGAAGACAACCTTAGTCAACTGGACGCAGAACACAACGAGCTTGGCTT CAAGTGGTTGAGGTTCGCGGGAGCCTTTGGCAGAATCGTCTATCTGGAGAACCGTAGCCCAATCAGGGACATGTC GGACCAACTCAAGACCGCCATCAATTGTCGTTTAGCTCTTTCCAAATCTTTCCCGCACGACCAAAGACCAGGAAG GATCCTCAGCGATGCAGACTTGTCCATCATGGACGGTGAATGGAACTTTACTCTCGAACAAGCAGGCGGCATATT CACTGTTATTGGCAGTTCAGGATTTGGAAAGACGACGCTGGCTAAACACGTCGCTCAAAGCAGGGCACAGAACAT GCAAGTCGGAAGGGTACTATCCTTCTACTTCAGCAAGGCCGACTACCGCAGACGGTCATACCGAGATCTGCTGTA CTCTTTTGTTCTTCAACTCTTATACGACAAGCTCGATGCTTTTCAGAGCGCACATATGGAAAAGATCTTTTCTAG CGTGACGAACATGTCCAAGTTGACGTCGCCGAATCTTTTTGGACTCTTGCGGGCCATGATGGCAGCTTTGGGCCA GAGGACTTTTGTCATCATCATCGATTCGATCCATGAGTGCGACGAGGAGAGCAGGAAGCAACTGATGGATGATCT GAAAATCATCTACGAGTCTGCTGAGGACGGAGACGTCTTGATCATGGTGACTTGCAAACTCACCGAGGACATTGA ACAAAGCCTGGGCCCATTTGACATCAACAACAGCTTCGAACTGGTTGACTGGATGGGAGACGCAAGAGCGACTAC GCTGAGGCAGTTCGATGACAGTGCAGCGCTTCGGGAATTCAGGGCTGTGATGCGTGAGCGGAATGCAACGCCCCT GACGGCACTGCTGGCCGGAGCCTTGACAGCTCAAAACCCTGAGAATGTCCCGAATCCCAGGTCGTTGAACAGCTA TGGCGAATTCTATCGTGCCATTCTCTCGCGTACCCCTGGAGACAAGACCTGGATTCGAGACATCTTGTGCCTGGT CGCCTATTCCGACCGACCCCTGACAATCCCTGAGCTGGCTGTGGCCCTCATCGTGGACCGCTCCGCTTGGGAGGG CGAAAGGATAACCCTGGAAAGCGTCCGGATTGCTGTGACGGAGGGGCTGCTCACTGAACTGTCACGGACTCTGAG GGAGTCGCTTCCGCACCTGGTTTTCATCAAAGACAACGCTGTTCACCTCGTCAGCGACACGTTCCGCAAGTATAT TCGTCAACAGCCGCAGCTTGGTCTTCGCATGCCTCATTTCGGGGGGGCTCCGGCTACGGACAGGACTTTGCGGTG TCTCATGCTGCGCAAGTGTCTTACTATCCTCTCTATTCCTGAGATACGTGAGCCTGGCATGTTGCCGATTGAGAC GGACTTTTATGCCGTTCTTAACCTCGCAGGACCAGTTCGCACTTTTGCAAACTACGCTGGCTACTCTCTGAAACG AATTATGAACGATTCCATTGCGGATTTCACTGGTCGAGAAGCCAAGCTGGTCAGAGACGAAATCATGGAATTCTG GAACAACAGAGAGACTCGGAAGTGGTGGATCAAGACGTTTCACGAGGATATCGATCCATCGCAGCCATCCCTGTT GTTGGCGGCTGTTTTGGGATTGCGGCCCGTGCTGCAGTCTTTGTTGGAGAACGTCGAGGACAAGAATTCGATTCG AGCCGTGGCATTGGCCGCCGTGAAACACGATCAGTTGGAAACGCTCCGGTTGCTCTCAGACGCTCTTATCGATGA CGACTCGTCGGCTGAGGAGGATCCAGGTGACTCTGCACTTGAAGTGGAGTTTACCTTCATGGCCATCAACGAGGC CTGCAAGTCCAGCTCCGTTGGTCTTGCAGACTACATCCTCTCCGACTCCCCACGCATCCCAATCGACGACATCAA GAAGAATCTCGTCGTTCTAGCGGGCAACGGAAACTGGCACATTGCCCCTCGACTGCTGCAAGAGGGCGTCTGCTT CGTCCGGACTCTCGGCCGGGAGGTTGTCGTGTCGCTGATTGAAAAGGCGGCGTCTTTGGGCAGAGAGGGCTTCAT TCAGTCGCTGCTGGGCAAGTGTAAGCTTGACCGGGAGTTTGACAGCCTTTTGAAAGTCAATGTTCAGCTTGACAA TGCGTTTTTCAACGCGGCTGTGTTTGGGAGCGCGTATGTGTTTGAGCTGTTGATGCCATACGTCGCTCCTGGCGT GGCGATCAGCGAGGTGGCTGTGAGCGACGCAGCGTTCCATGCGGCTGCGATGAGTATGTTCTGTTGATTTGAGTT GAGAACTGGAGAGATAACTAACTGACCTTGCAGACGGAAATACCGAGTTTGTGATGAAAATGCTCAACTATGGAA TGAACGTCAATGCCCTCGACCACAACTTCAAGACGGCTCTGCACAAAGCCATCGAAAAACAAATCTGCAACGAGG ACATGATCGATCTTCTCGTCTCCAAAGACTGCTCAATCGACCAACAAGACGGTGAAGGCCACTCGGTATTCTACT ACGCCATCAGAAACAACTTCAAGTTCACACGCAACCTCTGGGACCCGCGCCACGAAATCTCCAAGCGAGGCATCT CGATTCTCTTCGACGCGGCCTCCAAGGGTAACGCTGGGAGGGTGAGGCAACTACTCGCAGCAGGGTACGACAAGG ACGAAAAGGACAAATGGGGGAGAACGGCAGCAGACGTCGCCGTCCAAGCCAACGTTCGCGCCCTGCTCGTCGAGT CTGAGGAGCCTCGTGGACGGGCATGTCGAATGGTTCAGTCCGAGGACGTTGTGAGTCGACTTTGGGCGTGTTACA ACTGCCAGCAGGTCCTCGATAACGTGGCCTTTTACCGTGAGCTTCACCCGCGAACATACATATGGTTTCCGCTGT TCTGA |