© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|3379 |
| Gene name | |
| Location | Contig_30:9980..11145 |
| Strand | + |
| Gene length (bp) | 1165 |
| Transcript length (bp) | 984 |
| Coding sequence length (bp) | 984 |
| Protein length (aa) | 328 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00650 | CRAL_TRIO | CRAL/TRIO domain | 1.5E-35 | 103 | 264 |
| PF03765 | CRAL_TRIO_N | CRAL/TRIO, N-terminal domain | 1.2E-06 | 49 | 76 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10137|SEC14_SCHPO | Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=3 SV=1 | 12 | 285 | 9.0E-121 |
| sp|P24859|SEC14_KLULA | SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2 | 21 | 288 | 4.0E-109 |
| sp|P45816|SEC14_YARLI | SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2 | 22 | 288 | 9.0E-106 |
| sp|Q75DK1|SEC14_ASHGO | SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2 | 16 | 305 | 3.0E-105 |
| sp|P53989|SEC14_CANGA | SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1 | 22 | 288 | 5.0E-105 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10137|SEC14_SCHPO | Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=3 SV=1 | 12 | 285 | 9.0E-121 |
| sp|P24859|SEC14_KLULA | SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2 | 21 | 288 | 4.0E-109 |
| sp|P45816|SEC14_YARLI | SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2 | 22 | 288 | 9.0E-106 |
| sp|Q75DK1|SEC14_ASHGO | SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2 | 16 | 305 | 3.0E-105 |
| sp|P53989|SEC14_CANGA | SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1 | 22 | 288 | 5.0E-105 |
| sp|P24280|SEC14_YEAST | SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 | 22 | 288 | 1.0E-104 |
| sp|P46250|SEC14_CANAL | SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1 | 15 | 288 | 1.0E-96 |
| sp|P33324|YKJ1_YEAST | CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2 | 22 | 288 | 7.0E-95 |
| sp|F4JLE5|SFH1_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH1 OS=Arabidopsis thaliana GN=SFH1 PE=2 SV=1 | 27 | 289 | 4.0E-60 |
| sp|F4JVA9|SFH2_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Arabidopsis thaliana GN=SFH2 PE=2 SV=1 | 52 | 287 | 7.0E-60 |
| sp|Q93ZE9|SFH3_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 OS=Arabidopsis thaliana GN=SFH3 PE=2 SV=1 | 52 | 287 | 8.0E-60 |
| sp|Q9SI13|SFH10_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 OS=Arabidopsis thaliana GN=SFH10 PE=3 SV=1 | 29 | 287 | 5.0E-57 |
| sp|F4HP88|SFH4_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH4 OS=Arabidopsis thaliana GN=SFH4 PE=2 SV=1 | 29 | 290 | 5.0E-57 |
| sp|Q94A34|SFH12_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH12 OS=Arabidopsis thaliana GN=SFH12 PE=2 SV=1 | 27 | 287 | 7.0E-57 |
| sp|Q9SIW3|SFH7_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH7 OS=Arabidopsis thaliana GN=SFH7 PE=2 SV=2 | 26 | 290 | 2.0E-55 |
| sp|F4J7S8|SFH9_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH9 OS=Arabidopsis thaliana GN=SFH9 PE=2 SV=1 | 52 | 287 | 2.0E-54 |
| sp|F4JVA6|SFH6_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1 | 52 | 287 | 2.0E-53 |
| sp|Q8GXC6|SFH5_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH5 OS=Arabidopsis thaliana GN=SFH5 PE=2 SV=1 | 27 | 287 | 2.0E-53 |
| sp|F4IHJ0|SFH8_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana GN=SFH8 PE=2 SV=1 | 15 | 287 | 5.0E-52 |
| sp|F4JYJ3|SFH11_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 OS=Arabidopsis thaliana GN=SFH11 PE=3 SV=1 | 52 | 283 | 7.0E-52 |
| sp|F4K6D3|SFH14_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH14 OS=Arabidopsis thaliana GN=SFH14 PE=2 SV=1 | 56 | 284 | 4.0E-46 |
| sp|Q501H5|SFH13_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 OS=Arabidopsis thaliana GN=SFH13 PE=2 SV=1 | 39 | 287 | 6.0E-43 |
| sp|Q16KN5|RETM_AEDAE | Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1 | 23 | 266 | 1.0E-25 |
| sp|Q03606|YN02_CAEEL | CRAL-TRIO domain-containing protein T23G5.2 OS=Caenorhabditis elegans GN=T23G5.2 PE=3 SV=3 | 56 | 266 | 4.0E-24 |
| sp|Q7PWB1|RETM_ANOGA | Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4 | 23 | 269 | 3.0E-23 |
| sp|Q0V9N0|S14L5_XENTR | SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1 | 23 | 268 | 4.0E-23 |
| sp|O43304|S14L5_HUMAN | SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE=2 SV=3 | 25 | 271 | 6.0E-23 |
| sp|Q29JQ0|RETM_DROPS | Protein real-time OS=Drosophila pseudoobscura pseudoobscura GN=retm PE=3 SV=1 | 25 | 267 | 1.0E-21 |
| sp|Q92503|S14L1_HUMAN | SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2 | 56 | 268 | 1.0E-21 |
| sp|Q8R0F9|S14L4_MOUSE | SEC14-like protein 4 OS=Mus musculus GN=Sec14l4 PE=1 SV=1 | 22 | 271 | 6.0E-21 |
| sp|Q9VMD6|RETM_DROME | Protein real-time OS=Drosophila melanogaster GN=retm PE=1 SV=2 | 25 | 267 | 2.0E-20 |
| sp|Q99MS0|S14L2_RAT | SEC14-like protein 2 OS=Rattus norvegicus GN=Sec14l2 PE=1 SV=1 | 52 | 271 | 6.0E-20 |
| sp|Q9UDX3|S14L4_HUMAN | SEC14-like protein 4 OS=Homo sapiens GN=SEC14L4 PE=1 SV=1 | 52 | 271 | 7.0E-20 |
| sp|Q99J08|S14L2_MOUSE | SEC14-like protein 2 OS=Mus musculus GN=Sec14l2 PE=1 SV=1 | 52 | 271 | 1.0E-19 |
| sp|O76054|S14L2_HUMAN | SEC14-like protein 2 OS=Homo sapiens GN=SEC14L2 PE=1 SV=1 | 52 | 271 | 3.0E-19 |
| sp|P58875|S14L2_BOVIN | SEC14-like protein 2 OS=Bos taurus GN=SEC14L2 PE=1 SV=2 | 52 | 271 | 1.0E-18 |
| sp|Q9Z1J8|S14L3_RAT | SEC14-like protein 3 OS=Rattus norvegicus GN=Sec14l3 PE=1 SV=1 | 52 | 271 | 4.0E-18 |
| sp|Q9UDX4|S14L3_HUMAN | SEC14-like protein 3 OS=Homo sapiens GN=SEC14L3 PE=1 SV=1 | 52 | 271 | 5.0E-18 |
| sp|Q757H2|CSR1_ASHGO | Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2 | 41 | 267 | 3.0E-17 |
| sp|B5MCN3|S14L6_HUMAN | Putative SEC14-like protein 6 OS=Homo sapiens GN=SEC14L6 PE=5 SV=1 | 21 | 271 | 4.0E-16 |
| sp|Q10138|YAS2_SCHPO | CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1 | 56 | 264 | 2.0E-14 |
| sp|Q56Z59|PATL3_ARATH | Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2 | 49 | 272 | 5.0E-13 |
| sp|P49193|RALB_TODPA | Retinal-binding protein OS=Todarodes pacificus PE=1 SV=2 | 113 | 265 | 2.0E-11 |
| sp|Q06705|CSR1_YEAST | Phosphatidylinositol transfer protein CSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSR1 PE=1 SV=1 | 55 | 264 | 1.0E-10 |
| sp|Q9HDZ5|YKP9_SCHPO | CRAL-TRIO domain-containing protein C589.09, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC589.09 PE=3 SV=1 | 56 | 264 | 2.0E-10 |
| sp|Q19895|YUQP_CAEEL | CRAL-TRIO domain-containing protein F28H7.8 OS=Caenorhabditis elegans GN=F28H7.8 PE=3 SV=2 | 33 | 266 | 3.0E-10 |
| sp|Q9M0R2|PATL5_ARATH | Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2 | 49 | 278 | 3.0E-10 |
| sp|Q9UU99|YJX4_SCHPO | CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC23B6.04c PE=1 SV=1 | 56 | 265 | 8.0E-09 |
| sp|Q9UUC2|YGR1_SCHPO | CRAL-TRIO domain-containing protein C365.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC365.01 PE=2 SV=1 | 54 | 240 | 2.0E-08 |
| sp|Q94C59|PATL4_ARATH | Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2 | 54 | 264 | 4.0E-08 |
| sp|Q9SCU1|PATL6_ARATH | Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1 | 46 | 279 | 4.0E-08 |
| sp|Q55CU8|RSC5_DICDI | Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1 | 54 | 267 | 1.0E-07 |
| sp|Q56WK6|PATL1_ARATH | Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2 | 49 | 264 | 3.0E-07 |
| Orthofinder run ID | 4 |
| Orthogroup | 1932 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|3379 MDLNDKYDDYDFPHTAAEEKDGHAGYLTAEQIAQVHQLRMMLETDGYTDRLDTLTLLRFLRARKFDVNLSKQMFV DCEKWRKDTNLDEEVPVWEYPERKDVAKYYKQYYHKTDKDGRPMYIETLGGIDLTAMYKITTPERMLTNLAVEYE RLADPRLPACSRKAGKLLETCCTVMDLKGVTLTKVPQVYQYVKQASVISQNYYPERLGKLYLINAPWGFSTVWSV VKGWLDPVTVAKINILGSGYKTDLLKQIPAECLPKAFGGTCECPGGCENSDAGPWHDPEWAKPAKWELKAKKKEE IPDAAVQDHKAPVETADKDDGNQMAMA* |
| Coding | >Ophun1|3379 ATGGATCTCAACGACAAGTACGACGACTACGACTTCCCGCACACCGCGGCGGAAGAGAAGGACGGTCATGCGGGA TATTTGACGGCGGAGCAGATTGCGCAGGTTCATCAGCTACGTATGATGCTCGAGACGGATGGCTACACTGACCGG CTCGATACCCTGACCTTGCTGCGATTCCTGCGAGCCCGCAAGTTTGATGTCAACCTCTCCAAGCAGATGTTCGTC GACTGTGAGAAATGGCGCAAGGATACCAATCTTGACGAAGAGGTGCCCGTCTGGGAATATCCCGAGAGGAAGGAT GTGGCCAAGTACTACAAGCAGTATTACCACAAGACTGACAAGGATGGACGTCCTATGTACATCGAGACCCTGGGC GGCATCGATCTAACGGCCATGTACAAAATCACGACGCCGGAACGTATGCTCACCAACCTCGCCGTCGAGTATGAG CGCCTCGCCGACCCCCGTCTCCCGGCCTGTTCGCGCAAGGCCGGCAAGCTTCTCGAGACGTGCTGCACCGTCATG GACCTCAAGGGCGTCACTCTCACTAAGGTGCCGCAGGTATACCAGTATGTCAAGCAGGCCTCGGTCATTTCGCAG AACTATTATCCCGAGCGGCTGGGCAAGCTATACCTCATCAATGCCCCTTGGGGCTTTTCCACCGTCTGGAGCGTC GTCAAGGGCTGGCTGGACCCCGTCACCGTCGCCAAGATCAACATCCTCGGCTCCGGCTACAAGACGGACCTTCTC AAGCAGATCCCGGCCGAATGCCTGCCCAAGGCCTTTGGCGGCACGTGTGAGTGTCCCGGAGGCTGCGAGAACAGC GACGCCGGCCCGTGGCACGACCCGGAGTGGGCCAAGCCGGCCAAGTGGGAGCTCAAGGCCAAGAAGAAGGAGGAG ATCCCGGATGCCGCGGTGCAAGATCATAAAGCCCCGGTCGAGACGGCGGACAAAGATGATGGAAATCAGATGGCC ATGGCTTGA |
| Transcript | >Ophun1|3379 ATGGATCTCAACGACAAGTACGACGACTACGACTTCCCGCACACCGCGGCGGAAGAGAAGGACGGTCATGCGGGA TATTTGACGGCGGAGCAGATTGCGCAGGTTCATCAGCTACGTATGATGCTCGAGACGGATGGCTACACTGACCGG CTCGATACCCTGACCTTGCTGCGATTCCTGCGAGCCCGCAAGTTTGATGTCAACCTCTCCAAGCAGATGTTCGTC GACTGTGAGAAATGGCGCAAGGATACCAATCTTGACGAAGAGGTGCCCGTCTGGGAATATCCCGAGAGGAAGGAT GTGGCCAAGTACTACAAGCAGTATTACCACAAGACTGACAAGGATGGACGTCCTATGTACATCGAGACCCTGGGC GGCATCGATCTAACGGCCATGTACAAAATCACGACGCCGGAACGTATGCTCACCAACCTCGCCGTCGAGTATGAG CGCCTCGCCGACCCCCGTCTCCCGGCCTGTTCGCGCAAGGCCGGCAAGCTTCTCGAGACGTGCTGCACCGTCATG GACCTCAAGGGCGTCACTCTCACTAAGGTGCCGCAGGTATACCAGTATGTCAAGCAGGCCTCGGTCATTTCGCAG AACTATTATCCCGAGCGGCTGGGCAAGCTATACCTCATCAATGCCCCTTGGGGCTTTTCCACCGTCTGGAGCGTC GTCAAGGGCTGGCTGGACCCCGTCACCGTCGCCAAGATCAACATCCTCGGCTCCGGCTACAAGACGGACCTTCTC AAGCAGATCCCGGCCGAATGCCTGCCCAAGGCCTTTGGCGGCACGTGTGAGTGTCCCGGAGGCTGCGAGAACAGC GACGCCGGCCCGTGGCACGACCCGGAGTGGGCCAAGCCGGCCAAGTGGGAGCTCAAGGCCAAGAAGAAGGAGGAG ATCCCGGATGCCGCGGTGCAAGATCATAAAGCCCCGGTCGAGACGGCGGACAAAGATGATGGAAATCAGATGGCC ATGGCTTGA |
| Gene | >Ophun1|3379 ATGGATCTCAACGACAAGTACGACGACTACGACTTCCCGCACACCGCGGCGGAAGAGAAGGACGGTCATGCGGGA TATTTGACGGCGGAGCAGATTGCGCAGGTTCATCAGCTACGTATGATGCTCGAGACGGATGGCTACACTGACCGG CTCGATACCCTGACCTTGGTATGACCTCTCCTACCCCCTCAAGCTTGGCGACGGTAATACGCAGGGAATACTGAC TCGAAGACGTTTCACAGCTGCGATTCCTGCGAGCCCGCAAGTTTGATGTCAACCTCTCCAAGCAGATGTGAGTGT GTCGGTGTTCTCACGAGCTCGCCCTGTGCTGACCGTTTCAGGTTCGTCGACTGTGAGAAATGGCGCAAGGATACC AATCTTGACGAAGAGGTGCCCGTCTGGGAATATCCCGAGAGGAAGGATGTGGCCAAGTACTACAAGCAGTATTAC CACAAGACTGACAAGGTAAGTCATTCATGGTCGTTCTCTATTTCGTACCTCTTGTCTGACGGGCTTCCTCCAGGA TGGACGTCCTATGTACATCGAGACCCTGGGCGGCATCGATCTAACGGCCATGTACAAAATCACGACGCCGGAACG TATGCTCACCAACCTCGCCGTCGAGTATGAGCGCCTCGCCGACCCCCGTCTCCCGGCCTGTTCGCGCAAGGCCGG CAAGCTTCTCGAGACGTGCTGCACCGTCATGGACCTCAAGGGCGTCACTCTCACTAAGGTGCCGCAGGTATACCA GTATGTCAAGCAGGCCTCGGTCATTTCGCAGAACTATTATCCCGAGCGGCTGGGCAAGCTATACCTCATCAATGC CCCTTGGGGCTTTTCCACCGTCTGGAGCGTCGTCAAGGGCTGGCTGGACCCCGTCACCGTCGCCAAGATCAACAT CCTCGGCTCCGGCTACAAGACGGACCTTCTCAAGCAGATCCCGGCCGAATGCCTGCCCAAGGCCTTTGGCGGCAC GTGTGAGTGTCCCGGAGGCTGCGAGAACAGCGACGCCGGCCCGTGGCACGACCCGGAGTGGGCCAAGCCGGCCAA GTGGGAGCTCAAGGCCAAGAAGAAGGAGGAGATCCCGGATGCCGCGGTGCAAGATCATAAAGCCCCGGTCGAGAC GGCGGACAAAGATGATGGAAATCAGATGGCCATGGCTTGA |