Protein ID | Ophun1|3370 |
Gene name | |
Location | Contig_3:90243..93955 |
Strand | - |
Gene length (bp) | 3712 |
Transcript length (bp) | 2664 |
Coding sequence length (bp) | 2664 |
Protein length (aa) | 888 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13391 | HNH_2 | HNH endonuclease | 4.4E-09 | 665 | 749 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 38 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|3370 MADAEEKARQEKIAAARKRVEEMKKKRGIKSGSDKKEGTKEGTKDDTEESTKDSAKEPADENDSASAEPADPPSI AQQSKLRSSSFRAGSLPVSPAPFSPDGDTAPDIYRKHVARIEELEKENKRLAKEAADSERRWNKAEESLSELREA ETRPKGDDGLTEKLENEVASLQRQNAQLQQQASRGHHRLSVSSPLQAELDSKTATIESMEIEISRLKARVERQET GASSEREQVTALEEKLARAEAAAGKAQRELQDAKRNLERATEKAVREGGERSSAETKAKTLESELADVKAAKDEA HLRIEAMEKKVATLTTLHREQDSRSQALRKDKERAEKELSDLRAKMEKLESDNLRLRSRKSVEGGGGLDDEGVDE LEDEERLKLEKKIRSLEREVHELRSGVWIEKRREMETGSFQDVDLGSAQPKKAGFGELIASGFNALAGGGEDDLM DDDFDEDAFRKAQQEEGRKRLERIKENVTMSDQDPSLESKTESHSDSSSLDKLLKEVRVFHNLNRCRPASLAAAS DFLAASHNHSPYTEDLLPMDEANERIELAIKAETAIKEFHPDFEFTSIHAAIVFNAPLNNLRTYVTEPGAGLTLR RAFRSMDQLLQSFTSRGSHQSAAKRAASDELAGGSKQSQGNEQEKSKPRSRAESKKSKDRDQQNCVITGHADPEA CHIIPFTWINTKEKQERNGYLLEPASAILLPEDDVRIATRLVYGTVGATDKAWNMISLNPTLHQSWGRYAFGLKW IGQEDLGNGFSKATIQFHWLPAPEKLNSTSRINVQELRSDWLDKVKSRQANVACHHLSSNQPVLSGDTFALELPT AHVGNFEIVIKVQWALVKIGAMAGAANDPRFHWQHDGPDRIENWIRNVENAGSEAVSEMMLD* |
Coding | >Ophun1|3370 ATGGCCGACGCAGAGGAAAAGGCCCGTCAGGAAAAGATTGCCGCGGCGAGGAAGCGTGTCGAGGAGATGAAGAAG AAGCGAGGCATCAAGAGCGGGAGCGACAAGAAGGAGGGCACCAAGGAGGGCACGAAAGATGACACCGAAGAGTCC ACCAAAGACTCTGCAAAAGAGCCCGCCGACGAAAACGACTCGGCTTCCGCAGAGCCCGCAGACCCCCCCTCCATC GCCCAGCAGTCCAAACTCCGCTCCAGCTCCTTTCGCGCCGGCTCCCTCCCCGTCTCTCCCGCCCCCTTCAGCCCC GACGGAGACACCGCCCCCGACATCTACCGCAAGCACGTCGCCCGCATCGAAGAGCTCGAAAAGGAGAATAAGCGC CTCGCCAAAGAGGCCGCCGACTCCGAACGCCGCTGGAACAAGGCCGAGGAATCGCTGTCTGAGCTACGCGAGGCC GAGACGCGTCCAAAAGGCGACGACGGCCTGACCGAGAAGCTGGAAAACGAGGTTGCCTCTTTGCAACGCCAAAAT GCACAGCTTCAACAACAAGCCTCCCGCGGTCATCACCGTCTCTCCGTCTCCTCTCCCCTCCAAGCCGAGCTCGAC TCCAAGACGGCCACCATCGAATCCATGGAGATTGAAATCTCTCGCCTCAAAGCTAGAGTGGAGCGCCAGGAGACT GGAGCCTCTTCGGAACGGGAGCAGGTCACCGCCCTCGAGGAAAAGCTCGCCCGGGCAGAAGCGGCGGCCGGCAAA GCTCAACGCGAACTCCAAGACGCCAAGCGCAACCTCGAGCGGGCGACGGAAAAGGCCGTCCGAGAAGGCGGGGAG CGCTCGAGCGCAGAGACCAAGGCCAAGACGCTGGAGAGCGAGCTGGCCGACGTCAAGGCCGCCAAAGACGAGGCC CATCTGAGAATCGAAGCCATGGAGAAAAAGGTGGCCACGCTGACGACGCTGCACAGGGAGCAGGACTCGAGGTCC CAGGCGCTGCGGAAAGACAAGGAGCGGGCGGAAAAGGAGCTCAGCGATTTACGGGCCAAGATGGAGAAGCTCGAG AGCGACAATCTCAGGCTGCGCAGTCGCAAGTCGGTCGAGGGCGGCGGCGGACTCGACGACGAGGGCGTCGACGAG CTGGAGGATGAAGAGCGTCTCAAGCTGGAAAAGAAGATTCGCAGTCTGGAGCGAGAGGTTCACGAGCTGCGCAGC GGCGTCTGGATCGAGAAGCGGCGCGAGATGGAAACGGGCTCCTTTCAGGATGTTGATCTCGGTTCAGCGCAGCCG AAAAAGGCGGGCTTTGGCGAGTTGATTGCCAGCGGTTTCAACGCCTTGGCGGGAGGTGGCGAGGACGATCTGATG GATGACGACTTTGACGAGGATGCCTTTAGAAAGGCTCAGCAGGAGGAGGGGCGCAAGAGGCTCGAGAGGATCAAG GAGAACGTCACCATGTCCGACCAAGACCCATCTCTCGAGTCCAAGACAGAATCTCACTCAGACTCTTCGTCTCTC GACAAGTTACTGAAAGAAGTTCGTGTGTTCCACAACTTGAATCGATGCAGGCCGGCCAGCCTTGCCGCTGCATCC GACTTTCTCGCTGCGAGCCACAACCACTCTCCATATACAGAGGACCTCTTGCCGATGGATGAAGCGAACGAGAGG ATAGAGCTCGCCATCAAGGCGGAAACAGCGATAAAAGAATTTCACCCCGATTTCGAATTCACAAGCATCCACGCC GCGATTGTGTTCAACGCTCCTCTCAACAATTTGAGAACATACGTGACAGAGCCCGGCGCAGGTTTGACGCTCAGA CGAGCCTTCCGAAGCATGGACCAACTTTTACAGAGCTTCACAAGCCGTGGAAGCCATCAGTCGGCCGCAAAACGA GCGGCATCGGACGAGTTGGCGGGCGGTAGCAAACAAAGCCAAGGAAACGAGCAAGAGAAGTCGAAACCCCGCTCC AGGGCCGAGAGCAAGAAGTCGAAAGATCGCGATCAACAAAACTGTGTCATCACTGGACACGCTGATCCAGAGGCG TGCCACATTATTCCATTTACATGGATTAACACCAAAGAGAAGCAGGAGCGAAATGGCTACCTCCTAGAACCGGCT TCGGCCATTTTACTACCTGAAGACGACGTACGGATCGCAACCCGTCTCGTCTATGGGACGGTCGGTGCGACGGAT AAAGCGTGGAACATGATTTCGCTAAACCCAACTCTTCACCAGAGTTGGGGGAGATATGCCTTTGGGCTCAAATGG ATCGGCCAGGAGGACTTGGGAAATGGGTTTTCGAAAGCGACAATTCAATTTCACTGGCTCCCAGCTCCTGAGAAG TTGAACTCTACATCAAGAATCAATGTCCAAGAGCTGCGAAGCGACTGGCTTGACAAGGTCAAAAGTCGACAAGCT AATGTCGCTTGCCATCACCTCTCGTCGAACCAGCCGGTCTTGTCGGGAGACACTTTCGCCCTGGAGCTTCCAACT GCCCATGTCGGCAACTTTGAAATTGTCATCAAGGTGCAATGGGCCCTTGTCAAGATCGGAGCTATGGCAGGAGCC GCCAACGATCCGAGATTTCACTGGCAGCACGATGGCCCGGATCGGATCGAGAACTGGATCCGAAATGTTGAGAAC GCAGGGAGTGAAGCAGTCTCAGAGATGATGCTTGATTGA |
Transcript | >Ophun1|3370 ATGGCCGACGCAGAGGAAAAGGCCCGTCAGGAAAAGATTGCCGCGGCGAGGAAGCGTGTCGAGGAGATGAAGAAG AAGCGAGGCATCAAGAGCGGGAGCGACAAGAAGGAGGGCACCAAGGAGGGCACGAAAGATGACACCGAAGAGTCC ACCAAAGACTCTGCAAAAGAGCCCGCCGACGAAAACGACTCGGCTTCCGCAGAGCCCGCAGACCCCCCCTCCATC GCCCAGCAGTCCAAACTCCGCTCCAGCTCCTTTCGCGCCGGCTCCCTCCCCGTCTCTCCCGCCCCCTTCAGCCCC GACGGAGACACCGCCCCCGACATCTACCGCAAGCACGTCGCCCGCATCGAAGAGCTCGAAAAGGAGAATAAGCGC CTCGCCAAAGAGGCCGCCGACTCCGAACGCCGCTGGAACAAGGCCGAGGAATCGCTGTCTGAGCTACGCGAGGCC GAGACGCGTCCAAAAGGCGACGACGGCCTGACCGAGAAGCTGGAAAACGAGGTTGCCTCTTTGCAACGCCAAAAT GCACAGCTTCAACAACAAGCCTCCCGCGGTCATCACCGTCTCTCCGTCTCCTCTCCCCTCCAAGCCGAGCTCGAC TCCAAGACGGCCACCATCGAATCCATGGAGATTGAAATCTCTCGCCTCAAAGCTAGAGTGGAGCGCCAGGAGACT GGAGCCTCTTCGGAACGGGAGCAGGTCACCGCCCTCGAGGAAAAGCTCGCCCGGGCAGAAGCGGCGGCCGGCAAA GCTCAACGCGAACTCCAAGACGCCAAGCGCAACCTCGAGCGGGCGACGGAAAAGGCCGTCCGAGAAGGCGGGGAG CGCTCGAGCGCAGAGACCAAGGCCAAGACGCTGGAGAGCGAGCTGGCCGACGTCAAGGCCGCCAAAGACGAGGCC CATCTGAGAATCGAAGCCATGGAGAAAAAGGTGGCCACGCTGACGACGCTGCACAGGGAGCAGGACTCGAGGTCC CAGGCGCTGCGGAAAGACAAGGAGCGGGCGGAAAAGGAGCTCAGCGATTTACGGGCCAAGATGGAGAAGCTCGAG AGCGACAATCTCAGGCTGCGCAGTCGCAAGTCGGTCGAGGGCGGCGGCGGACTCGACGACGAGGGCGTCGACGAG CTGGAGGATGAAGAGCGTCTCAAGCTGGAAAAGAAGATTCGCAGTCTGGAGCGAGAGGTTCACGAGCTGCGCAGC GGCGTCTGGATCGAGAAGCGGCGCGAGATGGAAACGGGCTCCTTTCAGGATGTTGATCTCGGTTCAGCGCAGCCG AAAAAGGCGGGCTTTGGCGAGTTGATTGCCAGCGGTTTCAACGCCTTGGCGGGAGGTGGCGAGGACGATCTGATG GATGACGACTTTGACGAGGATGCCTTTAGAAAGGCTCAGCAGGAGGAGGGGCGCAAGAGGCTCGAGAGGATCAAG GAGAACGTCACCATGTCCGACCAAGACCCATCTCTCGAGTCCAAGACAGAATCTCACTCAGACTCTTCGTCTCTC GACAAGTTACTGAAAGAAGTTCGTGTGTTCCACAACTTGAATCGATGCAGGCCGGCCAGCCTTGCCGCTGCATCC GACTTTCTCGCTGCGAGCCACAACCACTCTCCATATACAGAGGACCTCTTGCCGATGGATGAAGCGAACGAGAGG ATAGAGCTCGCCATCAAGGCGGAAACAGCGATAAAAGAATTTCACCCCGATTTCGAATTCACAAGCATCCACGCC GCGATTGTGTTCAACGCTCCTCTCAACAATTTGAGAACATACGTGACAGAGCCCGGCGCAGGTTTGACGCTCAGA CGAGCCTTCCGAAGCATGGACCAACTTTTACAGAGCTTCACAAGCCGTGGAAGCCATCAGTCGGCCGCAAAACGA GCGGCATCGGACGAGTTGGCGGGCGGTAGCAAACAAAGCCAAGGAAACGAGCAAGAGAAGTCGAAACCCCGCTCC AGGGCCGAGAGCAAGAAGTCGAAAGATCGCGATCAACAAAACTGTGTCATCACTGGACACGCTGATCCAGAGGCG TGCCACATTATTCCATTTACATGGATTAACACCAAAGAGAAGCAGGAGCGAAATGGCTACCTCCTAGAACCGGCT TCGGCCATTTTACTACCTGAAGACGACGTACGGATCGCAACCCGTCTCGTCTATGGGACGGTCGGTGCGACGGAT AAAGCGTGGAACATGATTTCGCTAAACCCAACTCTTCACCAGAGTTGGGGGAGATATGCCTTTGGGCTCAAATGG ATCGGCCAGGAGGACTTGGGAAATGGGTTTTCGAAAGCGACAATTCAATTTCACTGGCTCCCAGCTCCTGAGAAG TTGAACTCTACATCAAGAATCAATGTCCAAGAGCTGCGAAGCGACTGGCTTGACAAGGTCAAAAGTCGACAAGCT AATGTCGCTTGCCATCACCTCTCGTCGAACCAGCCGGTCTTGTCGGGAGACACTTTCGCCCTGGAGCTTCCAACT GCCCATGTCGGCAACTTTGAAATTGTCATCAAGGTGCAATGGGCCCTTGTCAAGATCGGAGCTATGGCAGGAGCC GCCAACGATCCGAGATTTCACTGGCAGCACGATGGCCCGGATCGGATCGAGAACTGGATCCGAAATGTTGAGAAC GCAGGGAGTGAAGCAGTCTCAGAGATGATGCTTGATTGA |
Gene | >Ophun1|3370 ATGGCCGACGCAGAGGAAAAGGCCCGTCAGGAAAAGATTGCCGCGGCGAGGAAGCGTGTAGGTGCCTTGTCTGAA GTTTTGCACCCTGCTGACGAGTCAGGTCGAGGAGATGAAGAAGAAGCGAGGCATCAAGAGCGGGAGCGACAAGAA GGAGGGCACCAAGGAGGGCACGAAAGATGACACCGAAGAGTCCACCAAAGACTCTGCAAAAGAGCCCGCCGACGA AAACGACTCGGCTTCCGCAGAGCCCGCAGACCCCCCCTCCATCGCCCAGCAGTCCAAACTCCGCTCCAGCTCCTT TCGCGCCGGCTCCCTCCCCGTCTCTCCCGCCCCCTTCAGCCCCGACGGAGACACCGCCCCCGACATCTACCGCAA GCACGTCGCCCGCATCGAAGAGCTCGAAAAGGAGAATAAGCGCCTCGCCAAAGAGGCCGCCGACTCCGAACGCCG CTGGAACAAGGCCGAGGAATCGCTGTCTGAGCTACGCGAGGCCGAGACGCGTCCAAAAGGCGACGACGGCCTGAC CGAGAAGCTGGTAAGTCCTAGTTGTCTTCGTCACTGTATCCTCTGACATCCCAGGAAAACGAGGTTGCCTCTTTG CAACGCCAAAATGCACAGCTTCAACAACAAGCCTCCCGCGGTCATCACCGTCTCTCCGTCTCCTCTCCCCTCCAA GCCGAGCTCGACTCCAAGACGGCCACCATCGAATCCATGGAGATTGAAATCTCTCGCCTCAAAGCTAGAGTGGAG CGCCAGGAGACTGGAGCCTCTTCGGAACGGGAGCAGGTCACCGCCCTCGAGGAAAAGCTCGCCCGGGCAGAAGCG GCGGCCGGCAAAGCTCAACGCGAACTCCAAGACGCCAAGCGCAACCTCGAGCGGGCGACGGAAAAGGCCGTCCGA GAAGGCGGGGAGCGCTCGAGCGCAGAGACCAAGGCCAAGACGCTGGAGAGCGAGCTGGCCGACGTCAAGGCCGCC AAAGACGAGGCCCATCTGAGAATCGAAGCCATGGAGAAAAAGGTGGCCACGCTGACGACGCTGCACAGGGAGCAG GACTCGAGGTCCCAGGCGCTGCGGAAAGACAAGGAGCGGGCGGAAAAGGAGCTCAGCGATTTACGGGCCAAGATG GAGAAGCTCGAGAGCGACAATCTCAGGCTGCGCAGTCGCAAGTCGGTCGAGGGCGGCGGCGGACTCGACGACGAG GGCGTCGACGAGCTGGAGGATGAAGAGCGTCTCAAGCTGGAAAAGAAGATTCGCAGTCTGGAGCGAGAGGTTCAC GAGCTGCGCAGCGGCGTCTGGATCGAGAAGCGGCGCGAGATGGAAACGGGCTCCTTTCAGGATGTTGATCTCGGT TCAGCGCAGCCGAAAAAGGCGGGCTTTGGCGAGTTGATTGCCAGCGGTTTCAACGCCTTGGCGGGAGGTGGCGAG GACGATCTGATGGATGACGACTTTGACGAGGATGCCTTTAGAAAGGCTCAGCAGGAGGAGGGGCGCAAGAGGCTC GAGAGGATCAAGGAGGTTAAGCGGTCGTTGAAGCATTGGGAGGGGTGGAGGTTGGATCTTGTTGATTTGAGGAGG GGAGGCGAGGGGGGGGATATATTTGATGTGTAGGGGTAGGGGGGTGAGTATAAGGGTGAAGAAGAACTGGAAGAT GGGCGTTTAAGAGACATTGAGACGGCTGTTGTGATGCTGTGAAGATGGCTACAAAGATGGACCGTGAGACGAGCC TGTGGATATGACAACTAAAGATAAGAATAACGTTTGGCACTGGCAAACTTACCAGGAGATGGACGTAGGCATCTG TCACAGTTCCGCTAGGCCATTGGCAAAAGGGAGGACTCCCGACCTAAGACGAAAGTATCACGGGCTATATTCAAC AGCATCATTGATGTTGCAAGCTTTGATGCTGCAGGTGGCGATTTGACGGGCTATAAGTCTACTACAATCTCTACA TATTCGCAACGCCGCTCGCTCGCTGCTGCTCGTAACTACCATCGCCTCCCTCGAAATCAGACTCTTCTCTAACCA CCTTTCGACATCTCTTCCAGGCAGTAAACACACGGTGTTTTCTTGATAGATGTACTGTGTCAAGGGTTATCTGCA GCTGGTGACTAAGGGCTGCCCGATTGTTTACAAGAACCCATGCAGGTGCCAACAAACACACACACACACACACAC ACACACACAAAGTCATCATAATCCTCATGTTGCTAAGCTACCCTAACGAGTGCGAAAATATATAATAGAGTAACT CTACTCCTAGCTTGAGAAGAAGACGAAGGGGACGAGAGGTCGAAGAGGACAAAAGGGACGACGAGGACAAGAGGA CGAAGAGTACGAAGAGGACAAAAGGGACGAAGGGGACGAAGGGGACGAAAGGGACGAAGGAGCCCGCACACAACA CGCCTTCTTTCCTGCCAGAACGTCACCATGTCCGACCAAGACCCATCTCTCGAGTCCAAGACAGAATCTCACTCA GACTCTTCGTCTCTCGACAAGTTACTGAAAGAAGTTCGTGTGTTCCACAACTTGAATCGATGCAGGCCGGCCAGC CTTGCCGCTGCATCCGACTTTCTCGCTGCGAGCCACAACCACTCTCCATATACAGAGGACCTCTTGCCGATGGAT GAAGCGAACGAGAGGATAGAGCTCGCCATCAAGGCGGAAACAGCGATAAAAGAATTTCACCCCGATTTCGAATTC ACAAGCATCCACGCCGCGATTGTGTTCAACGCTCCTCTCAACAATTTGAGAACATACGTGACAGAGCCCGGCGCA GGTTTGACGCTCAGACGAGCCTTCCGAAGCATGGACCAACTTTTACAGAGCTGTGAGTTTGCTGTCGACGAAACC TTCCCACATCCAGATGCTAACGAAAATTTATCTAGTCACAAGCCGTGGAAGCCATCAGTCGGCCGCAAAACGAGC GGCATCGGACGAGTTGGCGGGCGGTAGCAAACAAAGCCAAGGAAACGAGCAAGAGAAGTCGAAACCCCGCTCCAG GGCCGAGAGCAAGAAGTCGAAAGATCGCGATCAACAAAACTGTGTCATCACTGGACACGCTGATCCAGAGGCGTG CCACATTATTCCATTTACATGGATTAACACCAAAGAGAAGCAGGAGCGAAATGGCTACCTCCTAGAACCGGCTTC GGCCATTTTACTACCTGAAGACGACGTACGGATCGCAACCCGTCTCGTCTATGGGACGGTCGGTGCGACGGATAA AGCGTGGAACATGATTTCGCTAAACCCAACTCTTCACCAGAGTTGGGGGAGATATGCCTTTGGGCTCAAATGGAT CGGCCAGGAGGACTTGGGAAATGGGTTTTCGAAAGCGACAATTCAATTTCACTGGCTCCCAGCTCCTGAGAAGTT GAACTCTACATCAAGAATCAATGTCCAAGAGCTGCGAAGCGACTGGCTTGACAAGGTCAAAAGTCGACAAGCTAA TGTCGCTTGCCATCACCTCTCGTCGAACCAGCCGGTCTTGTCGGGAGACACTTTCGCCCTGGAGCTTCCAACTGC CCATGTCGGCAACTTTGAAATTGTCATCAAGGTGCAATGGGCCCTTGTCAAGATCGGAGCTATGGCAGGAGCCGC CAACGATCCGAGATTTCACTGGCAGCACGATGGCCCGGATCGGATCGAGAACTGGATCCGAAATGTTGAGAACGC AGGGAGTGAAGCAGTCTCAGAGATGATGCTTGATTGA |