Protein ID | Ophun1|3335 |
Gene name | |
Location | Contig_299:6426..8296 |
Strand | + |
Gene length (bp) | 1870 |
Transcript length (bp) | 1761 |
Coding sequence length (bp) | 1761 |
Protein length (aa) | 587 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01564 | Spermine_synth | Spermine/spermidine synthase domain | 5.0E-06 | 344 | 450 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q8D3Q3|SPEE_VIBVU | Polyamine aminopropyltransferase OS=Vibrio vulnificus (strain CMCP6) GN=speE PE=3 SV=1 | 337 | 451 | 8.0E-09 |
sp|Q7MF74|SPEE_VIBVY | Polyamine aminopropyltransferase OS=Vibrio vulnificus (strain YJ016) GN=speE PE=3 SV=1 | 337 | 451 | 9.0E-09 |
sp|Q6NTR1|MET13_XENLA | Methyltransferase-like protein 13 OS=Xenopus laevis GN=mettl13 PE=2 SV=1 | 340 | 538 | 4.0E-08 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 51 | 73 | 22 |
2 | 88 | 110 | 22 |
3 | 117 | 139 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 4251 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|3335 MPAKSASKVPAKPSTPAPAGGFTPERFEAELKGLAAKARDDSSGKRVVEQLFLFAKAALLLALLGVYSFVSPLYL SPVYGSLPASLWHSRLLMVGCFIGWAGNVAFRNLLPVRTTKLLPLVAVYIPTVQWFLVGYSSLLGPRWGPLFTEG VTLMPLAVLTAASVADLFEDARLPLLPGFIAEAAPGIGSWAWLKFVELQASRHLLPNMGRLIPLTRLGLELMLGA VYAVLDRSKLLLYVLPPLMHTMVFNTHLSSPAATSRLVSSMLSDDWLLLERRESLTGYVSVVQSLDRGFRAMRCD HSILGGDWINERGRALSEPIYGVFVMLEAVRLAERDDPPPDKEARALVVGLGVGTTPSTLVTHGINTTVVEIDPV VHEFAVKYFNLKENNPPILEDAVSYTSSLTETAPQSYDYIIHDVFTGGAEPVQLFTLEFLQSLERLLKPNGVIAI NYAGDLALPPPAIIMRTIKRVFPTCRVFREVPPDAKAIELDGADFANMAIFCTKSSSPLKFRSPTPADHLESETR KMFLTLDNEMLESEILSRHEDDTTVLLRNDTSAVEKWHEQGALGHWAIMRRMLPASVWERW* |
Coding | >Ophun1|3335 ATGCCGGCCAAAAGTGCGAGCAAGGTGCCGGCTAAGCCGTCGACTCCGGCTCCGGCTGGCGGCTTCACTCCCGAA CGCTTCGAAGCTGAGCTCAAAGGCCTCGCCGCCAAAGCCAGGGACGATTCTTCGGGCAAACGCGTCGTCGAGCAG CTGTTTCTTTTCGCAAAGGCAGCTCTCCTGCTGGCCCTCCTTGGCGTCTACTCCTTCGTCTCGCCCCTATACCTG TCGCCCGTCTACGGATCGCTGCCGGCCTCGCTATGGCATTCTCGCCTTCTCATGGTTGGCTGCTTCATCGGATGG GCGGGAAACGTGGCCTTTCGAAACCTGCTCCCCGTCAGGACGACGAAACTACTTCCGCTCGTCGCTGTTTACATT CCGACCGTGCAATGGTTTCTCGTCGGCTATAGCAGTCTTCTTGGTCCCCGGTGGGGTCCCCTCTTCACCGAGGGC GTTACCTTGATGCCCCTTGCTGTCTTGACTGCCGCTTCCGTCGCCGATCTCTTCGAGGATGCGCGACTACCTCTA CTGCCGGGATTCATCGCCGAGGCCGCTCCGGGTATCGGTTCATGGGCTTGGCTCAAGTTTGTCGAGCTGCAGGCC AGCCGCCATCTGCTGCCCAACATGGGCCGTCTCATACCTCTCACCCGTCTCGGCTTGGAACTGATGTTGGGCGCC GTGTATGCCGTCTTGGACCGCTCCAAGCTTCTGCTGTATGTGCTGCCTCCGCTGATGCACACCATGGTTTTCAAC ACACACCTCTCCTCGCCGGCCGCCACCTCACGGCTCGTCAGCTCCATGCTGTCAGACGACTGGCTGCTGCTGGAG CGCCGAGAGTCCCTGACGGGGTACGTTTCCGTTGTGCAGAGCTTAGACCGAGGCTTCCGCGCCATGCGCTGCGAC CACAGCATCCTGGGCGGCGACTGGATCAACGAGCGTGGTCGCGCGCTGTCGGAGCCCATCTACGGCGTCTTTGTC ATGCTTGAGGCTGTGCGACTAGCAGAGAGGGACGACCCACCGCCGGATAAGGAGGCACGCGCTCTGGTTGTCGGG CTCGGCGTGGGTACGACGCCTTCGACTCTCGTCACCCACGGCATCAATACGACAGTCGTCGAGATCGACCCGGTC GTGCACGAGTTTGCCGTCAAGTACTTTAATCTCAAGGAGAACAACCCTCCCATCTTGGAGGATGCCGTGAGCTAC ACCTCGTCTCTAACGGAAACCGCCCCCCAAAGTTACGACTACATCATTCACGACGTCTTCACCGGCGGCGCCGAA CCTGTGCAGTTGTTCACCCTAGAGTTTCTTCAGAGCTTGGAGAGGTTGCTGAAGCCAAATGGAGTCATTGCCATT AACTACGCCGGCGACCTCGCTTTACCCCCTCCTGCCATCATCATGCGCACCATCAAGCGTGTCTTCCCGACATGT CGCGTCTTCCGCGAGGTGCCCCCTGACGCAAAGGCCATTGAGCTCGACGGAGCCGACTTTGCCAACATGGCCATC TTTTGCACAAAGTCTAGCTCTCCGCTGAAGTTTAGGAGCCCTACGCCGGCCGACCATCTGGAGAGCGAGACGAGG AAAATGTTTCTCACCTTGGATAACGAGATGCTCGAGTCTGAGATTCTGTCACGGCATGAAGACGATACGACTGTC TTGCTGAGGAACGATACTAGCGCGGTGGAGAAGTGGCATGAGCAGGGCGCGCTGGGTCACTGGGCTATAATGCGG AGGATGCTGCCGGCTTCTGTGTGGGAGCGGTGGTGA |
Transcript | >Ophun1|3335 ATGCCGGCCAAAAGTGCGAGCAAGGTGCCGGCTAAGCCGTCGACTCCGGCTCCGGCTGGCGGCTTCACTCCCGAA CGCTTCGAAGCTGAGCTCAAAGGCCTCGCCGCCAAAGCCAGGGACGATTCTTCGGGCAAACGCGTCGTCGAGCAG CTGTTTCTTTTCGCAAAGGCAGCTCTCCTGCTGGCCCTCCTTGGCGTCTACTCCTTCGTCTCGCCCCTATACCTG TCGCCCGTCTACGGATCGCTGCCGGCCTCGCTATGGCATTCTCGCCTTCTCATGGTTGGCTGCTTCATCGGATGG GCGGGAAACGTGGCCTTTCGAAACCTGCTCCCCGTCAGGACGACGAAACTACTTCCGCTCGTCGCTGTTTACATT CCGACCGTGCAATGGTTTCTCGTCGGCTATAGCAGTCTTCTTGGTCCCCGGTGGGGTCCCCTCTTCACCGAGGGC GTTACCTTGATGCCCCTTGCTGTCTTGACTGCCGCTTCCGTCGCCGATCTCTTCGAGGATGCGCGACTACCTCTA CTGCCGGGATTCATCGCCGAGGCCGCTCCGGGTATCGGTTCATGGGCTTGGCTCAAGTTTGTCGAGCTGCAGGCC AGCCGCCATCTGCTGCCCAACATGGGCCGTCTCATACCTCTCACCCGTCTCGGCTTGGAACTGATGTTGGGCGCC GTGTATGCCGTCTTGGACCGCTCCAAGCTTCTGCTGTATGTGCTGCCTCCGCTGATGCACACCATGGTTTTCAAC ACACACCTCTCCTCGCCGGCCGCCACCTCACGGCTCGTCAGCTCCATGCTGTCAGACGACTGGCTGCTGCTGGAG CGCCGAGAGTCCCTGACGGGGTACGTTTCCGTTGTGCAGAGCTTAGACCGAGGCTTCCGCGCCATGCGCTGCGAC CACAGCATCCTGGGCGGCGACTGGATCAACGAGCGTGGTCGCGCGCTGTCGGAGCCCATCTACGGCGTCTTTGTC ATGCTTGAGGCTGTGCGACTAGCAGAGAGGGACGACCCACCGCCGGATAAGGAGGCACGCGCTCTGGTTGTCGGG CTCGGCGTGGGTACGACGCCTTCGACTCTCGTCACCCACGGCATCAATACGACAGTCGTCGAGATCGACCCGGTC GTGCACGAGTTTGCCGTCAAGTACTTTAATCTCAAGGAGAACAACCCTCCCATCTTGGAGGATGCCGTGAGCTAC ACCTCGTCTCTAACGGAAACCGCCCCCCAAAGTTACGACTACATCATTCACGACGTCTTCACCGGCGGCGCCGAA CCTGTGCAGTTGTTCACCCTAGAGTTTCTTCAGAGCTTGGAGAGGTTGCTGAAGCCAAATGGAGTCATTGCCATT AACTACGCCGGCGACCTCGCTTTACCCCCTCCTGCCATCATCATGCGCACCATCAAGCGTGTCTTCCCGACATGT CGCGTCTTCCGCGAGGTGCCCCCTGACGCAAAGGCCATTGAGCTCGACGGAGCCGACTTTGCCAACATGGCCATC TTTTGCACAAAGTCTAGCTCTCCGCTGAAGTTTAGGAGCCCTACGCCGGCCGACCATCTGGAGAGCGAGACGAGG AAAATGTTTCTCACCTTGGATAACGAGATGCTCGAGTCTGAGATTCTGTCACGGCATGAAGACGATACGACTGTC TTGCTGAGGAACGATACTAGCGCGGTGGAGAAGTGGCATGAGCAGGGCGCGCTGGGTCACTGGGCTATAATGCGG AGGATGCTGCCGGCTTCTGTGTGGGAGCGGTGGTGA |
Gene | >Ophun1|3335 ATGCCGGCCAAAAGTGCGAGCAAGGTGCCGGCTAAGCCGTCGACTCCGGCTCCGGCTGGCGGCTTCACTCCCGAA CGCTTCGAAGCTGAGCTCAAAGGCCTCGCCGCCAAAGCCAGGGACGATTCTTCGGGCAAACGCGTCGTCGAGCAG CTGTTTCTTTTCGCAAAGGCAGCTCTCCTGCTGGCCCTCCTTGGCGTCTACTCCTTCGTCTCGCCCCTATACCTG TCGCCCGTCTACGGATCGCTGCCGGCCTCGCTATGGCATTCTCGCCTTCTCATGGTTGGCTGCTTCATCGGATGG GCGGGAAACGTGGCCTTTCGAAACCTGCTCCCCGTCAGGACGACGAAACTACTTCCGCTCGTCGCTGTTTACATT CCGACCGTGCAATGGTTTCTCGTCGGCTATAGCAGTCTTCTTGGTCCCCGGTGGGGTCCCCTCTTCACCGAGGGC GTTACCTTGATGCCCCTTGCTGTCTTGACTGCCGCTTCCGTCGCCGATCTCTTCGAGGATGCGCGACTACCTCTA CTGCCGGGATTCATCGCCGAGGCCGCTCCGGGTATCGGTTCATGGGCTTGGCTCAAGTTTGTCGAGCTGCAGGCC AGCCGCCATCTGCTGCCCAACATGGGCCGTCTCATACCTCTCACCCGTCTCGGCTTGGAACTGATGTTGGGCGCC GTGTATGCCGTCTTGGACCGCTCCAAGCTTCTGCTGTATGTGCTGCCTCCGCTGATGCACACCATGGTTTTCAAC ACACACCTCTCCTCGCCGGCCGCCACCTCACGGCTCGTCAGCTCCATGCTGTCAGACGACTGGCTGCTGCTGGAG CGCCGAGAGTCCCTGACGGGGTACGTTTCCGTTGTGCAGAGCTTAGACCGAGGCTTCCGCGCCATGCGCTGCGAC CACAGCATCCTGGGCGGCGACTGGATCAACGAGCGTGGTCGCGCGCTGTCGGAGCCCATCTACGGCGTCTTTGTC ATGCTTGAGGCTGTGCGACTAGCAGAGAGGGACGACCCACCGCCGGATAAGGAGGCACGCGCTCTGGTTGTGTAA GTTGCGGCTCTGACTCTTGTAAGCTGGCGTCGGTGCTGACGGGACACAGCGGGCTCGGCGTGGGTACGACGCCTT CGACTCTCGTCACCCACGGCATCAATACGACAGTCGTCGAGATCGACCCGGTCGTGCACGAGTTTGCCGTCAAGT ACTTTAATCTCAAGGAGAACAACCCTCCCATCTTGGAGGATGCCGTGAGCTACACCTCGTCTCTAACGGAAACCG CCCCCCAAAGTTACGACTACATCATTCACGACGTCTTCACCGGCGGCGCCGAACCTGTGCAGTTGTTCACCCTAG AGTTTCTTCAGAGCTTGGAGAGGTTGCTGAAGCCAAATGGAGTCATTGCCATTGTGAGTGGCCCGTCCGTGAGCG AACTCGGATATAGGAGTCTAACGCTTGTCTGCAGAACTACGCCGGCGACCTCGCTTTACCCCCTCCTGCCATCAT CATGCGCACCATCAAGCGTGTCTTCCCGACATGTCGCGTCTTCCGCGAGGTGCCCCCTGACGCAAAGGCCATTGA GCTCGACGGAGCCGACTTTGCCAACATGGCCATCTTTTGCACAAAGTCTAGCTCTCCGCTGAAGTTTAGGAGCCC TACGCCGGCCGACCATCTGGAGAGCGAGACGAGGAAAATGTTTCTCACCTTGGATAACGAGATGCTCGAGTCTGA GATTCTGTCACGGCATGAAGACGATACGACTGTCTTGCTGAGGAACGATACTAGCGCGGTGGAGAAGTGGCATGA GCAGGGCGCGCTGGGTCACTGGGCTATAATGCGGAGGATGCTGCCGGCTTCTGTGTGGGAGCGGTGGTGA |