Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3311
Gene name
LocationContig_295:18224..18643
Strand+
Gene length (bp)419
Transcript length (bp)351
Coding sequence length (bp)351
Protein length (aa) 117

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02970 TBCA Tubulin binding cofactor A 8.2E-25 2 102

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0048487 beta-tubulin binding Yes
GO:0007023 post-chaperonin tubulin folding pathway Yes
GO:0007021 tubulin complex assembly Yes
GO:0043933 protein-containing complex organization No
GO:0065003 protein-containing complex assembly No
GO:0008092 cytoskeletal protein binding No
GO:0003674 molecular_function No
GO:0016043 cellular component organization No
GO:0008150 biological_process No
GO:0071840 cellular component organization or biogenesis No
GO:0009987 cellular process No
GO:0005515 protein binding No
GO:0015631 tubulin binding No
GO:0005488 binding No
GO:0022607 cellular component assembly No
GO:0006457 protein folding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3656
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1067
Ophiocordyceps australis map64 (Brazil) OphauB2|3943
Ophiocordyceps camponoti-floridani Ophcf2|00318
Ophiocordyceps camponoti-rufipedis Ophun1|3311 (this protein)
Ophiocordyceps kimflemingae Ophio5|1332
Ophiocordyceps subramaniannii Hirsu2|7067

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3311
MPPPSPLAITTSSVQRLLKEEASYHTELAEQRARVDALEAKAGNEDEDGNAAFLLKQQRAVVEQTRAVFAPLRLR
IDEAVAKLEEQVAAEGEGQDGDLAGARAALEMAAKAKAERT*
Coding >Ophun1|3311
ATGCCGCCCCCCTCCCCGCTGGCCATCACCACCAGCTCCGTCCAGCGCCTCCTCAAGGAAGAAGCCTCGTACCAC
ACCGAGCTGGCCGAGCAGCGAGCACGAGTCGACGCGCTCGAGGCCAAAGCCGGTAACGAGGATGAGGATGGCAAC
GCGGCCTTTCTTCTCAAGCAGCAGCGGGCGGTGGTTGAGCAGACGAGGGCTGTTTTCGCGCCGTTGAGACTTCGG
ATTGATGAGGCTGTTGCGAAGTTGGAGGAGCAGGTTGCTGCGGAGGGGGAGGGTCAGGATGGGGATCTTGCTGGT
GCGAGGGCTGCGTTGGAGATGGCGGCCAAGGCCAAGGCGGAGAGGACTTGA
Transcript >Ophun1|3311
ATGCCGCCCCCCTCCCCGCTGGCCATCACCACCAGCTCCGTCCAGCGCCTCCTCAAGGAAGAAGCCTCGTACCAC
ACCGAGCTGGCCGAGCAGCGAGCACGAGTCGACGCGCTCGAGGCCAAAGCCGGTAACGAGGATGAGGATGGCAAC
GCGGCCTTTCTTCTCAAGCAGCAGCGGGCGGTGGTTGAGCAGACGAGGGCTGTTTTCGCGCCGTTGAGACTTCGG
ATTGATGAGGCTGTTGCGAAGTTGGAGGAGCAGGTTGCTGCGGAGGGGGAGGGTCAGGATGGGGATCTTGCTGGT
GCGAGGGCTGCGTTGGAGATGGCGGCCAAGGCCAAGGCGGAGAGGACTTGA
Gene >Ophun1|3311
ATGCCGCCCCCCTCCCCGCTGGCCATCACCACCAGCTCCGTCCAGCGCCTCCTCAAGGAAGAAGCCTCGTACCAC
ACCGAGCTGGCCGAGCAGCGAGCACGAGTCGACGCGCTCGAGGCCAAAGCCGGTAACGAGGATGAGGATGGCAAC
GCGGCCTTTCTTCTCAAGCAGCAGGTACGGCCGCTTCGCCCCCCTCGGGATGTCTGAGTCGAGGATCTGGGGGCT
GATGTGGTGTTGATTAGCGGGCGGTGGTTGAGCAGACGAGGGCTGTTTTCGCGCCGTTGAGACTTCGGATTGATG
AGGCTGTTGCGAAGTTGGAGGAGCAGGTTGCTGCGGAGGGGGAGGGTCAGGATGGGGATCTTGCTGGTGCGAGGG
CTGCGTTGGAGATGGCGGCCAAGGCCAAGGCGGAGAGGACTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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