Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3300
Gene name
LocationContig_294:7914..8736
Strand+
Gene length (bp)822
Transcript length (bp)666
Coding sequence length (bp)666
Protein length (aa) 222

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 96 115 19
2 120 139 19
3 152 171 19
4 186 208 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3300
MRALRRRIKTGDGGIDWNSVDETIGKELVSQRLHDPVPTWYEVPIKVRTERYIHFTSSMELGRSADQLIGLLKND
LESIASTTTDRGRVEPRAPKLLLVLVDFAIFAYVCYSFWTQPVTFSTVVAYSTVVIIKQTMLALKRYQTVKGARR
LFTHMVSINILGILLVSTPVTVDRKVLAKDGNMVALTLAMVFATLFLAEPIAPALLTVTERGVAASSRVLM*
Coding >Ophun1|3300
ATGCGAGCTCTGCGGCGGCGGATCAAGACGGGAGACGGAGGCATCGACTGGAACAGCGTTGACGAGACAATCGGA
AAAGAGCTCGTCTCTCAGAGGCTTCACGATCCGGTGCCAACCTGGTACGAGGTCCCCATCAAAGTGCGGACAGAG
CGCTATATACACTTCACCAGCAGCATGGAGCTCGGCCGCTCGGCTGATCAGCTCATCGGCCTGCTAAAGAACGAC
CTAGAGAGCATCGCGTCGACGACCACCGACCGAGGACGCGTCGAGCCTCGAGCGCCCAAGTTGCTCCTCGTCTTG
GTCGACTTCGCTATTTTCGCCTACGTCTGCTACTCCTTCTGGACACAGCCCGTTACCTTCAGCACCGTCGTAGCC
TACAGCACCGTCGTCATCATCAAGCAGACGATGCTGGCACTCAAGCGTTACCAGACGGTCAAGGGCGCACGCCGG
CTCTTCACACACATGGTCTCTATCAACATCCTCGGCATACTGCTGGTGTCGACGCCCGTGACGGTGGATCGGAAG
GTGTTGGCCAAGGACGGGAATATGGTGGCTTTGACGCTGGCTATGGTCTTTGCTACCTTGTTTCTGGCTGAGCCT
ATTGCTCCGGCTTTGCTGACGGTGACGGAGAGGGGTGTTGCTGCGTCGTCGAGAGTGTTGATGTGA
Transcript >Ophun1|3300
ATGCGAGCTCTGCGGCGGCGGATCAAGACGGGAGACGGAGGCATCGACTGGAACAGCGTTGACGAGACAATCGGA
AAAGAGCTCGTCTCTCAGAGGCTTCACGATCCGGTGCCAACCTGGTACGAGGTCCCCATCAAAGTGCGGACAGAG
CGCTATATACACTTCACCAGCAGCATGGAGCTCGGCCGCTCGGCTGATCAGCTCATCGGCCTGCTAAAGAACGAC
CTAGAGAGCATCGCGTCGACGACCACCGACCGAGGACGCGTCGAGCCTCGAGCGCCCAAGTTGCTCCTCGTCTTG
GTCGACTTCGCTATTTTCGCCTACGTCTGCTACTCCTTCTGGACACAGCCCGTTACCTTCAGCACCGTCGTAGCC
TACAGCACCGTCGTCATCATCAAGCAGACGATGCTGGCACTCAAGCGTTACCAGACGGTCAAGGGCGCACGCCGG
CTCTTCACACACATGGTCTCTATCAACATCCTCGGCATACTGCTGGTGTCGACGCCCGTGACGGTGGATCGGAAG
GTGTTGGCCAAGGACGGGAATATGGTGGCTTTGACGCTGGCTATGGTCTTTGCTACCTTGTTTCTGGCTGAGCCT
ATTGCTCCGGCTTTGCTGACGGTGACGGAGAGGGGTGTTGCTGCGTCGTCGAGAGTGTTGATGTGA
Gene >Ophun1|3300
ATGCGAGCTCTGCGGCGGCGGATCAAGACGGGAGACGGAGGCATCGACTGGAACAGCGTTGACGAGACAATCGGA
AAAGAGCTCGTCTCTCAGAGGCTTCACGATCCGGTGCCAACCTGGTACGAGGTCCCCATCAAAGTGCGGACAGAG
CGCTATATACACTTCACCAGCAGCATGGAGCTCGGCCGCTCGGCTGATCAGCTCATCGGCCTGCTAAAGAACGAC
CTAGAGAGCATCGTCGAGACGCTCGAGGACTATAAATCGACAGCCTCTCAGGACCAATAGGCGTCGACGACCACC
GACCGAGGACGCGTCGAGCCTCGAGCGCCCAAGTTGCTCCTCGTCTTGGTCGACTTCGCTATTTTCGCCTACGTC
TGCTACTCCTTCTGGACACAGCCCGTTACCTTCAGCACCGTCGTAGCCTACAGCACCGTCGTCATCATCAAGCAG
ACGATGCTGGCACTCAAGCGTTACCAGACGGTCAAGGGCGCACGCCGGCTCTTCACACACATGGTCTCTATCAAC
ATCCTCGGCATACTGCTGGTGTCGACGCCCGTGACGGTGGATCGGAAGGTGTTGGCCAAGGACGGGAATATGGTG
GCTTTGACGCTGGCTATGGTCTTTGCTACCTTGTTTCTGGCTGAGCCTATTGCTCCGGCTTTGCTGACGGTGACG
GAGAGGGGTGTTGCTGCGTCGTCGAGAGTGGTGGGTAGGATTCGGGGGCGAGGGAGGGGATGACGTTGAGGAGGG
GAGGGTTGCCTGAGGATGCTGCTAAGGGGTGGTTTCTGAACTGATGAACTCACCACTGGTTAGTTGATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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