Protein ID | Ophun1|3276 |
Gene name | |
Location | Contig_291:3928..4491 |
Strand | - |
Gene length (bp) | 563 |
Transcript length (bp) | 456 |
Coding sequence length (bp) | 456 |
Protein length (aa) | 152 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06094 | GGACT | Gamma-glutamyl cyclotransferase, AIG2-like | 3.8E-22 | 8 | 129 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9FIX2|AIG2L_ARATH | AIG2-like protein OS=Arabidopsis thaliana GN=At5g39720 PE=1 SV=1 | 5 | 135 | 5.0E-12 |
sp|P54121|AIG2_ARATH | Protein AIG2 OS=Arabidopsis thaliana GN=AIG2 PE=2 SV=1 | 2 | 139 | 3.0E-11 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 26 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|3276 MSGEHSAFFYGTLMAPEIFFSVCYGTRRPPQVICQLHTFRPAILNGHCRHRVRLADYPAVVRQEGQSVRGIYATG LTDANMDKLDRFEGDEYQRVEVDVEVREGTAGEAKKAFVYLFLKRDELELGEWDFEAFRREKMEVWTRQRWDEVE G* |
Coding | >Ophun1|3276 ATGAGCGGAGAACACTCAGCCTTCTTCTATGGAACCCTGATGGCTCCGGAAATCTTCTTTAGCGTTTGCTACGGG ACGAGGCGGCCGCCGCAAGTCATCTGCCAGCTGCACACCTTTAGGCCGGCGATACTGAATGGCCATTGTCGTCAC CGCGTCAGGCTGGCCGACTACCCCGCCGTCGTGCGGCAGGAGGGTCAGAGCGTCCGGGGCATCTATGCGACGGGT CTGACGGATGCCAATATGGACAAGCTGGATCGGTTCGAGGGCGATGAGTACCAACGCGTCGAGGTTGATGTTGAG GTTCGGGAGGGGACGGCTGGCGAGGCGAAGAAGGCGTTTGTATACCTATTCCTGAAGCGGGATGAGCTCGAACTG GGCGAGTGGGATTTCGAGGCCTTTCGTAGAGAGAAGATGGAGGTGTGGACGCGACAGCGGTGGGACGAGGTTGAA GGTTAG |
Transcript | >Ophun1|3276 ATGAGCGGAGAACACTCAGCCTTCTTCTATGGAACCCTGATGGCTCCGGAAATCTTCTTTAGCGTTTGCTACGGG ACGAGGCGGCCGCCGCAAGTCATCTGCCAGCTGCACACCTTTAGGCCGGCGATACTGAATGGCCATTGTCGTCAC CGCGTCAGGCTGGCCGACTACCCCGCCGTCGTGCGGCAGGAGGGTCAGAGCGTCCGGGGCATCTATGCGACGGGT CTGACGGATGCCAATATGGACAAGCTGGATCGGTTCGAGGGCGATGAGTACCAACGCGTCGAGGTTGATGTTGAG GTTCGGGAGGGGACGGCTGGCGAGGCGAAGAAGGCGTTTGTATACCTATTCCTGAAGCGGGATGAGCTCGAACTG GGCGAGTGGGATTTCGAGGCCTTTCGTAGAGAGAAGATGGAGGTGTGGACGCGACAGCGGTGGGACGAGGTTGAA GGTTAG |
Gene | >Ophun1|3276 ATGAGCGGAGAACACTCAGCCTTCTTCTATGGTCCGTGAGGCATCATGGCAGCTAGCAAATTGACGTCGCTGACT CGCGCAGGAACCCTGGTAAGCGGACACACGAGCTACCCAGAGCTTTCTCGGCCCTCTTGACTTTTCGGCAGATGG CTCCGGAAATCTTCTTTAGCGTTTGCTACGGGACGAGGCGGCCGCCGCAAGTCATCTGCCAGCTGCACACCTTTA GGCCGGCGATACTGAATGGCCATTGTCGTCACCGCGTCAGGCTGGCCGACTACCCCGCCGTCGTGCGGCAGGAGG GTCAGAGCGTCCGGGGCATCTATGCGACGGGTCTGACGGATGCCAATATGGACAAGCTGGATCGGTTCGAGGGCG ATGAGTACCAACGCGTCGAGGTTGATGTTGAGGTTCGGGAGGGGACGGCTGGCGAGGCGAAGAAGGCGTTTGTAT ACCTATTCCTGAAGCGGGATGAGCTCGAACTGGGCGAGTGGGATTTCGAGGCCTTTCGTAGAGAGAAGATGGAGG TGTGGACGCGACAGCGGTGGGACGAGGTTGAAGGTTAG |