Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|3260
Gene name
Location	Contig_29:42939..44027
Strand	-
Gene length (bp)	1088
Transcript length (bp)	1026
Coding sequence length (bp)	1026
Protein length (aa)	342

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF15916	DUF4743	Domain of unknown function (DUF4743)	1.2E-10	80	141
PF00293	NUDIX	NUDIX domain	3.7E-08	163	285

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P47173\|YJ9J_YEAST	Uncharacterized protein YJR142W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR142W PE=1 SV=1	47	324	2.0E-51
sp\|P41888\|TNR3_SCHPO	Thiamine pyrophosphokinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tnr3 PE=3 SV=1	89	324	1.0E-49
sp\|Q8VXZ0\|NUD20_ARATH	Nudix hydrolase 20, chloroplastic OS=Arabidopsis thaliana GN=NUDT20 PE=2 SV=1	114	302	8.0E-28
sp\|P0C026\|NUD24_ARATH	Nudix hydrolase 24, chloroplastic OS=Arabidopsis thaliana GN=NUDT24 PE=2 SV=1	89	317	1.0E-25

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 45	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|3260 MMSCSSAIDAADKFPYGIGKASTNTAAELSQLNLYALQWEDGEGRYSIGYMLDRVVEELLRVPVAIRGPVDLDRD SRSLILFQLPTEGERSRLVAGLASYWRENDTFKLLRRWRDENYPVYGRRSELLFSIERSAMGLFGTVQYGAHLTA YVDDSSAPHGIKMWVAKRSANKQTFPSMLDNTVAGGLVTGEEPFDCITREADEEASLPVNLVQRSVSCAGTVTYI YISEDAHVGYEGLIYPECQWVYDLPLPASVIPRPKDGEAEQFFLCDVDQIKTDIAEGKYKPNCALVVLDFFIRHG ILTEADEPDFNNLKRRLHRELPFPGPHSTDCLLTGTSSARR*
Coding	>Ophun1\|3260 ATGATGTCCTGTTCAAGCGCCATTGATGCTGCTGATAAATTCCCCTATGGGATAGGCAAGGCGAGCACGAATACA GCGGCAGAGCTCTCCCAGCTCAACCTTTACGCTCTTCAATGGGAAGATGGAGAGGGGCGATACTCGATCGGGTAC ATGCTTGACCGTGTTGTGGAAGAGCTTCTGCGTGTCCCAGTTGCTATCCGCGGCCCTGTAGACTTGGATCGGGAC AGTCGTTCCCTCATACTATTTCAACTTCCTACGGAAGGGGAGAGGAGCCGGCTTGTCGCGGGTCTGGCCAGTTAC TGGCGCGAAAACGACACCTTCAAGCTCCTCCGTCGCTGGCGAGATGAAAACTATCCAGTGTACGGGCGCAGGAGC GAGCTTTTGTTTAGCATCGAGCGGTCGGCAATGGGACTGTTCGGTACAGTACAGTATGGCGCGCATCTCACTGCA TACGTTGACGATAGTTCCGCTCCTCATGGCATCAAGATGTGGGTTGCCAAGCGCTCCGCAAACAAACAAACGTTT CCCAGCATGCTGGACAACACCGTCGCCGGAGGTCTTGTCACCGGTGAAGAACCATTCGATTGCATCACCCGCGAA GCAGACGAAGAGGCGAGCCTGCCTGTCAACTTGGTTCAGCGCTCTGTCAGCTGCGCGGGTACAGTGACATATATA TACATAAGCGAGGACGCTCATGTTGGATATGAAGGCCTGATTTACCCGGAATGTCAATGGGTGTATGATCTTCCC TTACCCGCCAGCGTGATTCCTCGGCCCAAGGACGGCGAGGCGGAGCAATTCTTTCTATGCGATGTGGATCAGATA AAAACCGACATTGCTGAAGGGAAGTATAAGCCCAATTGCGCCCTTGTTGTTCTTGACTTCTTTATTCGCCATGGC ATTTTGACCGAGGCCGACGAACCTGACTTCAACAACCTCAAACGCAGACTGCACCGCGAGCTGCCGTTCCCAGGC CCCCATAGCACAGACTGTCTTCTGACGGGGACATCATCGGCCCGTCGTTGA
Transcript	>Ophun1\|3260 ATGATGTCCTGTTCAAGCGCCATTGATGCTGCTGATAAATTCCCCTATGGGATAGGCAAGGCGAGCACGAATACA GCGGCAGAGCTCTCCCAGCTCAACCTTTACGCTCTTCAATGGGAAGATGGAGAGGGGCGATACTCGATCGGGTAC ATGCTTGACCGTGTTGTGGAAGAGCTTCTGCGTGTCCCAGTTGCTATCCGCGGCCCTGTAGACTTGGATCGGGAC AGTCGTTCCCTCATACTATTTCAACTTCCTACGGAAGGGGAGAGGAGCCGGCTTGTCGCGGGTCTGGCCAGTTAC TGGCGCGAAAACGACACCTTCAAGCTCCTCCGTCGCTGGCGAGATGAAAACTATCCAGTGTACGGGCGCAGGAGC GAGCTTTTGTTTAGCATCGAGCGGTCGGCAATGGGACTGTTCGGTACAGTACAGTATGGCGCGCATCTCACTGCA TACGTTGACGATAGTTCCGCTCCTCATGGCATCAAGATGTGGGTTGCCAAGCGCTCCGCAAACAAACAAACGTTT CCCAGCATGCTGGACAACACCGTCGCCGGAGGTCTTGTCACCGGTGAAGAACCATTCGATTGCATCACCCGCGAA GCAGACGAAGAGGCGAGCCTGCCTGTCAACTTGGTTCAGCGCTCTGTCAGCTGCGCGGGTACAGTGACATATATA TACATAAGCGAGGACGCTCATGTTGGATATGAAGGCCTGATTTACCCGGAATGTCAATGGGTGTATGATCTTCCC TTACCCGCCAGCGTGATTCCTCGGCCCAAGGACGGCGAGGCGGAGCAATTCTTTCTATGCGATGTGGATCAGATA AAAACCGACATTGCTGAAGGGAAGTATAAGCCCAATTGCGCCCTTGTTGTTCTTGACTTCTTTATTCGCCATGGC ATTTTGACCGAGGCCGACGAACCTGACTTCAACAACCTCAAACGCAGACTGCACCGCGAGCTGCCGTTCCCAGGC CCCCATAGCACAGACTGTCTTCTGACGGGGACATCATCGGCCCGTCGTTGA
Gene	>Ophun1\|3260 ATGATGTCCTGTTCAAGCGCCATTGATGCTGCTGATAAGTCCGTCGATCACCAATATTCGATTATAGCTCACGTG ACGCTTTTGCTGATGTCGCCAACAGATTCCCCTATGGGATAGGCAAGGCGAGCACGAATACAGCGGCAGAGCTCT CCCAGCTCAACCTTTACGCTCTTCAATGGGAAGATGGAGAGGGGCGATACTCGATCGGGTACATGCTTGACCGTG TTGTGGAAGAGCTTCTGCGTGTCCCAGTTGCTATCCGCGGCCCTGTAGACTTGGATCGGGACAGTCGTTCCCTCA TACTATTTCAACTTCCTACGGAAGGGGAGAGGAGCCGGCTTGTCGCGGGTCTGGCCAGTTACTGGCGCGAAAACG ACACCTTCAAGCTCCTCCGTCGCTGGCGAGATGAAAACTATCCAGTGTACGGGCGCAGGAGCGAGCTTTTGTTTA GCATCGAGCGGTCGGCAATGGGACTGTTCGGTACAGTACAGTATGGCGCGCATCTCACTGCATACGTTGACGATA GTTCCGCTCCTCATGGCATCAAGATGTGGGTTGCCAAGCGCTCCGCAAACAAACAAACGTTTCCCAGCATGCTGG ACAACACCGTCGCCGGAGGTCTTGTCACCGGTGAAGAACCATTCGATTGCATCACCCGCGAAGCAGACGAAGAGG CGAGCCTGCCTGTCAACTTGGTTCAGCGCTCTGTCAGCTGCGCGGGTACAGTGACATATATATACATAAGCGAGG ACGCTCATGTTGGATATGAAGGCCTGATTTACCCGGAATGTCAATGGGTGTATGATCTTCCCTTACCCGCCAGCG TGATTCCTCGGCCCAAGGACGGCGAGGCGGAGCAATTCTTTCTATGCGATGTGGATCAGATAAAAACCGACATTG CTGAAGGGAAGTATAAGCCCAATTGCGCCCTTGTTGTTCTTGACTTCTTTATTCGCCATGGCATTTTGACCGAGG CCGACGAACCTGACTTCAACAACCTCAAACGCAGACTGCACCGCGAGCTGCCGTTCCCAGGCCCCCATAGCACAG ACTGTCTTCTGACGGGGACATCATCGGCCCGTCGTTGA

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