Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3210
Gene name
LocationContig_286:528..3040
Strand+
Gene length (bp)2512
Transcript length (bp)1884
Coding sequence length (bp)1884
Protein length (aa) 628

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04146 YTH YT521-B-like domain 1.9E-67 398 597

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q0DA50|C3H45_ORYSJ Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica GN=Os06g0677700 PE=3 SV=1 398 461 6.0E-13
sp|A9LNK9|CPSF_ARATH 30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1 397 461 5.0E-12
sp|A9LNK9|CPSF_ARATH 30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1 537 596 1.0E-10
sp|Q5R746|YTDC2_PONAB YTH domain-containing protein 2 OS=Pongo abelii GN=YTHDC2 PE=2 SV=1 510 599 2.0E-10
sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2 PE=1 SV=1 510 599 5.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q0DA50|C3H45_ORYSJ Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica GN=Os06g0677700 PE=3 SV=1 398 461 6.0E-13
sp|A9LNK9|CPSF_ARATH 30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1 397 461 5.0E-12
sp|A9LNK9|CPSF_ARATH 30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1 537 596 1.0E-10
sp|Q5R746|YTDC2_PONAB YTH domain-containing protein 2 OS=Pongo abelii GN=YTHDC2 PE=2 SV=1 510 599 2.0E-10
sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2 PE=1 SV=1 510 599 5.0E-10
sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2 PE=1 SV=2 510 599 7.0E-10
sp|Q5R746|YTDC2_PONAB YTH domain-containing protein 2 OS=Pongo abelii GN=YTHDC2 PE=2 SV=1 398 461 8.0E-10
sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2 PE=1 SV=1 398 461 3.0E-09
sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2 PE=1 SV=2 398 461 4.0E-09
sp|Q96MU7|YTDC1_HUMAN YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3 395 460 2.0E-08
sp|Q9QY02|YTDC1_RAT YTH domain-containing protein 1 OS=Rattus norvegicus GN=Ythdc1 PE=1 SV=2 395 460 2.0E-08
sp|E9Q5K9|YTDC1_MOUSE YTH domain-containing protein 1 OS=Mus musculus GN=Ythdc1 PE=1 SV=2 395 460 2.0E-08
sp|Q4R5D9|YTHD2_MACFA YTH domain-containing family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1 391 469 3.0E-08
sp|Q9Y5A9|YTHD2_HUMAN YTH domain-containing family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2 391 469 3.0E-08
sp|Q0VCZ3|YTHD2_BOVIN YTH domain-containing family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1 391 469 3.0E-08
sp|Q91YT7|YTHD2_MOUSE YTH domain-containing family protein 2 OS=Mus musculus GN=Ythdf2 PE=1 SV=1 391 469 3.0E-08
sp|Q0DA50|C3H45_ORYSJ Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica GN=Os06g0677700 PE=3 SV=1 540 596 4.0E-08
sp|Q5RFL8|YTHD3_PONAB YTH domain-containing family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1 391 469 5.0E-08
sp|Q7Z739|YTHD3_HUMAN YTH domain-containing family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1 391 469 5.0E-08
sp|Q9BYJ9|YTHD1_HUMAN YTH domain-containing family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1 361 469 5.0E-08
sp|Q8BYK6|YTHD3_MOUSE YTH domain-containing family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2 391 469 6.0E-08
sp|P59326|YTHD1_MOUSE YTH domain-containing family protein 1 OS=Mus musculus GN=Ythdf1 PE=1 SV=1 391 469 9.0E-08
sp|E9Q5K9|YTDC1_MOUSE YTH domain-containing protein 1 OS=Mus musculus GN=Ythdc1 PE=1 SV=2 541 596 5.0E-07
sp|Q9QY02|YTDC1_RAT YTH domain-containing protein 1 OS=Rattus norvegicus GN=Ythdc1 PE=1 SV=2 541 596 5.0E-07
sp|Q96MU7|YTDC1_HUMAN YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3 541 596 5.0E-07
[Show less]

GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:0003674 molecular_function No
GO:0003676 nucleic acid binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup407
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7438
Ophiocordyceps australis map64 (Brazil) OphauB2|7806
Ophiocordyceps camponoti-floridani Ophcf2|07380
Ophiocordyceps camponoti-rufipedis Ophun1|3210 (this protein)
Ophiocordyceps kimflemingae Ophio5|5140
Ophiocordyceps subramaniannii Hirsu2|2237
Ophiocordyceps subramaniannii Hirsu2|7705
Ophiocordyceps subramaniannii Hirsu2|8182
Ophiocordyceps subramaniannii Hirsu2|8426

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3210
MALCFWRNHHWAVRGKLSMATVPGTAAPEPSQSLSSSGDAPVVGEAQQTPTAPAAQHEAPPGPPGPPQPPAVANY
AFSSQLDMASSQTSFGHQGPYDMASMAAALPGVAAYRPGHYPQGGQRYIPATSPPVVPPMPHMAPYGGPPPVAMS
QGYYVPQPQMPQYYAAGHMSPPQGPPAARQGLAYYPGQMMMNHPQSAFYYPQAGHYPGQPQHMPPGVVSGHFVAS
SPPNPDVRKARSAADSSSMPVQAHKPVQGHAIWIGNLPPQTDLMSLVHHVCKETAGLESLFLISKSNCAFANFKD
ENTCLAAQQKLHDSKFQSVRLVSRLRKNTVEGATGLTAPTGPAANSVNTAVQNEPSQDSPGLDNRSPGSDVRSPS
PPVSQPAKPKMNSGGDGNTQNDKFFILKSLTMEDLELSVRTGIWATQSHNEDSLNTAFKNFDNVYLIFSANKSGE
YFGYARMVSEINDDPAAAIEFAPKSQSTSSLDLPKAIPTDATEFAPKGRIIDDSARGTIFWEAEREDSESGSDNA
SEVSSNRSTGTEEETKTWGKPFKLEWLSISRLPFYRTRGLRNPWNSNREVKIARDGTELEPSVGRRLIGLFNRVQ
SPGPMPPAMRLPPTMMHGYVPIRGHGQ*
Coding >Ophun1|3210
ATGGCCCTCTGCTTCTGGCGCAATCATCATTGGGCGGTTCGGGGGAAGCTCTCGATGGCCACGGTCCCGGGAACA
GCGGCTCCTGAGCCCTCGCAGAGCCTGTCCAGCTCCGGAGACGCCCCCGTCGTCGGCGAGGCCCAGCAGACACCG
ACGGCCCCGGCCGCCCAGCATGAAGCGCCTCCAGGGCCTCCGGGGCCTCCGCAACCGCCGGCCGTTGCCAACTAT
GCCTTCTCCTCGCAGCTCGACATGGCCTCTTCGCAGACGTCGTTTGGCCATCAGGGGCCCTATGACATGGCTTCC
ATGGCCGCCGCCTTGCCCGGCGTTGCCGCCTATCGTCCGGGCCACTATCCCCAGGGAGGTCAGCGGTATATCCCG
GCCACGTCGCCGCCCGTCGTCCCGCCGATGCCACACATGGCTCCGTACGGAGGTCCGCCTCCGGTGGCCATGAGT
CAGGGTTATTACGTGCCCCAGCCTCAGATGCCGCAGTATTACGCTGCTGGCCACATGTCTCCGCCTCAGGGGCCC
CCGGCTGCCAGGCAAGGTCTCGCCTACTATCCGGGCCAGATGATGATGAACCATCCGCAGTCGGCCTTTTACTAT
CCGCAGGCCGGACACTATCCGGGGCAGCCGCAACACATGCCACCGGGCGTCGTCTCGGGACACTTTGTCGCCAGC
AGCCCGCCAAATCCTGATGTTCGGAAAGCTCGCTCCGCGGCAGACAGTTCTTCGATGCCTGTTCAGGCTCACAAG
CCGGTTCAAGGGCACGCCATCTGGATCGGCAATCTTCCTCCACAGACGGATCTGATGAGCCTCGTTCACCATGTT
TGCAAAGAGACGGCCGGGCTCGAGTCCCTGTTCCTGATATCAAAGAGCAACTGCGCCTTTGCGAATTTCAAAGAC
GAAAACACATGCTTGGCTGCGCAGCAAAAGCTGCACGACTCCAAGTTTCAGTCTGTTCGGCTTGTCAGTCGTCTG
CGGAAGAACACGGTTGAGGGGGCCACGGGTCTGACGGCGCCTACCGGTCCGGCTGCCAACTCCGTGAATACAGCA
GTCCAGAACGAGCCATCTCAAGATAGCCCCGGTCTGGACAACCGCAGCCCAGGCTCGGATGTTCGAAGCCCCAGT
CCGCCAGTCAGCCAGCCAGCCAAGCCCAAGATGAACTCTGGAGGCGACGGCAACACCCAGAATGACAAGTTCTTC
ATCCTCAAGAGCTTGACCATGGAGGATCTCGAGCTGAGCGTCCGGACCGGAATCTGGGCTACCCAGTCTCACAAT
GAAGACTCTCTCAACACTGCCTTCAAGAACTTTGACAATGTCTACCTGATCTTCTCGGCCAACAAGTCGGGCGAG
TATTTTGGATACGCCCGCATGGTATCCGAGATCAACGACGATCCAGCGGCGGCCATCGAGTTTGCCCCGAAGTCA
CAGTCCACGAGCAGCCTGGACTTGCCAAAGGCGATCCCGACTGACGCCACCGAATTCGCCCCCAAGGGCCGCATC
ATCGACGACTCTGCTCGTGGAACCATCTTCTGGGAGGCCGAGCGAGAGGATTCAGAGAGCGGATCGGACAATGCC
AGCGAGGTGTCGAGCAACAGGAGCACTGGCACCGAGGAGGAGACCAAAACATGGGGCAAGCCTTTCAAGCTCGAA
TGGCTGTCCATTAGCCGGCTTCCGTTCTACCGAACACGAGGCCTGCGAAACCCGTGGAACTCTAACAGAGAGGTC
AAGATCGCGAGAGACGGGACCGAGCTGGAGCCGTCAGTGGGCCGCAGACTGATTGGCCTGTTCAACCGCGTTCAG
AGCCCCGGGCCGATGCCGCCGGCGATGCGTCTGCCACCGACCATGATGCACGGCTACGTTCCCATCCGAGGGCAC
GGTCAATAG
Transcript >Ophun1|3210
ATGGCCCTCTGCTTCTGGCGCAATCATCATTGGGCGGTTCGGGGGAAGCTCTCGATGGCCACGGTCCCGGGAACA
GCGGCTCCTGAGCCCTCGCAGAGCCTGTCCAGCTCCGGAGACGCCCCCGTCGTCGGCGAGGCCCAGCAGACACCG
ACGGCCCCGGCCGCCCAGCATGAAGCGCCTCCAGGGCCTCCGGGGCCTCCGCAACCGCCGGCCGTTGCCAACTAT
GCCTTCTCCTCGCAGCTCGACATGGCCTCTTCGCAGACGTCGTTTGGCCATCAGGGGCCCTATGACATGGCTTCC
ATGGCCGCCGCCTTGCCCGGCGTTGCCGCCTATCGTCCGGGCCACTATCCCCAGGGAGGTCAGCGGTATATCCCG
GCCACGTCGCCGCCCGTCGTCCCGCCGATGCCACACATGGCTCCGTACGGAGGTCCGCCTCCGGTGGCCATGAGT
CAGGGTTATTACGTGCCCCAGCCTCAGATGCCGCAGTATTACGCTGCTGGCCACATGTCTCCGCCTCAGGGGCCC
CCGGCTGCCAGGCAAGGTCTCGCCTACTATCCGGGCCAGATGATGATGAACCATCCGCAGTCGGCCTTTTACTAT
CCGCAGGCCGGACACTATCCGGGGCAGCCGCAACACATGCCACCGGGCGTCGTCTCGGGACACTTTGTCGCCAGC
AGCCCGCCAAATCCTGATGTTCGGAAAGCTCGCTCCGCGGCAGACAGTTCTTCGATGCCTGTTCAGGCTCACAAG
CCGGTTCAAGGGCACGCCATCTGGATCGGCAATCTTCCTCCACAGACGGATCTGATGAGCCTCGTTCACCATGTT
TGCAAAGAGACGGCCGGGCTCGAGTCCCTGTTCCTGATATCAAAGAGCAACTGCGCCTTTGCGAATTTCAAAGAC
GAAAACACATGCTTGGCTGCGCAGCAAAAGCTGCACGACTCCAAGTTTCAGTCTGTTCGGCTTGTCAGTCGTCTG
CGGAAGAACACGGTTGAGGGGGCCACGGGTCTGACGGCGCCTACCGGTCCGGCTGCCAACTCCGTGAATACAGCA
GTCCAGAACGAGCCATCTCAAGATAGCCCCGGTCTGGACAACCGCAGCCCAGGCTCGGATGTTCGAAGCCCCAGT
CCGCCAGTCAGCCAGCCAGCCAAGCCCAAGATGAACTCTGGAGGCGACGGCAACACCCAGAATGACAAGTTCTTC
ATCCTCAAGAGCTTGACCATGGAGGATCTCGAGCTGAGCGTCCGGACCGGAATCTGGGCTACCCAGTCTCACAAT
GAAGACTCTCTCAACACTGCCTTCAAGAACTTTGACAATGTCTACCTGATCTTCTCGGCCAACAAGTCGGGCGAG
TATTTTGGATACGCCCGCATGGTATCCGAGATCAACGACGATCCAGCGGCGGCCATCGAGTTTGCCCCGAAGTCA
CAGTCCACGAGCAGCCTGGACTTGCCAAAGGCGATCCCGACTGACGCCACCGAATTCGCCCCCAAGGGCCGCATC
ATCGACGACTCTGCTCGTGGAACCATCTTCTGGGAGGCCGAGCGAGAGGATTCAGAGAGCGGATCGGACAATGCC
AGCGAGGTGTCGAGCAACAGGAGCACTGGCACCGAGGAGGAGACCAAAACATGGGGCAAGCCTTTCAAGCTCGAA
TGGCTGTCCATTAGCCGGCTTCCGTTCTACCGAACACGAGGCCTGCGAAACCCGTGGAACTCTAACAGAGAGGTC
AAGATCGCGAGAGACGGGACCGAGCTGGAGCCGTCAGTGGGCCGCAGACTGATTGGCCTGTTCAACCGCGTTCAG
AGCCCCGGGCCGATGCCGCCGGCGATGCGTCTGCCACCGACCATGATGCACGGCTACGTTCCCATCCGAGGGCAC
GGTCAATAG
Gene >Ophun1|3210
ATGGCCCTCTGCTTCTGGGTGAGCTATTCTCGATAGTCGCCGCCAGTCCGATCTCCCCTCATCTGCATGTAGGTA
CCTTGCTGCGTCTTGCTCTCACCCCCAGCCCCTTGGCAAATGCTTGTTTCTCCCTCAATTCGCCCCTGGTCAGTC
CCCTCTGGCCGCTGGCTTAGCTTCCCCTCCAGATATTTCTCGCCCCCGTCTCGTCTGGACACCATCATCATTATT
ATCCCTGACTCGACAATACCGCACAAACCATAAGCCAAAACAGTTCCTTTCCTTTGACTCGGGGGGGAGGGGGCT
CAGCATCGGCAACAGGCAGAAGGAAGGGCCGGGGCCCTTCTCACAGGTACTGAAGTCGTCGTGCCCAACTGATCC
TATCTCACGGCTGACCCTGACACGAACTCTGGCCAGCGCAATCATCATTGGGCGGTTCGGGGGAAGCTCTCGATG
GCCACGGTCCCGGGAACAGCGGCTCCTGAGCCCTCGCAGAGCCTGTCCAGCTCCGGAGACGCCCCCGTCGTCGGC
GAGGCCCAGCAGACACCGACGGCCCCGGCCGCCCAGCATGAAGCGCCTCCAGGGCCTCCGGGGCCTCCGCAACCG
CCGGCCGTTGCCAACTATGCCTTCTCCTCGCAGCTCGACATGGCCTCTTCGCAGACGTCGTTTGGCCATCAGGGG
CCCTATGACATGGCTTCCATGGCCGCCGCCTTGCCCGGCGTTGCCGCCTATCGTCCGGGCCACTATCCCCAGGGA
GGTCAGCGGTATATCCCGGCCACGTCGCCGCCCGTCGTCCCGCCGATGCCACACATGGCTCCGTACGGAGGTCCG
CCTCCGGTGGCCATGAGTCAGGGTTATTACGTGCCCCAGCCTCAGATGCCGCAGTATTACGCTGCTGGCCACATG
TCTCCGCCTCAGGGGCCCCCGGCTGCCAGGCAAGGTCTCGCCTACTATCCGGGCCAGATGATGATGAACCATCCG
CAGTCGGCCTTTTACTATCCGCAGGCCGGACACTATCCGGGGCAGCCGCAACACATGCCACCGGGCGTCGTCTCG
GGACACTTTGTCGCCAGCAGCCCGCCAAATCCTGATGTTCGGAAAGCTCGCTCCGCGGCAGACAGTTCTTCGATG
CCTGTTCAGGCTCACAAGCCGGTTCAAGGTAAGATGTTATTTGGATATGGCCACGCAGCGATTAATATCGGACCA
GACGAGCCGGGAAGCCGACAGAACGCTGTACGAGGACCGCCTAGGAAGCCTCGCCAGAGTGGTAAAGTTTACCTC
AGATGACTCCTCTCGTGGGCAGACGGTTAACGTATCCTTGTCATTTCTCCTCCAGGGCACGCCATCTGGATCGGC
AATCTTCCTCCACAGACGGATCTGATGAGCCTCGTTCACCATGTTTGCAAAGAGACGGCCGGGCTCGAGTCCCTG
TTCCTGATATCAAAGAGCAACTGCGCCTTTGCGAATTTCAAAGACGAAAACACATGCTTGGCTGCGCAGCAAAAG
CTGCACGACTCCAAGTTTCAGTCTGTTCGGCTTGTCAGTCGTCTGCGGAAGAACACGGTTGAGGGGGCCACGGGT
CTGACGGCGCCTACCGGTCCGGCTGCCAACTCCGTGAATACAGCAGTCCAGAACGAGCCATCTCAAGATAGCCCC
GGTCTGGACAACCGCAGCCCAGGCTCGGATGTTCGAAGCCCCAGTCCGCCAGTCAGCCAGCCAGCCAAGCCCAAG
ATGAACTCTGGAGGCGACGGCAACACCCAGAATGACAAGTTCTTCATCCTCAAGAGCTTGACCATGGAGGATCTC
GAGCTGAGCGTCCGGACCGGAATCTGGGCTACCCAGTCTCACAATGAAGACTCTCTCAACACTGCCTTCAAGGTT
GGCATACCATTCGGAGGGACTCAGTGTGCGAGTATTGTGCTAATATGAGGGCCAGAACTTTGACAATGTCTACCT
GATCTTCTCGGCCAACAAGTCGGGCGAGTATTTTGGATACGCCCGCATGGTATCCGAGATCAACGACGATCCAGC
GGCGGCCATCGAGTTTGCCCCGAAGTCACAGTCCACGAGCAGCCTGGACTTGCCAAAGGCGATCCCGACTGACGC
CACCGAATTCGCCCCCAAGGGCCGCATCATCGACGACTCTGCTCGTGGAACCATCTTCTGGGAGGCCGAGCGAGA
GGATTCAGAGAGCGGATCGGACAATGCCAGCGAGGTGTCGAGCAACAGGAGCACTGGCACCGAGGAGGAGACCAA
AACATGGGGCAAGCCTTTCAAGCTCGAATGGCTGTCCATTAGCCGGCTTCCGTTCTACCGAACACGAGGCCTGCG
AAACCCGTGGAACTCTAACAGAGAGGTCAAGATCGCGAGAGACGGGACCGAGCTGGAGCCGTCAGTGGGCCGCAG
ACTGATTGGCCTGTTCAACCGCGTTCAGAGCCCCGGGCCGATGCCGCCGGCGATGCGTCTGCCACCGACCATGAT
GCACGGCTACGTTCCCATCCGAGGGCACGGTCAATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail