Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3209
Gene name
LocationContig_285:21263..22613
Strand-
Gene length (bp)1350
Transcript length (bp)1224
Coding sequence length (bp)1224
Protein length (aa) 408

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01896 DNA_primase_S DNA primase small subunit 8.6E-64 97 327

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O14215|PRI1_SCHPO DNA primase small subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pri1 PE=1 SV=1 1 402 6.0E-162
sp|P10363|PRI1_YEAST DNA primase small subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRI1 PE=1 SV=2 1 403 1.0E-114
sp|P20664|PRI1_MOUSE DNA primase small subunit OS=Mus musculus GN=Prim1 PE=1 SV=1 1 398 2.0E-111
sp|P49642|PRI1_HUMAN DNA primase small subunit OS=Homo sapiens GN=PRIM1 PE=1 SV=1 1 398 1.0E-109
sp|Q24317|PRI1_DROME DNA primase small subunit OS=Drosophila melanogaster GN=DNApol-alpha50 PE=2 SV=2 4 397 2.0E-94
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Swissprot ID Swissprot Description Start End E-value
sp|O14215|PRI1_SCHPO DNA primase small subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pri1 PE=1 SV=1 1 402 6.0E-162
sp|P10363|PRI1_YEAST DNA primase small subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRI1 PE=1 SV=2 1 403 1.0E-114
sp|P20664|PRI1_MOUSE DNA primase small subunit OS=Mus musculus GN=Prim1 PE=1 SV=1 1 398 2.0E-111
sp|P49642|PRI1_HUMAN DNA primase small subunit OS=Homo sapiens GN=PRIM1 PE=1 SV=1 1 398 1.0E-109
sp|Q24317|PRI1_DROME DNA primase small subunit OS=Drosophila melanogaster GN=DNApol-alpha50 PE=2 SV=2 4 397 2.0E-94
sp|Q25998|PRI1_PLAFK DNA primase small subunit OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1 4 388 7.0E-78
sp|Q7KQM1|PRI1_PLAF7 DNA primase small subunit OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0366 PE=3 SV=1 4 388 7.0E-78
sp|P34471|PRI1_CAEEL DNA primase small subunit OS=Caenorhabditis elegans GN=pri-1 PE=3 SV=1 4 388 3.0E-63
sp|Q9HPU3|PRIS_HALSA DNA primase small subunit PriS OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=priS PE=3 SV=2 92 340 5.0E-07
sp|B0R5P1|PRIS_HALS3 DNA primase small subunit PriS OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=priS PE=3 SV=1 92 340 5.0E-07
sp|O29516|PRIS_ARCFU DNA primase small subunit PriS OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=priS PE=3 SV=2 28 180 2.0E-06
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GO

GO Term Description Terminal node
GO:0006269 DNA replication, synthesis of RNA primer Yes
GO:0003896 DNA primase activity Yes
GO:0006139 nucleobase-containing compound metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0016740 transferase activity No
GO:1901576 organic substance biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0008152 metabolic process No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0034062 5'-3' RNA polymerase activity No
GO:0016772 transferase activity, transferring phosphorus-containing groups No
GO:0009058 biosynthetic process No
GO:0009987 cellular process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0044237 cellular metabolic process No
GO:0003899 DNA-directed 5'-3' RNA polymerase activity No
GO:0016070 RNA metabolic process No
GO:0016779 nucleotidyltransferase activity No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0044249 cellular biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0140098 catalytic activity, acting on RNA No
GO:0090304 nucleic acid metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0097747 RNA polymerase activity No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5145
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7804
Ophiocordyceps australis map64 (Brazil) OphauB2|1835
Ophiocordyceps camponoti-rufipedis Ophun1|3209 (this protein)
Ophiocordyceps kimflemingae Ophio5|411
Ophiocordyceps subramaniannii Hirsu2|3552

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3209
MRSFYQRLFPWRQLFHWLNHGPTPTSDFANREFAFTLQNDAYLRYQSYATSDLLRKDVLRLVPSRFEIGPVYSTN
PRDRKTLRGSSAFKPIAKELCFDIDLTDYDGVRTCCDKANICRKCWAFITMAIRVVDVALRQDFGFAHILWVYSG
RRGAHAWVCDKKARSLDDQKRRAIAGYLEVVRGGVHGGKKVNVRRPLHPHLSRSLDLLKAHFQHDVLEAQDPWAT
AEQAEKLLQLLPDRTLNDSLRRKWEASPDGDSATKWADIDAVAKTGTSKSLDARALLEAKQDVVLEYGYPRLDVE
VSKKLNHLLKSPFVVHPGTGRVCVPIDTAALEDFDPLAVPTVQGLLAEVDGWKEEEGGGGGGKGVADWEKTSLKP
YVDYFRSFVAGLVRDEKGVRVKREREEDLMDF*
Coding >Ophun1|3209
ATGCGCAGCTTCTACCAGCGTCTCTTCCCCTGGCGTCAACTCTTCCACTGGCTTAACCACGGTCCGACGCCGACG
AGCGACTTTGCCAACCGCGAGTTTGCCTTTACGCTGCAGAACGACGCTTACCTGCGGTACCAGTCCTACGCTACT
TCAGACCTGCTTCGCAAGGACGTGTTGCGCCTCGTACCCTCACGCTTCGAAATAGGACCCGTTTACTCGACCAAC
CCTCGCGACCGAAAGACGCTGCGCGGCTCATCTGCTTTCAAGCCCATCGCCAAAGAGCTCTGCTTCGATATCGAC
TTGACCGACTACGACGGCGTGCGGACTTGCTGCGACAAGGCCAACATCTGCCGCAAGTGCTGGGCTTTTATAACC
ATGGCGATTCGGGTCGTCGACGTTGCTCTGCGTCAGGACTTTGGCTTCGCTCATATTCTTTGGGTTTACTCGGGT
CGCAGAGGTGCTCATGCTTGGGTGTGCGACAAGAAGGCTCGCTCCCTGGACGATCAGAAGAGGAGGGCTATTGCT
GGATACCTTGAAGTCGTCAGGGGGGGCGTCCACGGTGGCAAAAAGGTCAACGTTCGCCGTCCGCTGCATCCTCAC
CTCTCCCGCAGCCTCGACCTGCTGAAAGCGCACTTCCAGCACGACGTCCTCGAAGCCCAAGACCCCTGGGCAACG
GCCGAGCAAGCCGAGAAGCTCCTCCAGCTCCTCCCTGACCGCACGCTCAACGACTCGCTACGACGCAAGTGGGAG
GCATCACCAGACGGCGACTCAGCCACCAAATGGGCCGACATCGACGCCGTGGCCAAGACAGGCACCAGCAAGAGC
CTCGACGCCCGCGCCCTCCTCGAAGCCAAGCAGGACGTCGTCCTAGAGTACGGATACCCGCGGCTGGACGTCGAG
GTCAGCAAGAAGCTCAACCATCTTCTCAAGAGCCCCTTTGTCGTCCACCCGGGCACGGGCCGCGTGTGCGTGCCC
ATCGATACGGCGGCGCTGGAAGACTTTGATCCCCTTGCTGTGCCGACGGTTCAGGGCTTGCTGGCTGAGGTTGAT
GGCTGGAAAGAGGAAGAGGGGGGGGGAGGGGGCGGAAAGGGTGTGGCTGACTGGGAGAAGACGAGCTTGAAGCCG
TATGTTGACTACTTTAGGTCCTTTGTGGCTGGCTTGGTGAGGGATGAGAAGGGGGTGAGGGTTAAGCGGGAGCGG
GAGGAGGATTTGATGGATTTTTGA
Transcript >Ophun1|3209
ATGCGCAGCTTCTACCAGCGTCTCTTCCCCTGGCGTCAACTCTTCCACTGGCTTAACCACGGTCCGACGCCGACG
AGCGACTTTGCCAACCGCGAGTTTGCCTTTACGCTGCAGAACGACGCTTACCTGCGGTACCAGTCCTACGCTACT
TCAGACCTGCTTCGCAAGGACGTGTTGCGCCTCGTACCCTCACGCTTCGAAATAGGACCCGTTTACTCGACCAAC
CCTCGCGACCGAAAGACGCTGCGCGGCTCATCTGCTTTCAAGCCCATCGCCAAAGAGCTCTGCTTCGATATCGAC
TTGACCGACTACGACGGCGTGCGGACTTGCTGCGACAAGGCCAACATCTGCCGCAAGTGCTGGGCTTTTATAACC
ATGGCGATTCGGGTCGTCGACGTTGCTCTGCGTCAGGACTTTGGCTTCGCTCATATTCTTTGGGTTTACTCGGGT
CGCAGAGGTGCTCATGCTTGGGTGTGCGACAAGAAGGCTCGCTCCCTGGACGATCAGAAGAGGAGGGCTATTGCT
GGATACCTTGAAGTCGTCAGGGGGGGCGTCCACGGTGGCAAAAAGGTCAACGTTCGCCGTCCGCTGCATCCTCAC
CTCTCCCGCAGCCTCGACCTGCTGAAAGCGCACTTCCAGCACGACGTCCTCGAAGCCCAAGACCCCTGGGCAACG
GCCGAGCAAGCCGAGAAGCTCCTCCAGCTCCTCCCTGACCGCACGCTCAACGACTCGCTACGACGCAAGTGGGAG
GCATCACCAGACGGCGACTCAGCCACCAAATGGGCCGACATCGACGCCGTGGCCAAGACAGGCACCAGCAAGAGC
CTCGACGCCCGCGCCCTCCTCGAAGCCAAGCAGGACGTCGTCCTAGAGTACGGATACCCGCGGCTGGACGTCGAG
GTCAGCAAGAAGCTCAACCATCTTCTCAAGAGCCCCTTTGTCGTCCACCCGGGCACGGGCCGCGTGTGCGTGCCC
ATCGATACGGCGGCGCTGGAAGACTTTGATCCCCTTGCTGTGCCGACGGTTCAGGGCTTGCTGGCTGAGGTTGAT
GGCTGGAAAGAGGAAGAGGGGGGGGGAGGGGGCGGAAAGGGTGTGGCTGACTGGGAGAAGACGAGCTTGAAGCCG
TATGTTGACTACTTTAGGTCCTTTGTGGCTGGCTTGGTGAGGGATGAGAAGGGGGTGAGGGTTAAGCGGGAGCGG
GAGGAGGATTTGATGGATTTTTGA
Gene >Ophun1|3209
ATGCGCAGCTTCTACCAGCGTCTCTTCCCCTGGCGTCAACTCTTCCACTGGCTTAACCACGGTCCGACGCCGACG
AGCGACTTTGCCAACCGCGAGTTTGCCTTTACGCTGCAGAACGACGCTTACCTGCGGTACCAGTCCTACGCTACT
TCAGACCTGTTGCGTCTTTCCCCCCATTCTAGATACGGAAGTGAAGAAGTCTTTGTTTGGCTGACGGTGGGAAAG
GCTTCGCAAGGACGTGTTGCGCCTCGTACCCTCACGCTTCGAAATAGGACCCGTTTACTCGACCAACCCTCGCGA
CCGAAAGACGCTGCGCGGCTCATCTGCTTTCAAGCCCATCGCCAAAGAGCTCTGCTTCGATATCGACTTGACCGA
CTACGACGGCGTGCGGACTTGCTGCGACAAGGCCAACATCTGCCGCAAGTGCTGGGCTTTTATAACCATGGCGAT
TCGGGTCGTCGACGTTGCTCTGCGTCAGGACTTTGGCTTCGCTCATATTCTTTGGGTTTACTCGGGTCGCAGAGG
TGCTCATGCTTGGGTGTGCGACAAGAAGGCTCGCTCCCTGGACGATCAGAAGAGGAGGGCTATTGCTGGATACCT
TGAAGTCGTCAGGGGGGGCGTCCACGGTGGCAAAAAGGTCAACGTTCGCCGTCCGCTGCATCCTCACCTCTCGTG
CGTTTTCCCTTCCCTGTTTGCCTGATGGATGGAGCTGACGTGACTTGTGCAAACAGCCGCAGCCTCGACCTGCTG
AAAGCGCACTTCCAGCACGACGTCCTCGAAGCCCAAGACCCCTGGGCAACGGCCGAGCAAGCCGAGAAGCTCCTC
CAGCTCCTCCCTGACCGCACGCTCAACGACTCGCTACGACGCAAGTGGGAGGCATCACCAGACGGCGACTCAGCC
ACCAAATGGGCCGACATCGACGCCGTGGCCAAGACAGGCACCAGCAAGAGCCTCGACGCCCGCGCCCTCCTCGAA
GCCAAGCAGGACGTCGTCCTAGAGTACGGATACCCGCGGCTGGACGTCGAGGTCAGCAAGAAGCTCAACCATCTT
CTCAAGAGCCCCTTTGTCGTCCACCCGGGCACGGGCCGCGTGTGCGTGCCCATCGATACGGCGGCGCTGGAAGAC
TTTGATCCCCTTGCTGTGCCGACGGTTCAGGGCTTGCTGGCTGAGGTTGATGGCTGGAAAGAGGAAGAGGGGGGG
GGAGGGGGCGGAAAGGGTGTGGCTGACTGGGAGAAGACGAGCTTGAAGCCGTATGTTGACTACTTTAGGTCCTTT
GTGGCTGGCTTGGTGAGGGATGAGAAGGGGGTGAGGGTTAAGCGGGAGCGGGAGGAGGATTTGATGGATTTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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