Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3206
Gene name
LocationContig_285:15776..16575
Strand-
Gene length (bp)799
Transcript length (bp)624
Coding sequence length (bp)624
Protein length (aa) 208

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P25710|NUJM_NEUCR NADH-ubiquinone oxidoreductase 21.3 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B13D24.010 PE=4 SV=1 13 201 2.0E-46

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 51 0.45

Transmembrane Domains

Domain # Start End Length
1 24 46 22
2 59 81 22
3 94 111 17
4 116 135 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3206
MEEGRGKPPVFSQEADEPFVPHDVIGLSAQTGLMGAGAGLFIASIRNAMSRGNVGALSVFTRGGPIIGMAAAAPA
TFAFVYAATSNLRQKSDTWAATFAGFMSGGVLGLPFRKLPVVLGLGAFVGVLQGSFFFLGNRLDSFYDDEDEFER
REIIRRTTRIPVEQTIAEIGEGPFIKPPGYEERRRKRIKEKYGWDINPVSATIDGSH*
Coding >Ophun1|3206
ATGGAAGAGGGCCGTGGAAAACCGCCAGTGTTCAGCCAAGAAGCCGATGAGCCGTTTGTGCCGCACGACGTCATT
GGTCTGTCCGCCCAGACGGGATTGATGGGCGCCGGCGCTGGCCTCTTCATCGCCTCGATCCGCAATGCCATGTCG
AGAGGCAACGTCGGCGCACTGAGCGTCTTTACTCGTGGCGGTCCCATCATTGGAATGGCTGCTGCTGCTCCTGCT
ACCTTTGCCTTCGTCTACGCTGCCACCTCGAACCTGCGGCAGAAGTCGGACACGTGGGCCGCTACGTTTGCAGGC
TTCATGAGCGGTGGCGTTCTTGGCCTACCATTCCGGAAACTGCCCGTCGTCCTCGGGCTGGGTGCCTTTGTCGGT
GTCCTTCAGGGCAGCTTCTTCTTCCTTGGCAACCGCCTCGACAGTTTCTACGATGACGAAGACGAGTTCGAGCGT
AGGGAGATTATCCGTCGCACCACCCGCATACCCGTGGAACAGACCATTGCCGAAATCGGCGAGGGTCCCTTCATC
AAACCACCGGGTTACGAGGAGCGTCGGCGCAAGCGCATCAAGGAAAAGTACGGCTGGGATATCAACCCAGTCAGT
GCCACCATCGACGGCAGCCACTAG
Transcript >Ophun1|3206
ATGGAAGAGGGCCGTGGAAAACCGCCAGTGTTCAGCCAAGAAGCCGATGAGCCGTTTGTGCCGCACGACGTCATT
GGTCTGTCCGCCCAGACGGGATTGATGGGCGCCGGCGCTGGCCTCTTCATCGCCTCGATCCGCAATGCCATGTCG
AGAGGCAACGTCGGCGCACTGAGCGTCTTTACTCGTGGCGGTCCCATCATTGGAATGGCTGCTGCTGCTCCTGCT
ACCTTTGCCTTCGTCTACGCTGCCACCTCGAACCTGCGGCAGAAGTCGGACACGTGGGCCGCTACGTTTGCAGGC
TTCATGAGCGGTGGCGTTCTTGGCCTACCATTCCGGAAACTGCCCGTCGTCCTCGGGCTGGGTGCCTTTGTCGGT
GTCCTTCAGGGCAGCTTCTTCTTCCTTGGCAACCGCCTCGACAGTTTCTACGATGACGAAGACGAGTTCGAGCGT
AGGGAGATTATCCGTCGCACCACCCGCATACCCGTGGAACAGACCATTGCCGAAATCGGCGAGGGTCCCTTCATC
AAACCACCGGGTTACGAGGAGCGTCGGCGCAAGCGCATCAAGGAAAAGTACGGCTGGGATATCAACCCAGTCAGT
GCCACCATCGACGGCAGCCACTAG
Gene >Ophun1|3206
ATGGAAGAGGGCCGTGGAAAACCGCCAGTGTTCAGCCAAGAAGCCGATGAGCCGTTTGTGCCGCACGACGTCATT
GGTCTGTCCGCCCAGACGGGATTGATGGGCGCCGGCGCTGGCCTCTTCATCGCCTCGATCCGCAATGCCATGTCG
AGAGGCAACGTCGGCGCACTGAGCGTCTTTACTCGTGGCGGTCCCATCATTGGAATGGCTGGTCCGTTGAGCGGC
TCTGTCATTGCTGCTCTCGTCTTGGGCTGACGTGCTGGCGCTCGCGGTAGCTGCTGCTCCTGCTACCTTTGCCTT
CGTCTACGCTGCCACCTCGAACCTGCGGCAGAAGTCGGACACGTGGGCCGCTACGTTTGCAGGCTTCATGAGCGG
TGGCGTTCTTGGCCTACCATGTGCGTTACCGCCCTTCTCGGCATGTCTCCGTGCCGCAACTGATTCGTCGCTTAG
TCCGGAAACTGCCCGTCGTCCTCGGGCTGGGTGCCTTTGTCGGTGTCCTTCAGGGCAGCTTCTTCTTCCTTGGCA
ACCGCCTCGACAGTTTCTACGATGACGAAGACGAGTTCGAGCGTAGGGAGATTATCCGTCGCACCACCCGCATAC
CCGTGGAACAGACCATTGCCGAAATCGGCGAGGGTCCCTGTGAGCATCCCTGATTCTCTCTTCATCTATACTCCT
GACCGGTCTTTCTCGTTCAGTCATCAAACCACCGGGTTACGAGGAGCGTCGGCGCAAGCGCATCAAGGAAAAGTA
CGGCTGGGATATCAACCCAGTCAGTGCCACCATCGACGGCAGCCACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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