Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3204
Gene name
LocationContig_285:9413..11249
Strand-
Gene length (bp)1836
Transcript length (bp)1482
Coding sequence length (bp)1482
Protein length (aa) 494

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02535 Zip ZIP Zinc transporter 1.6E-11 164 267
PF02535 Zip ZIP Zinc transporter 4.1E-12 385 489

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 142 493 8.0E-28
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 264 493 2.0E-22
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 159 493 2.0E-22
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 125 493 9.0E-21
sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 147 493 8.0E-19
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Swissprot ID Swissprot Description Start End E-value
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 142 493 8.0E-28
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 264 493 2.0E-22
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 159 493 2.0E-22
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 125 493 9.0E-21
sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 147 493 8.0E-19
sp|O81850|IRT2_ARATH Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1 139 493 3.0E-18
sp|Q38856|IRT1_ARATH Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=2 146 493 2.0E-16
sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=1 SV=2 145 493 1.0E-15
sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 136 493 1.0E-14
sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 139 493 6.0E-13
sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 153 493 5.0E-12
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=3 287 493 1.0E-11
sp|O04089|ZIP4_ARATH Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1 282 493 1.0E-11
sp|O82643|ZIP9_ARATH Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1 282 493 1.0E-11
sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 145 493 3.0E-11
sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 263 493 2.0E-10
sp|Q0DHE3|ZIP9_ORYSJ Zinc transporter 9 OS=Oryza sativa subsp. japonica GN=ZIP9 PE=3 SV=3 388 493 9.0E-10
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 161 232 3.0E-08
sp|Q5Z653|ZIP10_ORYSJ Zinc transporter 10 OS=Oryza sativa subsp. japonica GN=ZIP10 PE=3 SV=2 279 453 1.0E-07
sp|Q6L8F7|ZIP7_ORYSJ Zinc transporter 7 OS=Oryza sativa subsp. japonica GN=ZIP7 PE=2 SV=1 282 493 8.0E-07
sp|Q6ZJ91|ZIP4_ORYSJ Zinc transporter 4 OS=Oryza sativa subsp. japonica GN=ZIP4 PE=2 SV=1 287 493 5.0E-06
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GO

GO Term Description Terminal node
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0030001 metal ion transport Yes
GO:0055085 transmembrane transport Yes
GO:0016020 membrane Yes
GO:0006810 transport No
GO:0015075 ion transmembrane transporter activity No
GO:0009987 cellular process No
GO:0008324 cation transmembrane transporter activity No
GO:0051234 establishment of localization No
GO:0006811 ion transport No
GO:0006812 cation transport No
GO:0051179 localization No
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0003674 molecular_function No
GO:0008150 biological_process No
GO:0005215 transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0022857 transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 165 187 22
2 199 221 22
3 236 258 22
4 297 319 22
5 394 413 19
6 425 447 22
7 467 489 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3204
MLAALALVAGCGLVAGLETTSAGLMARQAPGPTPAPTAAAAGAVETVTGCSMRGSQLICTASGTDFLIHSTPTQT
TALPAQFTGCHHHGSEMFCIAPDGDEVEVGPANEPAGEHHDHDHHDHDHHGSGGRNCHFHAGVEHCVGGSEEEES
QPQCAGVKREYNVGLRVGLLFAILATSALGVFGPILLQRLLPRKLSLAFIVLKQFGTGIIISTAFVHLYTHASLM
FGNKCLGELGYEATTSAILMAGLVLSFLVEYAGRRIVSAKVRSSSEQKDSALLSTEVVSILVMEAGILFHSLLIG
LTLVVAGDSFFLTLFVVILFHQVFEGLALGTRIATIGSDIPDSVNAANGSASSLGGEKTRANSDPDEGAVDHRDD
SAVTPKPVVGLSMKKKLGLAALFAFITPIGMAIGIGVLQKFNGNDKSTLIAIGTLDALSAGILAWVGIVEMWAAD
WMAGGVGHGHGGELADANWLTVALSGSALFAGMALMSLLGKWA*
Coding >Ophun1|3204
ATGCTCGCAGCTTTAGCCCTCGTCGCGGGCTGCGGCCTCGTTGCCGGCCTCGAGACCACTTCAGCCGGGCTGATG
GCCCGTCAAGCGCCGGGTCCGACTCCGGCCCCGACGGCGGCGGCGGCTGGAGCTGTTGAGACTGTGACGGGCTGC
TCCATGCGCGGATCGCAACTGATTTGCACCGCTTCTGGGACCGACTTTCTCATTCACTCGACGCCGACGCAGACT
ACGGCTTTGCCCGCGCAGTTTACGGGCTGCCATCATCATGGATCCGAGATGTTCTGCATTGCCCCTGATGGTGAC
GAGGTCGAGGTCGGACCGGCCAACGAGCCAGCCGGCGAGCATCACGACCATGATCATCACGACCATGATCATCAC
GGCAGCGGTGGCCGAAACTGTCACTTTCATGCCGGCGTCGAGCACTGCGTCGGCGGCAGTGAGGAAGAAGAGTCT
CAGCCGCAGTGTGCTGGCGTCAAGCGTGAATACAACGTCGGTCTTCGCGTCGGCCTTCTCTTTGCCATTCTCGCC
ACCAGCGCTCTCGGCGTCTTCGGGCCCATTCTGCTGCAGAGGCTGCTTCCCCGGAAGCTCAGCCTGGCCTTTATC
GTGCTGAAGCAGTTTGGCACCGGCATCATCATCTCGACGGCGTTTGTTCACCTCTACACTCATGCCTCGCTCATG
TTTGGCAACAAGTGTCTCGGAGAGCTGGGCTACGAGGCCACCACGTCGGCCATCCTCATGGCGGGCTTGGTCTTG
TCCTTTCTCGTCGAGTATGCCGGTCGGCGTATCGTTTCCGCCAAAGTTCGTTCGTCGTCGGAGCAGAAAGACAGC
GCGCTGCTCTCTACCGAGGTCGTCAGCATCCTCGTCATGGAGGCCGGCATCCTGTTCCACTCTCTGCTCATCGGC
CTCACCCTCGTCGTCGCCGGTGACAGTTTCTTCCTCACCCTCTTTGTCGTCATCCTCTTCCACCAGGTCTTTGAA
GGACTTGCTCTCGGCACCCGTATCGCCACAATCGGCTCCGACATTCCTGACTCGGTCAACGCTGCCAATGGTTCC
GCTTCCAGCCTGGGCGGCGAAAAGACGCGTGCCAACTCGGACCCCGACGAAGGCGCCGTTGACCACCGCGATGAC
TCGGCCGTGACTCCCAAGCCCGTGGTGGGCCTGTCGATGAAGAAGAAGCTCGGGCTCGCGGCCCTCTTTGCCTTC
ATCACCCCCATCGGCATGGCCATTGGTATCGGCGTCCTGCAAAAGTTCAATGGCAACGACAAGTCTACCTTGATC
GCCATTGGCACGCTGGACGCCCTTTCTGCCGGCATCCTGGCCTGGGTGGGCATCGTGGAGATGTGGGCTGCTGAC
TGGATGGCGGGCGGCGTCGGTCACGGCCACGGGGGAGAGCTGGCGGATGCCAACTGGCTCACCGTTGCCCTATCT
GGCTCTGCCCTCTTCGCGGGTATGGCGCTTATGAGCTTGCTCGGGAAGTGGGCTTAG
Transcript >Ophun1|3204
ATGCTCGCAGCTTTAGCCCTCGTCGCGGGCTGCGGCCTCGTTGCCGGCCTCGAGACCACTTCAGCCGGGCTGATG
GCCCGTCAAGCGCCGGGTCCGACTCCGGCCCCGACGGCGGCGGCGGCTGGAGCTGTTGAGACTGTGACGGGCTGC
TCCATGCGCGGATCGCAACTGATTTGCACCGCTTCTGGGACCGACTTTCTCATTCACTCGACGCCGACGCAGACT
ACGGCTTTGCCCGCGCAGTTTACGGGCTGCCATCATCATGGATCCGAGATGTTCTGCATTGCCCCTGATGGTGAC
GAGGTCGAGGTCGGACCGGCCAACGAGCCAGCCGGCGAGCATCACGACCATGATCATCACGACCATGATCATCAC
GGCAGCGGTGGCCGAAACTGTCACTTTCATGCCGGCGTCGAGCACTGCGTCGGCGGCAGTGAGGAAGAAGAGTCT
CAGCCGCAGTGTGCTGGCGTCAAGCGTGAATACAACGTCGGTCTTCGCGTCGGCCTTCTCTTTGCCATTCTCGCC
ACCAGCGCTCTCGGCGTCTTCGGGCCCATTCTGCTGCAGAGGCTGCTTCCCCGGAAGCTCAGCCTGGCCTTTATC
GTGCTGAAGCAGTTTGGCACCGGCATCATCATCTCGACGGCGTTTGTTCACCTCTACACTCATGCCTCGCTCATG
TTTGGCAACAAGTGTCTCGGAGAGCTGGGCTACGAGGCCACCACGTCGGCCATCCTCATGGCGGGCTTGGTCTTG
TCCTTTCTCGTCGAGTATGCCGGTCGGCGTATCGTTTCCGCCAAAGTTCGTTCGTCGTCGGAGCAGAAAGACAGC
GCGCTGCTCTCTACCGAGGTCGTCAGCATCCTCGTCATGGAGGCCGGCATCCTGTTCCACTCTCTGCTCATCGGC
CTCACCCTCGTCGTCGCCGGTGACAGTTTCTTCCTCACCCTCTTTGTCGTCATCCTCTTCCACCAGGTCTTTGAA
GGACTTGCTCTCGGCACCCGTATCGCCACAATCGGCTCCGACATTCCTGACTCGGTCAACGCTGCCAATGGTTCC
GCTTCCAGCCTGGGCGGCGAAAAGACGCGTGCCAACTCGGACCCCGACGAAGGCGCCGTTGACCACCGCGATGAC
TCGGCCGTGACTCCCAAGCCCGTGGTGGGCCTGTCGATGAAGAAGAAGCTCGGGCTCGCGGCCCTCTTTGCCTTC
ATCACCCCCATCGGCATGGCCATTGGTATCGGCGTCCTGCAAAAGTTCAATGGCAACGACAAGTCTACCTTGATC
GCCATTGGCACGCTGGACGCCCTTTCTGCCGGCATCCTGGCCTGGGTGGGCATCGTGGAGATGTGGGCTGCTGAC
TGGATGGCGGGCGGCGTCGGTCACGGCCACGGGGGAGAGCTGGCGGATGCCAACTGGCTCACCGTTGCCCTATCT
GGCTCTGCCCTCTTCGCGGGTATGGCGCTTATGAGCTTGCTCGGGAAGTGGGCTTAG
Gene >Ophun1|3204
ATGCTCGCAGCTTTAGCCCTCGTCGCGGGCTGCGGCCTCGTTGCCGGCCTCGAGACCACTTCAGCCGGGCTGATG
GCCCGTCAAGCGCCGGGTCCGACTCCGGCCCCGACGGCGGCGGCGGCTGGAGCTGTTGAGACTGTGACGGGCTGC
TCCATGCGCGGATCGCAACTGTTTGTCTTGTCCTTTACTATTCTTCTGTCAGGGGATGGATTGGTTGCTTATGGC
TTGGAAGGATTTGCACCGCTTCTGGGACCGACTTTCTCATTCACTCGACGCCGACGCAGACTACGGCTTTGCCCG
CGCAGTTTACGGGCTGCCATCATCATGGATCCGAGATGTGAGTTGTCCGTCTTGGTGTTTAAAAGTACGCAGCAG
CTGACTCGGGACTTCTGTCAGGTTCTGCATTGCCCCTGATGGTGACGAGGTCGAGGTCGGACCGGCCAACGAGCC
AGCCGGCGAGCATCACGACCATGATCATCACGACCATGATCATCACGGCAGCGGTGGCCGAAACTGTCACTTTCA
TGCCGGCGTCGAGTAAGCAAGCCTTGTTCTGACCTGTCGTCTGCTCAAGTTGACCGTCTTTTAGGCACTGCGTCG
GCGGCAGTGAGGAAGAAGAGTCTCAGCCGCAGTGTGCTGGCGTCAAGCGTGAATACAACGTCGGTCTTCGCGTCG
GCCTTCTCTTTGCCATTCTCGCCACCAGCGCTCTCGGTTCGTCTGCCTCATTCAGAAGTTCATCTCTTTGAATCT
TGCCAGCTGACACTGTTACTCGTACAAGGCGTCTTCGGGCCCATTCTGCTGCAGAGGCTGCTTCCCCGGAAGCTC
AGCCTGGCCTTTATCGTGCTGAAGCAGTTTGGCACCGGCATCATCATCTCGACGGCGTTTGTTCACGTACGTGTC
GCCATCTGTGTAGAGAACCTGCGTCTAACCACTGCTTACAGCTCTACACTCATGCCTCGCTCATGTTTGGCAACA
AGTGTCTCGGAGAGCTGGGCTACGAGGCCACCACGTCGGCCATCCTCATGGCGGGCTTGGTCTTGTCCTTTCTCG
TCGAGTATGCCGGTCGGCGTATCGTTTCCGCCAAAGTTCGTTCGTCGTCGGAGCAGAAAGACAGCGCGCTGCTCT
CTACCGAGGTCGTCAGCATCCTCGTCATGGAGGCCGGCATCCTGTTCCACTCTCTGCGTATGCCACCTCCCCCCT
TAGCTACTTCTGTGGGAAACCAACGCTCATGTCTCTCCGCATCCAGTCATCGGCCTCACCCTCGTCGTCGCCGGT
GACAGTTTCTTCCTCACCCTCTTTGTCGTCATCCTCTTCCACCAGGTCTTTGAAGGACTTGCTCTCGGCACCCGT
ATCGCCACAATCGGCTCCGACATTCCTGACTCGGTCAACGCTGCCAATGGTTCCGCTTCCAGCCTGGGCGGCGAA
AAGACGCGTGCCAACTCGGACCCCGACGAAGGCGCCGTTGACCACCGCGATGACTCGGCCGTGACTCCCAAGCCC
GTGGTGGGCCTGTCGATGAAGAAGAAGCTCGGGCTCGCGGCCCTCTTTGCCTTCATCACCCCCATCGGCATGGCC
ATTGGTATCGGCGTCCTGCAAAAGTTCAATGGCAACGACAAGTCTACCTTGATCGCCATTGGCACGCTGGACGCC
CTTTCTGCCGGCATCCTGGCCTGGGTGGGCATCGTGGAGATGTGGGCTGCTGACTGGATGGCGGGCGGCGTCGGT
CACGGCCACGGGGGAGAGCTGGCGGATGCCAACTGGCTCACCGTTGCCCTATCTGGCTCTGCCCTCTTCGCGGGT
ATGGCGCTTATGAGCTTGCTCGGGAAGTGGGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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