Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3182
Gene name
LocationContig_283:1692..2832
Strand+
Gene length (bp)1140
Transcript length (bp)1140
Coding sequence length (bp)1140
Protein length (aa) 380

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10294 Methyltransf_16 Lysine methyltransferase 1.3E-20 156 343

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O13926|YF66_SCHPO UPF0665 family protein C23C4.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23C4.06c PE=3 SV=1 1 379 9.0E-18

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3182
MHYIRLLRPPKLLRSPRGLRAELVLAVTTDLGDAFLRPEAALSLVVRADVTSSSGAVVSCQLQPTGGKLQWRAGD
RFSKPTLDLPASVVEAVAARRRVELCVSPEAPFAADGLPAIRASTFGLVMPVWVALSGSGDGPDHVCTRRLQLGQ
DSVSGSLELEEELGDSIARHIWDSSPAVLAAVADVCCREPCVRALLAADDDGSGPVNLLELGCGVGILGAGLCAL
RPGFTGTILMTDLDEAESRARANMGLLGNTRPDGGRSLLYESLDWEEGRHGRFGPLVRSQKWDVFMLSDCTYNTD
TLPALVATLSALHDHNAAWSGRGFVSRTWVATKTRHESERAVLGLLADDGWQTVATTTLPLPVLGGQEQAIDLYL
FEKE*
Coding >Ophun1|3182
ATGCATTATATCCGCCTCCTGCGACCTCCAAAGCTGCTCCGGTCGCCTCGTGGCCTGCGGGCGGAGCTTGTCTTG
GCCGTCACAACCGATCTTGGAGACGCCTTCCTGCGGCCCGAAGCGGCCCTGAGCCTCGTGGTCCGGGCCGACGTC
ACCTCGTCTTCTGGCGCTGTCGTCTCATGCCAGCTGCAGCCGACGGGCGGGAAGCTGCAGTGGCGGGCTGGGGAT
CGGTTCTCGAAGCCGACGTTGGATCTGCCGGCGTCGGTGGTTGAGGCCGTGGCGGCCAGGCGCAGGGTCGAGCTG
TGTGTTAGTCCGGAGGCGCCCTTTGCCGCTGATGGGCTTCCCGCCATCCGGGCGTCGACTTTCGGTCTCGTGATG
CCGGTATGGGTTGCGCTGAGCGGCTCCGGCGACGGTCCCGATCACGTCTGCACCCGGAGGCTCCAGCTCGGTCAA
GACTCGGTGTCTGGCAGTCTCGAGCTTGAGGAGGAGCTGGGTGATAGCATTGCTCGTCACATCTGGGACTCCAGC
CCGGCGGTGCTCGCCGCCGTGGCCGATGTCTGCTGCCGCGAGCCATGCGTGCGGGCCTTGCTTGCTGCTGACGAT
GATGGATCGGGACCTGTCAACCTGCTCGAGCTCGGCTGCGGCGTCGGCATCCTCGGCGCCGGTCTATGTGCCCTC
CGTCCGGGCTTCACCGGGACCATCCTTATGACGGATCTCGACGAGGCCGAGAGCCGCGCCCGGGCCAACATGGGC
CTCCTGGGGAACACGCGCCCGGATGGCGGCCGCAGCCTGCTGTACGAGAGCCTGGACTGGGAAGAGGGCCGTCAT
GGGCGTTTCGGCCCGCTGGTGCGCAGCCAGAAATGGGACGTCTTCATGCTCAGCGACTGCACTTACAACACCGAC
ACGCTGCCTGCGCTGGTGGCTACTCTGTCGGCGCTGCACGATCACAACGCCGCCTGGTCGGGTCGCGGCTTCGTC
TCCAGGACATGGGTGGCGACCAAGACGCGCCACGAGTCGGAGCGGGCTGTGCTGGGATTGCTGGCCGACGACGGA
TGGCAGACGGTGGCGACTACGACGCTGCCACTTCCGGTCCTGGGTGGTCAAGAGCAGGCCATCGACTTGTATCTC
TTCGAGAAGGAGTAG
Transcript >Ophun1|3182
ATGCATTATATCCGCCTCCTGCGACCTCCAAAGCTGCTCCGGTCGCCTCGTGGCCTGCGGGCGGAGCTTGTCTTG
GCCGTCACAACCGATCTTGGAGACGCCTTCCTGCGGCCCGAAGCGGCCCTGAGCCTCGTGGTCCGGGCCGACGTC
ACCTCGTCTTCTGGCGCTGTCGTCTCATGCCAGCTGCAGCCGACGGGCGGGAAGCTGCAGTGGCGGGCTGGGGAT
CGGTTCTCGAAGCCGACGTTGGATCTGCCGGCGTCGGTGGTTGAGGCCGTGGCGGCCAGGCGCAGGGTCGAGCTG
TGTGTTAGTCCGGAGGCGCCCTTTGCCGCTGATGGGCTTCCCGCCATCCGGGCGTCGACTTTCGGTCTCGTGATG
CCGGTATGGGTTGCGCTGAGCGGCTCCGGCGACGGTCCCGATCACGTCTGCACCCGGAGGCTCCAGCTCGGTCAA
GACTCGGTGTCTGGCAGTCTCGAGCTTGAGGAGGAGCTGGGTGATAGCATTGCTCGTCACATCTGGGACTCCAGC
CCGGCGGTGCTCGCCGCCGTGGCCGATGTCTGCTGCCGCGAGCCATGCGTGCGGGCCTTGCTTGCTGCTGACGAT
GATGGATCGGGACCTGTCAACCTGCTCGAGCTCGGCTGCGGCGTCGGCATCCTCGGCGCCGGTCTATGTGCCCTC
CGTCCGGGCTTCACCGGGACCATCCTTATGACGGATCTCGACGAGGCCGAGAGCCGCGCCCGGGCCAACATGGGC
CTCCTGGGGAACACGCGCCCGGATGGCGGCCGCAGCCTGCTGTACGAGAGCCTGGACTGGGAAGAGGGCCGTCAT
GGGCGTTTCGGCCCGCTGGTGCGCAGCCAGAAATGGGACGTCTTCATGCTCAGCGACTGCACTTACAACACCGAC
ACGCTGCCTGCGCTGGTGGCTACTCTGTCGGCGCTGCACGATCACAACGCCGCCTGGTCGGGTCGCGGCTTCGTC
TCCAGGACATGGGTGGCGACCAAGACGCGCCACGAGTCGGAGCGGGCTGTGCTGGGATTGCTGGCCGACGACGGA
TGGCAGACGGTGGCGACTACGACGCTGCCACTTCCGGTCCTGGGTGGTCAAGAGCAGGCCATCGACTTGTATCTC
TTCGAGAAGGAGTAG
Gene >Ophun1|3182
ATGCATTATATCCGCCTCCTGCGACCTCCAAAGCTGCTCCGGTCGCCTCGTGGCCTGCGGGCGGAGCTTGTCTTG
GCCGTCACAACCGATCTTGGAGACGCCTTCCTGCGGCCCGAAGCGGCCCTGAGCCTCGTGGTCCGGGCCGACGTC
ACCTCGTCTTCTGGCGCTGTCGTCTCATGCCAGCTGCAGCCGACGGGCGGGAAGCTGCAGTGGCGGGCTGGGGAT
CGGTTCTCGAAGCCGACGTTGGATCTGCCGGCGTCGGTGGTTGAGGCCGTGGCGGCCAGGCGCAGGGTCGAGCTG
TGTGTTAGTCCGGAGGCGCCCTTTGCCGCTGATGGGCTTCCCGCCATCCGGGCGTCGACTTTCGGTCTCGTGATG
CCGGTATGGGTTGCGCTGAGCGGCTCCGGCGACGGTCCCGATCACGTCTGCACCCGGAGGCTCCAGCTCGGTCAA
GACTCGGTGTCTGGCAGTCTCGAGCTTGAGGAGGAGCTGGGTGATAGCATTGCTCGTCACATCTGGGACTCCAGC
CCGGCGGTGCTCGCCGCCGTGGCCGATGTCTGCTGCCGCGAGCCATGCGTGCGGGCCTTGCTTGCTGCTGACGAT
GATGGATCGGGACCTGTCAACCTGCTCGAGCTCGGCTGCGGCGTCGGCATCCTCGGCGCCGGTCTATGTGCCCTC
CGTCCGGGCTTCACCGGGACCATCCTTATGACGGATCTCGACGAGGCCGAGAGCCGCGCCCGGGCCAACATGGGC
CTCCTGGGGAACACGCGCCCGGATGGCGGCCGCAGCCTGCTGTACGAGAGCCTGGACTGGGAAGAGGGCCGTCAT
GGGCGTTTCGGCCCGCTGGTGCGCAGCCAGAAATGGGACGTCTTCATGCTCAGCGACTGCACTTACAACACCGAC
ACGCTGCCTGCGCTGGTGGCTACTCTGTCGGCGCTGCACGATCACAACGCCGCCTGGTCGGGTCGCGGCTTCGTC
TCCAGGACATGGGTGGCGACCAAGACGCGCCACGAGTCGGAGCGGGCTGTGCTGGGATTGCTGGCCGACGACGGA
TGGCAGACGGTGGCGACTACGACGCTGCCACTTCCGGTCCTGGGTGGTCAAGAGCAGGCCATCGACTTGTATCTC
TTCGAGAAGGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail