Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3171
Gene name
LocationContig_281:16740..17391
Strand-
Gene length (bp)651
Transcript length (bp)651
Coding sequence length (bp)651
Protein length (aa) 217

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07947 YhhN YhhN family 5.5E-32 34 214

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 42 64 22
3 77 99 22
4 114 136 22
5 143 165 22
6 193 215 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3171
MEASLLEKSLLLCSFASALVYGLLVRAPPSRPRMAYKAASTALLSLLAAAQDSSLLLVVALALGSVGDAFLAWPG
DVAFLRGLGSFLAAHVLYSALLWRVGGGVTALGAESWRSVMSALAVVSAPAMMLALVPKVGPSLRFPIALYCTVI
LCMLLGAVTVPGQQVAAGAVLFASSDSLLAADEFLVDAQSEHRAWMQNAVWILYYLGQLLIVTGFR*
Coding >Ophun1|3171
ATGGAAGCGTCATTGCTGGAGAAGAGCCTGCTCTTGTGCTCCTTCGCCTCGGCCCTTGTCTACGGTCTGCTAGTC
CGAGCACCGCCCAGCCGCCCGCGCATGGCTTACAAGGCGGCCTCTACGGCGCTGCTGTCCCTTCTCGCCGCCGCG
CAGGACTCATCGTTGCTGCTCGTGGTCGCCTTGGCCCTCGGTTCCGTGGGAGATGCCTTTCTTGCCTGGCCCGGA
GACGTGGCCTTTCTTCGCGGACTGGGGTCCTTTCTGGCCGCTCACGTCCTCTACAGCGCCCTCTTGTGGCGCGTG
GGCGGAGGCGTCACCGCTCTCGGTGCTGAAAGTTGGCGGAGTGTGATGTCTGCGCTTGCGGTGGTCTCGGCGCCG
GCCATGATGTTGGCGCTGGTACCCAAGGTCGGTCCGTCGTTGCGCTTCCCCATCGCCCTCTACTGCACTGTCATC
CTTTGCATGCTTCTCGGAGCCGTGACGGTGCCTGGCCAGCAGGTTGCCGCTGGTGCCGTCTTGTTCGCCTCGTCG
GATTCACTGCTGGCGGCGGATGAGTTTCTCGTCGACGCCCAGTCAGAGCACCGAGCTTGGATGCAAAATGCAGTC
TGGATCTTGTACTACCTCGGCCAACTGCTCATCGTGACTGGATTCCGGTGA
Transcript >Ophun1|3171
ATGGAAGCGTCATTGCTGGAGAAGAGCCTGCTCTTGTGCTCCTTCGCCTCGGCCCTTGTCTACGGTCTGCTAGTC
CGAGCACCGCCCAGCCGCCCGCGCATGGCTTACAAGGCGGCCTCTACGGCGCTGCTGTCCCTTCTCGCCGCCGCG
CAGGACTCATCGTTGCTGCTCGTGGTCGCCTTGGCCCTCGGTTCCGTGGGAGATGCCTTTCTTGCCTGGCCCGGA
GACGTGGCCTTTCTTCGCGGACTGGGGTCCTTTCTGGCCGCTCACGTCCTCTACAGCGCCCTCTTGTGGCGCGTG
GGCGGAGGCGTCACCGCTCTCGGTGCTGAAAGTTGGCGGAGTGTGATGTCTGCGCTTGCGGTGGTCTCGGCGCCG
GCCATGATGTTGGCGCTGGTACCCAAGGTCGGTCCGTCGTTGCGCTTCCCCATCGCCCTCTACTGCACTGTCATC
CTTTGCATGCTTCTCGGAGCCGTGACGGTGCCTGGCCAGCAGGTTGCCGCTGGTGCCGTCTTGTTCGCCTCGTCG
GATTCACTGCTGGCGGCGGATGAGTTTCTCGTCGACGCCCAGTCAGAGCACCGAGCTTGGATGCAAAATGCAGTC
TGGATCTTGTACTACCTCGGCCAACTGCTCATCGTGACTGGATTCCGGTGA
Gene >Ophun1|3171
ATGGAAGCGTCATTGCTGGAGAAGAGCCTGCTCTTGTGCTCCTTCGCCTCGGCCCTTGTCTACGGTCTGCTAGTC
CGAGCACCGCCCAGCCGCCCGCGCATGGCTTACAAGGCGGCCTCTACGGCGCTGCTGTCCCTTCTCGCCGCCGCG
CAGGACTCATCGTTGCTGCTCGTGGTCGCCTTGGCCCTCGGTTCCGTGGGAGATGCCTTTCTTGCCTGGCCCGGA
GACGTGGCCTTTCTTCGCGGACTGGGGTCCTTTCTGGCCGCTCACGTCCTCTACAGCGCCCTCTTGTGGCGCGTG
GGCGGAGGCGTCACCGCTCTCGGTGCTGAAAGTTGGCGGAGTGTGATGTCTGCGCTTGCGGTGGTCTCGGCGCCG
GCCATGATGTTGGCGCTGGTACCCAAGGTCGGTCCGTCGTTGCGCTTCCCCATCGCCCTCTACTGCACTGTCATC
CTTTGCATGCTTCTCGGAGCCGTGACGGTGCCTGGCCAGCAGGTTGCCGCTGGTGCCGTCTTGTTCGCCTCGTCG
GATTCACTGCTGGCGGCGGATGAGTTTCTCGTCGACGCCCAGTCAGAGCACCGAGCTTGGATGCAAAATGCAGTC
TGGATCTTGTACTACCTCGGCCAACTGCTCATCGTGACTGGATTCCGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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