© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|316 |
| Gene name | |
| Location | Contig_1086:1838..3422 |
| Strand | - |
| Gene length (bp) | 1584 |
| Transcript length (bp) | 1533 |
| Coding sequence length (bp) | 1533 |
| Protein length (aa) | 511 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14555 | UBA_4 | UBA-like domain | 1.1E-12 | 13 | 53 |
| PF00789 | UBX | UBX domain | 5.8E-08 | 398 | 491 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74498|UCP10_SCHPO | UBX domain-containing protein 10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ucp10 PE=3 SV=1 | 161 | 490 | 1.0E-47 |
| sp|Q6GQ69|FAF2B_XENLA | FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1 | 8 | 468 | 9.0E-29 |
| sp|Q12229|UBX3_YEAST | UBX domain-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX3 PE=1 SV=1 | 173 | 490 | 2.0E-27 |
| sp|Q28BP9|FAF2_XENTR | FAS-associated factor 2 OS=Xenopus tropicalis GN=faf2 PE=2 SV=1 | 7 | 468 | 4.0E-23 |
| sp|Q96CS3|FAF2_HUMAN | FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2 | 8 | 465 | 3.0E-22 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74498|UCP10_SCHPO | UBX domain-containing protein 10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ucp10 PE=3 SV=1 | 161 | 490 | 1.0E-47 |
| sp|Q6GQ69|FAF2B_XENLA | FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1 | 8 | 468 | 9.0E-29 |
| sp|Q12229|UBX3_YEAST | UBX domain-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX3 PE=1 SV=1 | 173 | 490 | 2.0E-27 |
| sp|Q28BP9|FAF2_XENTR | FAS-associated factor 2 OS=Xenopus tropicalis GN=faf2 PE=2 SV=1 | 7 | 468 | 4.0E-23 |
| sp|Q96CS3|FAF2_HUMAN | FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2 | 8 | 465 | 3.0E-22 |
| sp|Q6AZH6|FAF2A_XENLA | FAS-associated factor 2-A OS=Xenopus laevis GN=faf2-a PE=2 SV=1 | 7 | 468 | 8.0E-22 |
| sp|Q9M0N1|PUX10_ARATH | Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana GN=PUX10 PE=2 SV=1 | 25 | 469 | 8.0E-22 |
| sp|Q2HJD0|FAF2_BOVIN | FAS-associated factor 2 OS=Bos taurus GN=FAF2 PE=2 SV=1 | 8 | 465 | 2.0E-21 |
| sp|Q3TDN2|FAF2_MOUSE | FAS-associated factor 2 OS=Mus musculus GN=Faf2 PE=1 SV=2 | 8 | 465 | 6.0E-20 |
| sp|Q5BK32|FAF2_RAT | FAS-associated factor 2 OS=Rattus norvegicus GN=Faf2 PE=2 SV=1 | 173 | 465 | 4.0E-18 |
| sp|Q04228|UBX2_YEAST | UBX domain-containing protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX2 PE=1 SV=1 | 3 | 438 | 6.0E-11 |
| sp|P54731|FAF1_MOUSE | FAS-associated factor 1 OS=Mus musculus GN=Faf1 PE=1 SV=2 | 168 | 466 | 3.0E-06 |
| sp|Q9UNN5|FAF1_HUMAN | FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE=1 SV=2 | 168 | 466 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|316 MADGDGQLSPSQQQALQQYVQVTNQDADAARSLLQRSQWNVEIAVAKFFDGEGPDLVAEAMAAQRAPPRHENLQE SLLEAAAASGSRRTRRDRTDPAPRIVPPQPVTHRTPWLLGLLLAPFSWGCRATSALVRTCYYLFSFLPAAIRPRA VTAGLTSSRGRRMLLPRDTAARFKREFDEEYGPNELPFFEGGLAQAHDLAKKDVKFLLMLLMSPEHDDTASFVRE TLLSADVVDFVRNPANGIILWGGNVLDSEAYQAATEYNCTKFPFSALVCLTPKEGSARMGVVKRVTGPVPAGAYL SELQGAMEKYGADLESVRAERTAQEVARTLRTEQDSAYERSLAIDRERAREKREAAAAAAEADRREREEAEAAAA KEQKRRQWRAWRASRVGPEPAAEEKKVVRIALKMPEASGAGRIVRRFAHDSSVEELYAFVDCYGVRPDGAAEPPD MYEHEYGFRIVSTLPRVVYEPSMTMTLGESIGKSGNLIVEETRAEEEEEEEKGEKGQEPR* |
| Coding | >Ophun1|316 ATGGCCGACGGCGACGGCCAACTGTCCCCCAGCCAGCAGCAGGCTCTCCAGCAATACGTCCAGGTCACCAACCAA GACGCAGACGCTGCCCGTTCGCTGCTCCAGCGGTCTCAATGGAACGTCGAGATCGCCGTGGCCAAATTCTTCGAC GGGGAAGGTCCCGATCTGGTGGCCGAGGCCATGGCCGCCCAGCGCGCGCCTCCGCGACACGAAAATCTTCAAGAG AGCCTCCTCGAAGCTGCCGCAGCCTCTGGCTCGAGACGAACGCGCAGAGATCGCACCGACCCGGCCCCCCGGATC GTGCCGCCGCAGCCCGTCACGCACCGCACGCCCTGGCTGCTGGGCCTCCTGTTGGCACCCTTTAGCTGGGGCTGT CGAGCGACGTCGGCCCTCGTACGCACATGCTACTACCTCTTCTCCTTTCTACCCGCCGCCATACGACCACGCGCC GTCACGGCCGGCTTGACAAGTTCAAGGGGCCGGCGCATGCTGCTCCCCCGCGATACAGCCGCCAGGTTTAAGCGC GAGTTTGACGAAGAGTATGGGCCCAACGAGCTACCGTTCTTCGAGGGCGGGCTGGCTCAGGCGCATGATTTGGCC AAAAAGGACGTCAAGTTCTTGCTGATGCTTCTCATGTCGCCCGAACACGACGACACAGCCTCCTTTGTGCGCGAG ACGCTGCTGAGCGCCGACGTGGTCGATTTCGTCCGAAACCCGGCCAACGGCATCATCCTCTGGGGCGGCAACGTT CTCGACTCGGAAGCCTACCAGGCGGCGACCGAGTACAACTGTACCAAGTTTCCCTTTTCGGCCCTCGTGTGCCTG ACCCCCAAGGAGGGCAGCGCTCGGATGGGCGTCGTCAAGCGGGTGACGGGCCCGGTGCCGGCGGGCGCGTATCTG TCGGAGCTGCAGGGCGCCATGGAAAAGTACGGTGCCGACTTGGAGAGCGTGAGGGCAGAGCGGACAGCGCAAGAG GTGGCGCGCACGCTGCGCACCGAGCAGGATTCGGCATACGAGCGGTCACTGGCCATCGATCGCGAGCGGGCGCGC GAGAAGAGAGAGGCGGCGGCGGCGGCTGCCGAGGCAGACAGGAGGGAGCGCGAGGAGGCCGAAGCGGCGGCTGCG AAAGAGCAGAAGCGACGGCAGTGGAGGGCGTGGCGGGCCTCCCGGGTCGGGCCAGAGCCAGCGGCGGAGGAGAAG AAGGTGGTGAGGATCGCGCTCAAGATGCCGGAAGCCTCGGGCGCAGGCCGAATCGTGAGGCGGTTCGCGCACGAC TCGTCGGTCGAGGAACTATACGCCTTTGTCGACTGCTACGGCGTGAGACCGGACGGGGCAGCGGAGCCGCCAGAC ATGTACGAGCACGAATACGGGTTCCGGATCGTGTCGACTCTGCCACGGGTGGTTTACGAGCCGAGCATGACGATG ACGTTGGGGGAGAGCATCGGCAAGTCAGGGAACCTGATAGTGGAGGAGACGAGGGCGGAGGAGGAGGAGGAGGAG GAGAAGGGAGAAAAGGGGCAAGAGCCGAGGTAG |
| Transcript | >Ophun1|316 ATGGCCGACGGCGACGGCCAACTGTCCCCCAGCCAGCAGCAGGCTCTCCAGCAATACGTCCAGGTCACCAACCAA GACGCAGACGCTGCCCGTTCGCTGCTCCAGCGGTCTCAATGGAACGTCGAGATCGCCGTGGCCAAATTCTTCGAC GGGGAAGGTCCCGATCTGGTGGCCGAGGCCATGGCCGCCCAGCGCGCGCCTCCGCGACACGAAAATCTTCAAGAG AGCCTCCTCGAAGCTGCCGCAGCCTCTGGCTCGAGACGAACGCGCAGAGATCGCACCGACCCGGCCCCCCGGATC GTGCCGCCGCAGCCCGTCACGCACCGCACGCCCTGGCTGCTGGGCCTCCTGTTGGCACCCTTTAGCTGGGGCTGT CGAGCGACGTCGGCCCTCGTACGCACATGCTACTACCTCTTCTCCTTTCTACCCGCCGCCATACGACCACGCGCC GTCACGGCCGGCTTGACAAGTTCAAGGGGCCGGCGCATGCTGCTCCCCCGCGATACAGCCGCCAGGTTTAAGCGC GAGTTTGACGAAGAGTATGGGCCCAACGAGCTACCGTTCTTCGAGGGCGGGCTGGCTCAGGCGCATGATTTGGCC AAAAAGGACGTCAAGTTCTTGCTGATGCTTCTCATGTCGCCCGAACACGACGACACAGCCTCCTTTGTGCGCGAG ACGCTGCTGAGCGCCGACGTGGTCGATTTCGTCCGAAACCCGGCCAACGGCATCATCCTCTGGGGCGGCAACGTT CTCGACTCGGAAGCCTACCAGGCGGCGACCGAGTACAACTGTACCAAGTTTCCCTTTTCGGCCCTCGTGTGCCTG ACCCCCAAGGAGGGCAGCGCTCGGATGGGCGTCGTCAAGCGGGTGACGGGCCCGGTGCCGGCGGGCGCGTATCTG TCGGAGCTGCAGGGCGCCATGGAAAAGTACGGTGCCGACTTGGAGAGCGTGAGGGCAGAGCGGACAGCGCAAGAG GTGGCGCGCACGCTGCGCACCGAGCAGGATTCGGCATACGAGCGGTCACTGGCCATCGATCGCGAGCGGGCGCGC GAGAAGAGAGAGGCGGCGGCGGCGGCTGCCGAGGCAGACAGGAGGGAGCGCGAGGAGGCCGAAGCGGCGGCTGCG AAAGAGCAGAAGCGACGGCAGTGGAGGGCGTGGCGGGCCTCCCGGGTCGGGCCAGAGCCAGCGGCGGAGGAGAAG AAGGTGGTGAGGATCGCGCTCAAGATGCCGGAAGCCTCGGGCGCAGGCCGAATCGTGAGGCGGTTCGCGCACGAC TCGTCGGTCGAGGAACTATACGCCTTTGTCGACTGCTACGGCGTGAGACCGGACGGGGCAGCGGAGCCGCCAGAC ATGTACGAGCACGAATACGGGTTCCGGATCGTGTCGACTCTGCCACGGGTGGTTTACGAGCCGAGCATGACGATG ACGTTGGGGGAGAGCATCGGCAAGTCAGGGAACCTGATAGTGGAGGAGACGAGGGCGGAGGAGGAGGAGGAGGAG GAGAAGGGAGAAAAGGGGCAAGAGCCGAGGTAG |
| Gene | >Ophun1|316 ATGGCCGACGGCGACGGCCAACTGTCCCCCAGCCAGCAGCAGGCTCTCCAGCAATACGTCCAGGTCACCAACCAA GACGCAGACGCTGCCCGTTCGCTGCTCCAGCGGTCTCAATGGAACGTCGAGGTAGATTCTGACCTTTTCGATGTC CCGGCTACCTGTAGCTGATTTTCCTAGATCGCCGTGGCCAAATTCTTCGACGGGGAAGGTCCCGATCTGGTGGCC GAGGCCATGGCCGCCCAGCGCGCGCCTCCGCGACACGAAAATCTTCAAGAGAGCCTCCTCGAAGCTGCCGCAGCC TCTGGCTCGAGACGAACGCGCAGAGATCGCACCGACCCGGCCCCCCGGATCGTGCCGCCGCAGCCCGTCACGCAC CGCACGCCCTGGCTGCTGGGCCTCCTGTTGGCACCCTTTAGCTGGGGCTGTCGAGCGACGTCGGCCCTCGTACGC ACATGCTACTACCTCTTCTCCTTTCTACCCGCCGCCATACGACCACGCGCCGTCACGGCCGGCTTGACAAGTTCA AGGGGCCGGCGCATGCTGCTCCCCCGCGATACAGCCGCCAGGTTTAAGCGCGAGTTTGACGAAGAGTATGGGCCC AACGAGCTACCGTTCTTCGAGGGCGGGCTGGCTCAGGCGCATGATTTGGCCAAAAAGGACGTCAAGTTCTTGCTG ATGCTTCTCATGTCGCCCGAACACGACGACACAGCCTCCTTTGTGCGCGAGACGCTGCTGAGCGCCGACGTGGTC GATTTCGTCCGAAACCCGGCCAACGGCATCATCCTCTGGGGCGGCAACGTTCTCGACTCGGAAGCCTACCAGGCG GCGACCGAGTACAACTGTACCAAGTTTCCCTTTTCGGCCCTCGTGTGCCTGACCCCCAAGGAGGGCAGCGCTCGG ATGGGCGTCGTCAAGCGGGTGACGGGCCCGGTGCCGGCGGGCGCGTATCTGTCGGAGCTGCAGGGCGCCATGGAA AAGTACGGTGCCGACTTGGAGAGCGTGAGGGCAGAGCGGACAGCGCAAGAGGTGGCGCGCACGCTGCGCACCGAG CAGGATTCGGCATACGAGCGGTCACTGGCCATCGATCGCGAGCGGGCGCGCGAGAAGAGAGAGGCGGCGGCGGCG GCTGCCGAGGCAGACAGGAGGGAGCGCGAGGAGGCCGAAGCGGCGGCTGCGAAAGAGCAGAAGCGACGGCAGTGG AGGGCGTGGCGGGCCTCCCGGGTCGGGCCAGAGCCAGCGGCGGAGGAGAAGAAGGTGGTGAGGATCGCGCTCAAG ATGCCGGAAGCCTCGGGCGCAGGCCGAATCGTGAGGCGGTTCGCGCACGACTCGTCGGTCGAGGAACTATACGCC TTTGTCGACTGCTACGGCGTGAGACCGGACGGGGCAGCGGAGCCGCCAGACATGTACGAGCACGAATACGGGTTC CGGATCGTGTCGACTCTGCCACGGGTGGTTTACGAGCCGAGCATGACGATGACGTTGGGGGAGAGCATCGGCAAG TCAGGGAACCTGATAGTGGAGGAGACGAGGGCGGAGGAGGAGGAGGAGGAGGAGAAGGGAGAAAAGGGGCAAGAG CCGAGGTAG |