Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3152
Gene name
LocationContig_280:7541..8466
Strand-
Gene length (bp)925
Transcript length (bp)879
Coding sequence length (bp)879
Protein length (aa) 293

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01793 Glyco_transf_15 Glycolipid 2-alpha-mannosyltransferase 6.3E-09 57 141

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O94565|OMH4_SCHPO O-glycoside alpha-1,2-mannosyltransferase homolog 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=omh4 PE=3 SV=2 58 192 9.0E-07

GO

GO Term Description Terminal node
GO:0006486 protein glycosylation Yes
GO:0000030 mannosyltransferase activity Yes
GO:0016020 membrane Yes
GO:0043413 macromolecule glycosylation No
GO:0006807 nitrogen compound metabolic process No
GO:0044238 primary metabolic process No
GO:0003824 catalytic activity No
GO:0008152 metabolic process No
GO:0070085 glycosylation No
GO:0016740 transferase activity No
GO:0043170 macromolecule metabolic process No
GO:0019538 protein metabolic process No
GO:0043412 macromolecule modification No
GO:0110165 cellular anatomical entity No
GO:0036211 protein modification process No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:1901564 organonitrogen compound metabolic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No
GO:0016758 hexosyltransferase activity No
GO:0016757 glycosyltransferase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3152
MPLLLRWRQPSWLRWRLLLGIALLVIFDVWMHRRRLAMARPASNLYSPFHVGFQEQPFLNDQPWESDFVAAATEA
LAEDGSGATASLETISPEMCGYPDWIDRSKARSRMLAFQRQGVRYAGDEIHHHKRRSQSGFSYTHAPFVEMNRHR
NRHDYAMALWRDEATAPSLFHKLSRYKTERRLPGSALWTAMMSPTLSPLGYVHDTLHKLVPTVHGQLDEPDRGSW
DVVAAVPTGPGRYGEPASTASHQEDRHMSQSQFERGDNVIVEAFRLVSAGLEARGGLAGFIQGSPFH*
Coding >Ophun1|3152
ATGCCCCTTTTGCTGCGTTGGCGGCAGCCCTCGTGGCTTCGCTGGCGACTGCTGCTCGGCATAGCGCTTCTCGTC
ATCTTCGACGTCTGGATGCACCGTCGCCGTCTAGCCATGGCGAGACCGGCTTCAAACCTCTATTCTCCTTTTCAC
GTCGGCTTTCAGGAGCAGCCGTTCCTCAATGATCAGCCCTGGGAGTCGGACTTTGTGGCGGCTGCGACTGAGGCT
CTGGCTGAGGATGGGAGCGGCGCAACGGCAAGCCTCGAGACGATATCCCCGGAGATGTGCGGGTATCCGGACTGG
ATTGACAGGAGCAAGGCCCGGAGCCGAATGCTTGCTTTTCAGAGACAGGGAGTTCGGTATGCCGGTGACGAGATC
CATCATCACAAGCGCCGCTCCCAGTCGGGCTTCTCCTACACACACGCTCCCTTTGTCGAGATGAATCGTCACCGC
AATCGTCACGACTACGCCATGGCCCTCTGGAGGGACGAGGCGACGGCACCGTCTCTCTTCCACAAGCTATCGCGC
TACAAGACGGAGAGGCGACTCCCCGGCTCGGCGCTGTGGACGGCAATGATGAGCCCAACCCTTTCTCCCCTGGGC
TACGTCCACGACACGCTTCACAAGCTGGTGCCGACGGTGCACGGCCAGCTGGATGAGCCGGATCGCGGGAGCTGG
GACGTCGTTGCAGCTGTGCCAACGGGGCCAGGACGATACGGCGAACCTGCTTCGACCGCATCACATCAAGAGGAC
CGTCATATGAGTCAGTCGCAGTTCGAGAGGGGTGACAATGTTATCGTCGAGGCGTTTCGTCTTGTGTCTGCGGGT
TTGGAGGCGCGCGGCGGGCTGGCCGGGTTCATCCAGGGTTCTCCCTTCCACTGA
Transcript >Ophun1|3152
ATGCCCCTTTTGCTGCGTTGGCGGCAGCCCTCGTGGCTTCGCTGGCGACTGCTGCTCGGCATAGCGCTTCTCGTC
ATCTTCGACGTCTGGATGCACCGTCGCCGTCTAGCCATGGCGAGACCGGCTTCAAACCTCTATTCTCCTTTTCAC
GTCGGCTTTCAGGAGCAGCCGTTCCTCAATGATCAGCCCTGGGAGTCGGACTTTGTGGCGGCTGCGACTGAGGCT
CTGGCTGAGGATGGGAGCGGCGCAACGGCAAGCCTCGAGACGATATCCCCGGAGATGTGCGGGTATCCGGACTGG
ATTGACAGGAGCAAGGCCCGGAGCCGAATGCTTGCTTTTCAGAGACAGGGAGTTCGGTATGCCGGTGACGAGATC
CATCATCACAAGCGCCGCTCCCAGTCGGGCTTCTCCTACACACACGCTCCCTTTGTCGAGATGAATCGTCACCGC
AATCGTCACGACTACGCCATGGCCCTCTGGAGGGACGAGGCGACGGCACCGTCTCTCTTCCACAAGCTATCGCGC
TACAAGACGGAGAGGCGACTCCCCGGCTCGGCGCTGTGGACGGCAATGATGAGCCCAACCCTTTCTCCCCTGGGC
TACGTCCACGACACGCTTCACAAGCTGGTGCCGACGGTGCACGGCCAGCTGGATGAGCCGGATCGCGGGAGCTGG
GACGTCGTTGCAGCTGTGCCAACGGGGCCAGGACGATACGGCGAACCTGCTTCGACCGCATCACATCAAGAGGAC
CGTCATATGAGTCAGTCGCAGTTCGAGAGGGGTGACAATGTTATCGTCGAGGCGTTTCGTCTTGTGTCTGCGGGT
TTGGAGGCGCGCGGCGGGCTGGCCGGGTTCATCCAGGGTTCTCCCTTCCACTGA
Gene >Ophun1|3152
ATGCCCCTTTTGCTGCGTTGGCGGCAGCCCTCGTGGCTTCGCTGGCGACTGCTGCTCGGCATAGCGCTTCTCGTC
ATCTTCGACGTCTGGATGCACCGTCGCCGTCTAGCCATGGCGAGACCGGCTTCAAACCTCTATTCTCCTTTTCAC
GTCGGCTTTCAGGAGCAGCCGTTCCTCAATGATCAGCCCTGGGAGTCGGACTTTGTGGCGGCTGCGACTGAGGCT
CTGGCTGAGGATGGGAGCGGCGCAACGGCAAGCCTCGAGACGATATCCCCGGAGATGTGCGGGTATCCGGACTGG
ATTGACAGGAGCAAGGCCCGGAGCCGAATGCTTGCTTTTCAGAGACAGGGAGTTCGGTATGCCGGTGACGAGATC
CATCATCACAAGCGCCGCTCCCAGTCGGGCTTCTCCTACACACACGCTCCCTTTGTCGAGATGAATCGTCACCGC
AATCGTCACGACTACGCCATGGCCCTCTGGAGGGACGAGGCGACGGCACCGTCTCTCTTCCACAAGCTATCGCGC
TACAAGACGGAGAGGCGACTCCCCGGCTCGGCGCTGTGGACGGCAATGATGAGCCCAACCCTTTCTCCCCTGGGC
TACGTCCACGACACGCTTCAGTATGGTCCGTACGGCTCGACGGATGAGTCGCTGAGTCGAGGCAAGCAAGCTGGT
GCCGACGGTGCACGGCCAGCTGGATGAGCCGGATCGCGGGAGCTGGGACGTCGTTGCAGCTGTGCCAACGGGGCC
AGGACGATACGGCGAACCTGCTTCGACCGCATCACATCAAGAGGACCGTCATATGAGTCAGTCGCAGTTCGAGAG
GGGTGACAATGTTATCGTCGAGGCGTTTCGTCTTGTGTCTGCGGGTTTGGAGGCGCGCGGCGGGCTGGCCGGGTT
CATCCAGGGTTCTCCCTTCCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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