Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3150
Gene name
LocationContig_28:53897..56178
Strand+
Gene length (bp)2281
Transcript length (bp)1638
Coding sequence length (bp)1638
Protein length (aa) 546

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06087 Tyr-DNA_phospho Tyrosyl-DNA phosphodiesterase 9.0E-88 119 534

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q4G056|TYDP1_RAT Tyrosyl-DNA phosphodiesterase 1 OS=Rattus norvegicus GN=Tdp1 PE=1 SV=1 134 543 3.0E-13
sp|Q9NUW8|TYDP1_HUMAN Tyrosyl-DNA phosphodiesterase 1 OS=Homo sapiens GN=TDP1 PE=1 SV=2 134 543 2.0E-12
sp|Q8BJ37|TYDP1_MOUSE Tyrosyl-DNA phosphodiesterase 1 OS=Mus musculus GN=Tdp1 PE=1 SV=2 134 543 7.0E-12
sp|Q8H1D9|TYDP1_ARATH Tyrosyl-DNA phosphodiesterase 1 OS=Arabidopsis thaliana GN=TDP1 PE=1 SV=1 76 543 9.0E-12

GO

GO Term Description Terminal node
GO:0005634 nucleus Yes
GO:0006281 DNA repair Yes
GO:0008081 phosphoric diester hydrolase activity Yes
GO:0044260 cellular macromolecule metabolic process No
GO:0051716 cellular response to stimulus No
GO:0043170 macromolecule metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0050896 response to stimulus No
GO:0006259 DNA metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:0003824 catalytic activity No
GO:0043227 membrane-bounded organelle No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0044238 primary metabolic process No
GO:0044237 cellular metabolic process No
GO:0006974 cellular response to DNA damage stimulus No
GO:0006950 response to stress No
GO:0043231 intracellular membrane-bounded organelle No
GO:0042578 phosphoric ester hydrolase activity No
GO:0071704 organic substance metabolic process No
GO:0016787 hydrolase activity No
GO:1901360 organic cyclic compound metabolic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0043229 intracellular organelle No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0033554 cellular response to stress No
GO:0110165 cellular anatomical entity No
GO:0043226 organelle No
GO:0006807 nitrogen compound metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5011
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3284
Ophiocordyceps australis map64 (Brazil) OphauB2|2781
Ophiocordyceps camponoti-floridani Ophcf2|06051
Ophiocordyceps camponoti-rufipedis Ophun1|3150 (this protein)
Ophiocordyceps kimflemingae Ophio5|2524
Ophiocordyceps subramaniannii Hirsu2|2451

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3150
MAEDTPDAQVGNDDSDDEALRLAIAMSLQEASTASTPTPAVVAAVAPAAASAAPAPPQSGTLLALDRKKMEEERL
ARLAKKRPRAQDDAVGLLPPSKKPTSTPDSKSGDAILPYPHGVVKRTWARGYPRTADDIKIEEVLQRDQLLLALL
SSYQWDEDWLLSKVDVATTKLLLVAYAADDRQKQVMRANAPPHLKFCFPPMHGPGSMHSKLQVLKFPRYLRLVVP
TGNLVPYDWGETGVMENMVFLIDLPRLQNVADHKSTPFSRSLDLFLRTMGVESKMIDSLTSYDFSKTADLGFVYT
SPGGHMDESLNRVGYCGLGAAVTTLGLATTEPIEVDMAACSASLGYLKCGFVEALYNACQGDDGMREYGQRPTRK
ADDKQRRPRHWQQLKDRIRIYFPTNQTVSDSRGGKAAAGTICVQARWWRSPDFPVELMRDCVNTREGLLMHTKVM
FVRRSSVGSGRPAWAYVGSANLSESAWGRLVKDKQSGKAKMSCRNWECGVVVPVADAATATAADLGVFQGTVPLP
MKLPGRAYGPAEEPWFFDGA*
Coding >Ophun1|3150
ATGGCCGAAGACACCCCCGACGCCCAAGTGGGAAACGACGACTCCGATGACGAGGCCCTCCGTCTGGCCATCGCC
ATGTCTCTACAGGAGGCTTCGACCGCCAGCACCCCAACTCCAGCAGTGGTAGCAGCAGTAGCACCAGCAGCAGCA
TCAGCAGCACCGGCCCCACCGCAGAGTGGGACGCTGCTCGCTCTCGACCGCAAGAAGATGGAGGAGGAGCGGCTG
GCCAGGCTGGCCAAGAAACGCCCTCGTGCCCAAGACGACGCTGTCGGGCTGCTGCCGCCAAGCAAGAAGCCCACG
TCCACCCCCGACAGCAAAAGCGGAGACGCCATTCTCCCCTACCCCCATGGCGTCGTCAAGCGCACCTGGGCGCGT
GGCTATCCACGCACCGCAGACGACATCAAGATCGAAGAGGTGCTGCAGAGGGATCAGCTGCTGCTCGCCCTGCTC
TCGTCTTATCAGTGGGACGAGGACTGGCTGCTGTCCAAGGTGGATGTGGCGACGACTAAGCTTCTTCTGGTCGCG
TACGCGGCAGATGATCGACAGAAACAAGTGATGCGGGCCAATGCACCGCCGCACCTTAAGTTTTGCTTCCCGCCG
ATGCATGGTCCTGGGTCTATGCATTCCAAGCTCCAGGTGCTCAAGTTCCCTCGCTACCTGCGCCTTGTAGTGCCC
ACAGGAAACCTTGTGCCCTACGACTGGGGCGAGACGGGTGTCATGGAGAACATGGTCTTTCTCATCGATCTGCCT
CGTCTGCAGAATGTGGCGGATCACAAGTCGACCCCGTTCAGTCGCAGCCTCGATCTCTTTCTCCGAACCATGGGC
GTCGAGAGCAAGATGATTGACAGCCTGACGAGCTACGACTTTTCCAAGACGGCCGATCTGGGCTTTGTGTATACC
AGTCCCGGGGGACACATGGACGAGTCGCTCAATCGAGTCGGGTACTGCGGCTTGGGCGCCGCCGTAACGACGCTT
GGCCTGGCAACGACGGAGCCCATCGAAGTCGACATGGCGGCATGTAGCGCCAGTCTCGGATACCTCAAATGCGGC
TTTGTCGAGGCCCTGTACAACGCCTGTCAAGGCGATGACGGCATGAGAGAGTACGGTCAACGACCAACTCGTAAG
GCCGACGACAAGCAACGGCGGCCACGGCATTGGCAGCAGCTGAAGGACCGAATCCGCATCTACTTTCCGACAAAT
CAGACCGTGTCCGACAGCCGGGGCGGCAAGGCGGCTGCGGGCACCATTTGCGTGCAGGCAAGGTGGTGGCGGTCG
CCAGATTTCCCCGTCGAGCTGATGCGCGACTGTGTCAACACGAGGGAGGGGCTCCTGATGCACACCAAGGTCATG
TTCGTGCGCCGAAGCAGTGTCGGGAGCGGGCGGCCGGCCTGGGCGTATGTGGGGAGCGCCAACCTGTCCGAAAGC
GCCTGGGGACGGCTAGTCAAGGACAAGCAGTCGGGCAAGGCCAAGATGAGCTGCCGCAACTGGGAGTGCGGCGTC
GTGGTGCCGGTGGCCGACGCGGCGACGGCGACGGCGGCCGACCTGGGCGTCTTCCAGGGCACTGTGCCGCTCCCC
ATGAAGCTGCCGGGTCGAGCATACGGGCCGGCCGAGGAACCTTGGTTCTTTGACGGCGCCTGA
Transcript >Ophun1|3150
ATGGCCGAAGACACCCCCGACGCCCAAGTGGGAAACGACGACTCCGATGACGAGGCCCTCCGTCTGGCCATCGCC
ATGTCTCTACAGGAGGCTTCGACCGCCAGCACCCCAACTCCAGCAGTGGTAGCAGCAGTAGCACCAGCAGCAGCA
TCAGCAGCACCGGCCCCACCGCAGAGTGGGACGCTGCTCGCTCTCGACCGCAAGAAGATGGAGGAGGAGCGGCTG
GCCAGGCTGGCCAAGAAACGCCCTCGTGCCCAAGACGACGCTGTCGGGCTGCTGCCGCCAAGCAAGAAGCCCACG
TCCACCCCCGACAGCAAAAGCGGAGACGCCATTCTCCCCTACCCCCATGGCGTCGTCAAGCGCACCTGGGCGCGT
GGCTATCCACGCACCGCAGACGACATCAAGATCGAAGAGGTGCTGCAGAGGGATCAGCTGCTGCTCGCCCTGCTC
TCGTCTTATCAGTGGGACGAGGACTGGCTGCTGTCCAAGGTGGATGTGGCGACGACTAAGCTTCTTCTGGTCGCG
TACGCGGCAGATGATCGACAGAAACAAGTGATGCGGGCCAATGCACCGCCGCACCTTAAGTTTTGCTTCCCGCCG
ATGCATGGTCCTGGGTCTATGCATTCCAAGCTCCAGGTGCTCAAGTTCCCTCGCTACCTGCGCCTTGTAGTGCCC
ACAGGAAACCTTGTGCCCTACGACTGGGGCGAGACGGGTGTCATGGAGAACATGGTCTTTCTCATCGATCTGCCT
CGTCTGCAGAATGTGGCGGATCACAAGTCGACCCCGTTCAGTCGCAGCCTCGATCTCTTTCTCCGAACCATGGGC
GTCGAGAGCAAGATGATTGACAGCCTGACGAGCTACGACTTTTCCAAGACGGCCGATCTGGGCTTTGTGTATACC
AGTCCCGGGGGACACATGGACGAGTCGCTCAATCGAGTCGGGTACTGCGGCTTGGGCGCCGCCGTAACGACGCTT
GGCCTGGCAACGACGGAGCCCATCGAAGTCGACATGGCGGCATGTAGCGCCAGTCTCGGATACCTCAAATGCGGC
TTTGTCGAGGCCCTGTACAACGCCTGTCAAGGCGATGACGGCATGAGAGAGTACGGTCAACGACCAACTCGTAAG
GCCGACGACAAGCAACGGCGGCCACGGCATTGGCAGCAGCTGAAGGACCGAATCCGCATCTACTTTCCGACAAAT
CAGACCGTGTCCGACAGCCGGGGCGGCAAGGCGGCTGCGGGCACCATTTGCGTGCAGGCAAGGTGGTGGCGGTCG
CCAGATTTCCCCGTCGAGCTGATGCGCGACTGTGTCAACACGAGGGAGGGGCTCCTGATGCACACCAAGGTCATG
TTCGTGCGCCGAAGCAGTGTCGGGAGCGGGCGGCCGGCCTGGGCGTATGTGGGGAGCGCCAACCTGTCCGAAAGC
GCCTGGGGACGGCTAGTCAAGGACAAGCAGTCGGGCAAGGCCAAGATGAGCTGCCGCAACTGGGAGTGCGGCGTC
GTGGTGCCGGTGGCCGACGCGGCGACGGCGACGGCGGCCGACCTGGGCGTCTTCCAGGGCACTGTGCCGCTCCCC
ATGAAGCTGCCGGGTCGAGCATACGGGCCGGCCGAGGAACCTTGGTTCTTTGACGGCGCCTGA
Gene >Ophun1|3150
ATGGCCGAAGACACCCCCGACGCCCAAGTGGGAAACGACGACTCCGATGACGAGGCCCTCCGTCTGGCCATCGCC
ATGTCTCTACAGGAGGCTTCGACCGCCAGCACCCCAACTCCAGCAGTGGTAGCAGCAGTAGCACCAGCAGCAGCA
TCAGCAGCACCGGCCCCACCGCAGAGTGGGACGCTGCTCGCTCTCGACCGCAAGAAGATGGAGGAGGAGCGGCTG
GCCAGGCTGGCCAAGAAACGCCCTCGTGCCCAAGACGACGCTGTCGGGCTGCTGCCGCCAAGCAAGAAGCCCACG
TCCACCCCCGACAGCAAAAGCGGAGACGCCATTCTCCCCTACCCCCATGGCGTCGTCAAGCGCACCTGGGCGCGT
GGCTATCCACGCACCGCAGACGACATCAAGATCGAAGAGGTGCTGCAGAGGGATCAGCTGCTGCTCGCCCTGCTC
TCGTCTTATCAGTGGGACGAGGACTGGCTGCTGTCCAAGGTGGATGTGGCGACGACTAAGCTTCTTCTGGTCGCG
TACGCGGCAGATGATCGACAGGTAGGCCCGAGACGACCTCTCCGAGAGCCCTACGTGCTTGATCAAACTCTAAAC
AATCTCACGATGCGGCAGAAACAAGTGATGCGGGCCAATGCACCGCCGCACCTTAAGTTTTGCTTCCCGCCGATG
CATGGTCCTGGGTCTATGCATTCCAAGCTCCAGGTGCTCAAGTTCCCTCGCTACCTGCGCCTTGTAGTGCCCACA
GGAAACCTTGTGCCCTACGACTGGGGCGAGACGGGTGTCATGGAGAACGTCGGCAGGACCACCTTGAGGCGTGCC
ACGCAGCAAGGGCGCTGACTAGTCTCTGGTAGATGGTCTTTCTCATCGATCTGCCTCGTCTGCAGAATGTGGCGG
ATCACAAGTCGACCCCGTTCAGTCGCAGCCTCGATCTCTTTCTCCGAACCATGGGCGTCGAGAGCAAGATGATTG
ACAGCCTGACGAGCTACGACTTTTCCAAGACGGCCGATCTGGGCTTTGTGTATACCAGGTCCGTCTGTTGAGCCA
CGCAACTGGTCGGACCGAGCTCACGCGGGCCCCAGTCCCGGGGGACACATGGACGAGTCGCTCAATCGAGTCGGT
CAGTGCATTCACACATATGAATGCGCCATTTGCGGCTGACAGGCGGTCGTCAAGGGTACTGCGGCTTGGGCGCCG
CCGTAACGACGCTTGGCCTGGCAACGACGGAGCCCATCGAAGTCGACATGGCGGCATGTGTCACACATTCATCAC
TCACCTCTCTGTGCGGGGGGTGGAGGGAGGACTTGCGCTAACGCCGGGAATCAGAGCGCCAGTCTCGGATACCTC
AAATGCGGCTTTGTCGAGGCCCTGTACAACGCCTGTCAAGGTAAGTGGCCTCGGGGATCCGCCGCCGTTTTGGTG
CTGTCCACACATGCCCCATAGCCGCCCGCCCTCCCTTGGGGATGTTGGAGCCACGGAGGGCGTGGACGGTCATGG
ACGAGGCCGGGAGGGCGAGCTGGCTGGGGCGGGACCAGTCAGATGTTGCCTGACACGATGGCAGGCGATGACGGC
ATGAGAGAGTACGGTCAACGACCAACTCGTAAGGCCGACGACAAGCAACGGCGGCCACGGCATTGGCAGCAGCTG
AAGGACCGAATCCGCATCTACTTTCCGACAAATCAGACCGTGTCCGACAGCCGGGGCGGCAAGGCGGTAGGCGAC
CGGGATCGGGTCAGATGGCACGTTTATGGGCTAATATTTCGTTGCTGTGGCAGGCTGCGGGCACCATTTGCGTGC
AGGCAAGGTGGTGGCGGTCGCCAGATTTCCCCGTCGAGCTGATGCGCGACTGTGTCAACACGAGGGAGGGGCTCC
TGATGCACACCAAGGTCATGTTCGTGCGCCGAAGCAGTGTCGGGAGCGGGCGGCCGGCCTGGGCGTATGTGGGGA
GCGCCAACCTGTCCGAAAGCGCCTGGTGAGAAGCCCCAGTTATCCATACATACATATGTATGTACATACATATGA
GTGGGAGGCTCCGGAGGTGGGGAAATGCTGATGGACGAGGCGTGCCAGGGGACGGCTAGTCAAGGACAAGCAGTC
GGGCAAGGCCAAGATGAGCTGCCGCAACTGGGAGTGCGGCGTCGTGGTGCCGGTGGCCGACGCGGCGACGGCGAC
GGCGGCCGACCTGGGCGTCTTCCAGGGCACTGTGCCGCTCCCCATGAAGCTGCCGGGTCGAGCATACGGGCCGGC
CGAGGAACCTTGGTTCTTTGACGGCGCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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