Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|3074
Gene name
Location	Contig_272:22064..23305
Strand	+
Gene length (bp)	1241
Transcript length (bp)	1002
Coding sequence length (bp)	1002
Protein length (aa)	334

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00611	FCH	Fes/CIP4, and EFC/F-BAR homology domain	9.7E-07	22	94

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O43059\|SYP1_SCHPO	Cytoskeletal protein syp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=syp1 PE=1 SV=1	1	243	6.0E-13
sp\|P25623\|SYP1_YEAST	Suppressor of yeast profilin deletion OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SYP1 PE=1 SV=3	12	248	6.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|3074 MDDVVRAEYPGLLATMMPGQAVSTLNERVKRINRINMEIADWLQERRRVEEQYALGLRRLAQHRVPNTNSDLGVF HIPWMRILESVDRIAKSHHLFAERVEKDVEFPLRAYQQRRDYLNMHSISANLTVLARDLDDAQDKAERLNRRGAR ASSQKVEAANSRLESASQQWESQAPFVFETLQALDESRINQLRDLLTQYQTHEASQAQRAQDNAVEALAAMLEIS TDKEIKDFARRAAENKSSLPSQTLHSSHPNPVRSVTRRLSMATAAATAPLHRPLTATAAPPPPPAAAPTAFPTGA PAAAPMAATGTGSTAGTTQLAPPPATLFNADEA*
Coding	>Ophun1\|3074 ATGGATGACGTTGTCAGGGCCGAGTATCCCGGCCTGCTGGCCACCATGATGCCCGGTCAAGCTGTCTCGACCCTC AACGAACGGGTCAAGCGCATCAACAGGATCAACATGGAGATTGCCGACTGGCTTCAGGAGCGTCGTCGCGTCGAG GAGCAGTATGCTCTCGGCCTGCGCAGGCTCGCCCAGCACAGGGTCCCCAATACAAACTCAGATCTAGGAGTCTTC CACATCCCCTGGATGCGCATCCTAGAATCAGTCGATCGCATCGCAAAGTCGCACCACCTATTCGCCGAGCGTGTC GAAAAGGACGTCGAGTTTCCCTTGCGAGCCTACCAGCAGCGCCGCGACTACTTAAACATGCACAGCATATCCGCC AACCTCACCGTCTTGGCCAGAGACCTCGACGATGCCCAGGATAAGGCCGAGAGGCTCAACAGGAGGGGCGCCAGG GCGAGCTCCCAAAAGGTCGAAGCCGCCAACAGCAGGCTCGAATCGGCCTCGCAGCAATGGGAGTCGCAGGCACCT TTCGTCTTCGAGACTCTACAGGCCTTGGACGAGTCGCGCATCAACCAGCTCCGCGACCTCTTGACCCAATATCAG ACGCACGAGGCCTCGCAGGCCCAGCGCGCCCAGGACAACGCCGTCGAGGCCCTGGCCGCCATGCTCGAGATCAGC ACCGACAAGGAGATCAAGGACTTTGCGAGACGAGCCGCCGAAAACAAGTCGTCGCTGCCGTCGCAGACTCTTCAT TCATCCCATCCCAACCCTGTCCGTTCCGTCACGAGACGCCTGTCCATGGCCACGGCCGCCGCCACCGCGCCTCTT CACCGGCCTCTCACCGCGACTGCGGCGCCGCCACCGCCTCCGGCTGCCGCACCGACGGCCTTCCCGACTGGAGCG CCGGCTGCCGCACCGATGGCTGCCACGGGGACTGGCTCGACGGCTGGCACTACCCAGTTGGCGCCTCCGCCCGCG ACCCTTTTCAATGCCGACGAGGCCTGA
Transcript	>Ophun1\|3074 ATGGATGACGTTGTCAGGGCCGAGTATCCCGGCCTGCTGGCCACCATGATGCCCGGTCAAGCTGTCTCGACCCTC AACGAACGGGTCAAGCGCATCAACAGGATCAACATGGAGATTGCCGACTGGCTTCAGGAGCGTCGTCGCGTCGAG GAGCAGTATGCTCTCGGCCTGCGCAGGCTCGCCCAGCACAGGGTCCCCAATACAAACTCAGATCTAGGAGTCTTC CACATCCCCTGGATGCGCATCCTAGAATCAGTCGATCGCATCGCAAAGTCGCACCACCTATTCGCCGAGCGTGTC GAAAAGGACGTCGAGTTTCCCTTGCGAGCCTACCAGCAGCGCCGCGACTACTTAAACATGCACAGCATATCCGCC AACCTCACCGTCTTGGCCAGAGACCTCGACGATGCCCAGGATAAGGCCGAGAGGCTCAACAGGAGGGGCGCCAGG GCGAGCTCCCAAAAGGTCGAAGCCGCCAACAGCAGGCTCGAATCGGCCTCGCAGCAATGGGAGTCGCAGGCACCT TTCGTCTTCGAGACTCTACAGGCCTTGGACGAGTCGCGCATCAACCAGCTCCGCGACCTCTTGACCCAATATCAG ACGCACGAGGCCTCGCAGGCCCAGCGCGCCCAGGACAACGCCGTCGAGGCCCTGGCCGCCATGCTCGAGATCAGC ACCGACAAGGAGATCAAGGACTTTGCGAGACGAGCCGCCGAAAACAAGTCGTCGCTGCCGTCGCAGACTCTTCAT TCATCCCATCCCAACCCTGTCCGTTCCGTCACGAGACGCCTGTCCATGGCCACGGCCGCCGCCACCGCGCCTCTT CACCGGCCTCTCACCGCGACTGCGGCGCCGCCACCGCCTCCGGCTGCCGCACCGACGGCCTTCCCGACTGGAGCG CCGGCTGCCGCACCGATGGCTGCCACGGGGACTGGCTCGACGGCTGGCACTACCCAGTTGGCGCCTCCGCCCGCG ACCCTTTTCAATGCCGACGAGGCCTGA
Gene	>Ophun1\|3074 ATGGATGACGTTGTCAGGGCCGAGTATCCCGGCCTGCTGGTGAGGCTCAGCCTGCGACAGGACCTGCCTGATTGT TCGCTGACCGACCACTCAGGCCACCATGATGCCCGGTCAAGCTGTCTCGACCCTCAACGAACGGGTCAAGCGCAT CAACAGGATCAACATGGAGATTGCCGACTGGCTTCAGGTAGCTCATGGTCCACCACTTGAACCTCGCCCGGTGGC TGACTTGGACTACAGGAGCGTCGTCGCGTCGAGGAGCAGTATGCTCTCGGCCTGCGCAGGCTCGCCCAGCACAGG GTCCCCAATACAAACTCAGATCTAGGGTGCGATCGCCATCTTCTCCTTGGCAGAATTGCCTTTTGCTGACCGAAG CTCTCCAGAGTCTTCCACATCCCCTGGATGCGCATCCTAGAATCAGTCGATCGCATCGCAAAGTCGCACCACCTA TTCGCCGAGCGTGTCGAAAAGGACGTCGAGTTTCCCTTGCGAGCCTACCAGCAGCGCCGCGACTACTTAAACATG CACAGCATATCCGCCAACCTCACCGTCTTGGCCAGAGACCTCGACGATGCCCAGGATAAGGCCGAGAGGCTCAAC AGGAGGGGCGCCAGGGCGAGCTCCCAAAAGGTCGAAGCCGCCAACAGCAGGCTCGAATCGGCCTCGCAGCAATGG GAGTCGCAGGCACCTTTCGTCTTCGAGACTCTACAGGCCTTGGACGAGTCGCGCATCAACCAGCTCCGCGACCTC TTGACCCAATATCAGACGCACGAGGCCTCGCAGGCCCAGCGCGCCCAGGACAACGCCGTCGAGGCCCTGGCCGCC ATGCTCGAGATCAGCACCGACAAGGAGATCAAGGACTTTGCGAGACGAGCCGCCGAAAACAAGTCGTCGCTGCCG TCGCAGACTCTTCATTCATCCCATCCCAACCCTGTCCGTTCCGTCACGAGACGCCTGTCCATGGCCACGGCCGCC GCCACCGCGCCTCTTCACCGGCCTCTCACCGCGACTGCGGCGCCGCCACCGCCTCCGGCTGCCGCACCGACGGCC TTCCCGACTGGAGCGCCGGCTGCCGCACCGATGGCTGCCACGGGGACTGGCTCGACGGCTGGCACTACCCAGTTG GCGCCTCCGCCCGCGAGTCTGGCACCTACCGCCGAGGATGGCGTCAGCGATCACGATTCCTCAGCTCCGGCCGAC GCCAAGCCAGGTAAGCCCTTTTCAATGCCGACGAGGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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