Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3040
Gene name
LocationContig_27:41724..42069
Strand+
Gene length (bp)345
Transcript length (bp)297
Coding sequence length (bp)297
Protein length (aa) 99

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 52 71 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3040
MPAAASALIAGGRRLTLTSARTFHASTRLLLADAAPPPLPPRKPMGAFRGGLFGFLFGCVLSGGAVYSYAVQELK
ASSDLVTDDLYVCFRFLKACVKC*
Coding >Ophun1|3040
ATGCCCGCGGCCGCTTCAGCGCTCATTGCCGGCGGCCGCCGCCTCACGCTGACCTCCGCCCGCACCTTCCACGCC
TCCACCCGCCTCCTCCTCGCCGACGCCGCGCCGCCTCCACTACCGCCACGGAAGCCCATGGGAGCATTCCGCGGG
GGTCTCTTCGGATTCCTCTTCGGCTGCGTTCTGTCCGGCGGTGCCGTCTATAGCTATGCCGTTCAGGAGCTCAAG
GCCTCTAGCGATCTCGTCACCGACGACTTATACGTATGTTTTCGCTTTCTCAAGGCCTGCGTCAAGTGCTGA
Transcript >Ophun1|3040
ATGCCCGCGGCCGCTTCAGCGCTCATTGCCGGCGGCCGCCGCCTCACGCTGACCTCCGCCCGCACCTTCCACGCC
TCCACCCGCCTCCTCCTCGCCGACGCCGCGCCGCCTCCACTACCGCCACGGAAGCCCATGGGAGCATTCCGCGGG
GGTCTCTTCGGATTCCTCTTCGGCTGCGTTCTGTCCGGCGGTGCCGTCTATAGCTATGCCGTTCAGGAGCTCAAG
GCCTCTAGCGATCTCGTCACCGACGACTTATACGTATGTTTTCGCTTTCTCAAGGCCTGCGTCAAGTGCTGA
Gene >Ophun1|3040
ATGCCCGCGGCCGCTTCAGCGCTCATTGCCGGCGGCCGCCGCCTCACGCTGACCTCCGCCCGCACCTTCCACGCC
TCCACCCGCCTCCTCCTCGCCGACGCCGCGCCGCCTCCACTACCGCCACGGAAGCCCATGGGAGCATTCCGCGGG
GGGTGAGTCTCGCGTTTCCTTTGCCCGTGGATCCTCGCTGACTGGCTCAGTCTCTTCGGATTCCTCTTCGGCTGC
GTTCTGTCCGGCGGTGCCGTCTATAGCTATGCCGTTCAGGAGCTCAAGGCCTCTAGCGATCTCGTCACCGACGAC
TTATACGTATGTTTTCGCTTTCTCAAGGCCTGCGTCAAGTGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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