Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|3021
Gene name
LocationContig_269:9561..10151
Strand-
Gene length (bp)590
Transcript length (bp)537
Coding sequence length (bp)537
Protein length (aa) 179

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17254 DUF5321 Family of unknown function (DUF5321) 5.3E-52 31 168

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

Domain # Start End Length
1 67 86 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|3021
MMLSRCTGQARALISKQPIPLQLRRYGNVPATVADVGFWKSLVPKAWRRENQDGEPRPKSKGWNPATYFIVMFLF
IGSMSIQMIVLRKEMDEHTRRSSVKIALLREIVEKIRNGESVDVEKALGTGDAERESNWEEVLRAIERGETRPKP
SKQSESEDKTVNDQDGVRKKTAGIEGFF*
Coding >Ophun1|3021
ATGATGCTATCGAGATGCACAGGTCAGGCCCGGGCCCTGATTTCGAAGCAGCCGATCCCACTACAGCTCCGGAGA
TACGGTAACGTTCCCGCCACCGTCGCCGATGTCGGCTTCTGGAAGTCGCTGGTGCCCAAGGCCTGGCGACGGGAG
AATCAAGATGGCGAGCCGCGACCCAAGTCCAAGGGTTGGAACCCGGCGACGTATTTCATCGTCATGTTTCTCTTC
ATCGGGTCCATGTCAATCCAGATGATTGTGCTGCGCAAGGAGATGGACGAGCACACGCGTCGGTCATCCGTCAAG
ATAGCGTTACTGCGCGAGATTGTCGAAAAGATTCGCAACGGGGAAAGCGTCGACGTCGAGAAGGCGCTGGGCACG
GGCGATGCCGAGAGAGAGTCTAATTGGGAAGAGGTGTTGCGAGCGATTGAACGCGGCGAGACGCGGCCCAAGCCA
TCGAAGCAATCCGAGTCGGAGGATAAGACAGTCAACGACCAGGACGGCGTTCGGAAGAAGACGGCTGGCATCGAA
GGCTTTTTCTGA
Transcript >Ophun1|3021
ATGATGCTATCGAGATGCACAGGTCAGGCCCGGGCCCTGATTTCGAAGCAGCCGATCCCACTACAGCTCCGGAGA
TACGGTAACGTTCCCGCCACCGTCGCCGATGTCGGCTTCTGGAAGTCGCTGGTGCCCAAGGCCTGGCGACGGGAG
AATCAAGATGGCGAGCCGCGACCCAAGTCCAAGGGTTGGAACCCGGCGACGTATTTCATCGTCATGTTTCTCTTC
ATCGGGTCCATGTCAATCCAGATGATTGTGCTGCGCAAGGAGATGGACGAGCACACGCGTCGGTCATCCGTCAAG
ATAGCGTTACTGCGCGAGATTGTCGAAAAGATTCGCAACGGGGAAAGCGTCGACGTCGAGAAGGCGCTGGGCACG
GGCGATGCCGAGAGAGAGTCTAATTGGGAAGAGGTGTTGCGAGCGATTGAACGCGGCGAGACGCGGCCCAAGCCA
TCGAAGCAATCCGAGTCGGAGGATAAGACAGTCAACGACCAGGACGGCGTTCGGAAGAAGACGGCTGGCATCGAA
GGCTTTTTCTGA
Gene >Ophun1|3021
ATGATGCTATCGAGATGCACAGGTCAGGCCCGGGCCCTGATTTCGAAGCAGCCGATCCCACTACAGCTCCGGAGA
TACGGTAACGTTCCCGCCACCGTCGCCGATGTCGGCTTCTGGAAGTCGCTGGTGCCCAAGGCCTGGCGACGGGAG
AATCAAGATGGCGAGCCGCGACCCAAGTCCAAGGGTTGGAACCCGGCGACGTATTTCATCGTCATGTTTCTCTTC
ATCGGGTCCATGTCAATCCAGATGATTGTGCTGCGCAAGGAGATGGACGAGCACACGCGTCGGTCATCCGTCAAG
ATAGCGTTACTGCGCGAGATTGTCGAAAAGATTCGCAACGGGGAAAGCGTCGACGTCGAGAAGGCGCTGGGCACG
GGCGATGCCGAGAGAGAGTCTAATTGGGAAGAGGGTGAGTCGCAAAAACGGGCGAGCTGTCGACCCTGGCTAAGA
CACAGGCGACAGTGTTGCGAGCGATTGAACGCGGCGAGACGCGGCCCAAGCCATCGAAGCAATCCGAGTCGGAGG
ATAAGACAGTCAACGACCAGGACGGCGTTCGGAAGAAGACGGCTGGCATCGAAGGCTTTTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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