Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|2940
Gene name
Location	Contig_260:12300..13762
Strand	-
Gene length (bp)	1462
Transcript length (bp)	1302
Coding sequence length (bp)	1302
Protein length (aa)	434

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	7.2E-16	80	381
PF12146	Hydrolase_4	Serine aminopeptidase, S33	2.3E-07	112	214

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q12405\|LPX1_YEAST	Peroxisomal membrane protein LPX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LPX1 PE=1 SV=1	77	337	6.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 40	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|2940 MVPALTARLASRSRRAGLCSRFTRMSSTVFHQLQHTVNAAHTREYVGATADGDDDRPLLSVKQYVPLDNPHPQPG DVTIIGAHANGFSKELYEPLWDEVYQQLARRCIRLRSVWIADMWNQGQSGVLNEKMLGNDPSWFDHARDLMNLIN AKFDDIRHPIIGIGHSMGATQLALLSLSHPRLFDALVLIDPVIDVGTGALSPAVLSSNRRDIWPSRKAAAEKFDE SAFYKTWDARVLQRWKEYGLRPVPTEIHPAHGECDERVTLTTSKHQEVFTFLRPMYRGETMVDLDPEQKDKMTGY PFYRPEPAYVFKRLPELRPSTLYVFGARSDLSTPEMQEEKMATTGVGIGGSGGGAVGRVRQVVLDCGHLVAMEKV DECAEAITEFLDTELARQRREAELQKQDSEEKPRQKRMMMDERWMKEINGSSSRQPKL*
Coding	>Ophun1\|2940 ATGGTGCCCGCGCTGACGGCCCGCCTCGCATCGCGGAGTCGCCGCGCAGGTCTCTGCAGCCGCTTCACGAGGATG TCGTCCACCGTCTTCCACCAGCTGCAGCATACGGTCAACGCGGCGCACACGCGCGAGTACGTGGGCGCCACAGCC GACGGCGATGACGATAGGCCTCTGCTCAGTGTCAAGCAGTACGTGCCGCTGGACAACCCTCATCCGCAGCCGGGC GACGTTACCATCATCGGCGCGCACGCCAATGGCTTCTCCAAGGAGCTGTACGAGCCGCTCTGGGACGAAGTCTAC CAGCAGCTGGCCCGTCGTTGCATTCGTCTCCGCTCTGTTTGGATCGCCGACATGTGGAATCAGGGCCAATCCGGT GTGCTCAACGAGAAGATGCTGGGCAACGACCCGAGCTGGTTCGATCATGCGCGAGATCTCATGAACCTCATCAAC GCCAAGTTCGACGACATCCGCCATCCCATCATCGGCATCGGCCATAGCATGGGAGCCACTCAGCTAGCATTGCTA TCTCTCTCTCATCCACGGCTCTTTGACGCCCTGGTCTTGATCGATCCTGTCATCGACGTCGGCACCGGAGCCCTC TCGCCCGCCGTCCTCTCATCCAATCGACGCGATATCTGGCCTTCAAGAAAGGCTGCGGCCGAAAAGTTCGACGAG AGCGCCTTTTACAAGACTTGGGACGCGCGAGTGCTCCAGCGCTGGAAGGAGTACGGCCTGCGACCGGTGCCGACG GAGATTCACCCTGCGCACGGCGAATGCGACGAGCGCGTCACGCTCACTACGTCCAAACACCAGGAGGTCTTTACC TTTCTCAGGCCCATGTATCGCGGCGAGACGATGGTGGACCTGGATCCGGAGCAGAAGGATAAGATGACCGGATAT CCCTTCTACCGGCCCGAGCCGGCGTACGTCTTCAAGCGTCTCCCGGAGTTGCGTCCCAGCACGCTGTACGTCTTT GGCGCCCGCTCGGACTTGTCGACGCCGGAGATGCAAGAGGAGAAGATGGCAACGACGGGTGTCGGCATAGGCGGC AGCGGTGGCGGCGCCGTGGGACGCGTGAGGCAGGTCGTCCTCGATTGCGGCCATCTGGTGGCCATGGAGAAAGTC GACGAGTGCGCCGAGGCTATTACCGAGTTTCTCGACACCGAGCTGGCCAGGCAGCGGCGCGAGGCGGAATTGCAG AAGCAGGATTCGGAGGAGAAGCCGAGACAGAAGCGGATGATGATGGATGAGCGGTGGATGAAGGAGATTAACGGC TCGAGTAGCCGCCAGCCTAAGCTGTGA
Transcript	>Ophun1\|2940 ATGGTGCCCGCGCTGACGGCCCGCCTCGCATCGCGGAGTCGCCGCGCAGGTCTCTGCAGCCGCTTCACGAGGATG TCGTCCACCGTCTTCCACCAGCTGCAGCATACGGTCAACGCGGCGCACACGCGCGAGTACGTGGGCGCCACAGCC GACGGCGATGACGATAGGCCTCTGCTCAGTGTCAAGCAGTACGTGCCGCTGGACAACCCTCATCCGCAGCCGGGC GACGTTACCATCATCGGCGCGCACGCCAATGGCTTCTCCAAGGAGCTGTACGAGCCGCTCTGGGACGAAGTCTAC CAGCAGCTGGCCCGTCGTTGCATTCGTCTCCGCTCTGTTTGGATCGCCGACATGTGGAATCAGGGCCAATCCGGT GTGCTCAACGAGAAGATGCTGGGCAACGACCCGAGCTGGTTCGATCATGCGCGAGATCTCATGAACCTCATCAAC GCCAAGTTCGACGACATCCGCCATCCCATCATCGGCATCGGCCATAGCATGGGAGCCACTCAGCTAGCATTGCTA TCTCTCTCTCATCCACGGCTCTTTGACGCCCTGGTCTTGATCGATCCTGTCATCGACGTCGGCACCGGAGCCCTC TCGCCCGCCGTCCTCTCATCCAATCGACGCGATATCTGGCCTTCAAGAAAGGCTGCGGCCGAAAAGTTCGACGAG AGCGCCTTTTACAAGACTTGGGACGCGCGAGTGCTCCAGCGCTGGAAGGAGTACGGCCTGCGACCGGTGCCGACG GAGATTCACCCTGCGCACGGCGAATGCGACGAGCGCGTCACGCTCACTACGTCCAAACACCAGGAGGTCTTTACC TTTCTCAGGCCCATGTATCGCGGCGAGACGATGGTGGACCTGGATCCGGAGCAGAAGGATAAGATGACCGGATAT CCCTTCTACCGGCCCGAGCCGGCGTACGTCTTCAAGCGTCTCCCGGAGTTGCGTCCCAGCACGCTGTACGTCTTT GGCGCCCGCTCGGACTTGTCGACGCCGGAGATGCAAGAGGAGAAGATGGCAACGACGGGTGTCGGCATAGGCGGC AGCGGTGGCGGCGCCGTGGGACGCGTGAGGCAGGTCGTCCTCGATTGCGGCCATCTGGTGGCCATGGAGAAAGTC GACGAGTGCGCCGAGGCTATTACCGAGTTTCTCGACACCGAGCTGGCCAGGCAGCGGCGCGAGGCGGAATTGCAG AAGCAGGATTCGGAGGAGAAGCCGAGACAGAAGCGGATGATGATGGATGAGCGGTGGATGAAGGAGATTAACGGC TCGAGTAGCCGCCAGCCTAAGCTGTGA
Gene	>Ophun1\|2940 ATGGTGCCCGCGCTGACGGCCCGCCTCGCATCGCGGAGTCGCCGCGCAGGTCTCTGCAGCCGCTTCACGAGGATG TCGTCCACCGTCTTCCACCAGCTGCAGCATACGGTCAACGCGGCGCACACGCGCGAGTACGTGGGCGCCACAGCC GACGGCGATGACGATAGGCCTCTGCTCAGTGTCAAGCAGTACGTGCCGCTGGACAACCCTCATCCGCAGCCGGGC GACGTTACCATCATCGGCGCGCACGCCAATGGCTTCTCCAAGGTGATGATGAACGAATCAACTCTCTTGGGGAGC TTTCCTGACCTTGTTTCGTGATGCAGGAGCTGTACGAGCCGCTCTGGGACGAAGTCTACCAGCAGCTGGCCCGTC GTTGCATTCGTCTCCGCTCTGTTTGGATCGCCGACATGTGGAATCAGGGCCAATCCGGTGTGCTCAACGAGAAGA TGCTGGGCAACGACCGTAAGCGCCTGGTCCTTGATAAAACTTTCTTTTACTGACTTTTTCTGGCAGCGAGCTGGT TCGATCATGCGCGAGATCTCATGAACCTCATCAACGCCAAGTTCGACGACATCCGCCATCCCATCATCGGCATCG GCCATAGCATGGGAGCCACTCAGCTGTAGGTTGACCAATCTCAATAATCATACGCACCTGCTCACGCGCTCCAAG AGCATTGCTATCTCTCTCTCATCCACGGCTCTTTGACGCCCTGGTCTTGATCGATCCTGTCATCGACGTCGGCAC CGGAGCCCTCTCGCCCGCCGTCCTCTCATCCAATCGACGCGATATCTGGCCTTCAAGAAAGGCTGCGGCCGAAAA GTTCGACGAGAGCGCCTTTTACAAGACTTGGGACGCGCGAGTGCTCCAGCGCTGGAAGGAGTACGGCCTGCGACC GGTGCCGACGGAGATTCACCCTGCGCACGGCGAATGCGACGAGCGCGTCACGCTCACTACGTCCAAACACCAGGA GGTCTTTACCTTTCTCAGGCCCATGTATCGCGGCGAGACGATGGTGGACCTGGATCCGGAGCAGAAGGATAAGAT GACCGGATATCCCTTCTACCGGCCCGAGCCGGCGTACGTCTTCAAGCGTCTCCCGGAGTTGCGTCCCAGCACGCT GTACGTCTTTGGCGCCCGCTCGGACTTGTCGACGCCGGAGATGCAAGAGGAGAAGATGGCAACGACGGGTGTCGG CATAGGCGGCAGCGGTGGCGGCGCCGTGGGACGCGTGAGGCAGGTCGTCCTCGATTGCGGCCATCTGGTGGCCAT GGAGAAAGTCGACGAGTGCGCCGAGGCTATTACCGAGTTTCTCGACACCGAGCTGGCCAGGCAGCGGCGCGAGGC GGAATTGCAGAAGCAGGATTCGGAGGAGAAGCCGAGACAGAAGCGGATGATGATGGATGAGCGGTGGATGAAGGA GATTAACGGCTCGAGTAGCCGCCAGCCTAAGCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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