Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|2923
Gene name
Location	Contig_26:29376..31192
Strand	+
Gene length (bp)	1816
Transcript length (bp)	1707
Coding sequence length (bp)	1707
Protein length (aa)	569

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01302	CAP_GLY	CAP-Gly domain	1.0E-19	6	72
PF13516	LRR_6	Leucine Rich repeat	5.0E-01	307	320

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5RBD9\|TBCE_PONAB	Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1	6	494	3.0E-66
sp\|Q15813\|TBCE_HUMAN	Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1	6	494	3.0E-65
sp\|Q32KS0\|TBCE_BOVIN	Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1	6	494	3.0E-63
sp\|Q8CIV8\|TBCE_MOUSE	Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1	6	496	7.0E-61
sp\|Q5U508\|TBCE_XENLA	Tubulin-specific chaperone E OS=Xenopus laevis GN=tbce PE=2 SV=1	8	498	2.0E-58

[Show all]

[Show less]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5RBD9\|TBCE_PONAB	Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1	6	494	3.0E-66
sp\|Q15813\|TBCE_HUMAN	Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1	6	494	3.0E-65
sp\|Q32KS0\|TBCE_BOVIN	Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1	6	494	3.0E-63
sp\|Q8CIV8\|TBCE_MOUSE	Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1	6	496	7.0E-61
sp\|Q5U508\|TBCE_XENLA	Tubulin-specific chaperone E OS=Xenopus laevis GN=tbce PE=2 SV=1	8	498	2.0E-58
sp\|Q5FVQ9\|TBCE_RAT	Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1	6	496	5.0E-58
sp\|Q5U378\|TBCE_DANRE	Tubulin-specific chaperone E OS=Danio rerio GN=tbce PE=2 SV=2	1	492	5.0E-46
sp\|Q8GRL7\|TBCE_ARATH	Tubulin-folding cofactor E OS=Arabidopsis thaliana GN=TFCE PE=2 SV=1	6	495	2.0E-37
sp\|P39937\|PAC2_YEAST	Protein PAC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAC2 PE=1 SV=1	6	400	8.0E-29
sp\|Q10303\|ALP21_SCHPO	Cell polarity protein alp21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alp21 PE=1 SV=2	67	483	1.0E-26
sp\|Q55CN0\|TBCE_DICDI	Tubulin-specific chaperone E OS=Dictyostelium discoideum GN=tbce PE=3 SV=1	5	346	3.0E-20
sp\|Q5QJ74\|TBCEL_HUMAN	Tubulin-specific chaperone cofactor E-like protein OS=Homo sapiens GN=TBCEL PE=1 SV=2	75	452	2.0E-17
sp\|Q5PQJ7\|TBCEL_RAT	Tubulin-specific chaperone cofactor E-like protein OS=Rattus norvegicus GN=Tbcel PE=1 SV=1	75	452	7.0E-17
sp\|Q8C5W3\|TBCEL_MOUSE	Tubulin-specific chaperone cofactor E-like protein OS=Mus musculus GN=Tbcel PE=1 SV=1	75	452	8.0E-15

[Show less]

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|2923 MDDPYVGQRISFRGSLCTVRYVGPVADTQGPWLGVEWDDATRGKHDGCHRGHRYFSCLSSSPNAASFVRPSRPAD QPVSFLAALREKYAPEAAPQGNDGIVISGGKVAEEVGFDRVRRRLARLEDLKVVILDDMSIAYAGEGSVADTCPA IAHLDLSRNLLERVEPVVDICAQLPALRRLGLNGNRFRDVMTDEALDRHPTSFPAVDELALGETLLSWPELCRIA TTCPSLTTLSVGANQLSSLSSVSYRSLTSTLTTLNLEYNDFRAVSDLATLADLTALRNLHLKGNAIVNMAAPDAS APIFPLSLQYLDVSYNDIRDWSFVDALATSFPGLNGLRIAHNPVYDHGWDQDDKTPFSSEESHMLTIGRLASLQT LNFTQIKAQDRKNAEIFYLSRIAKQLAAVPEPAEPSVIALHPRYRHLCSVHGSPDVIRRSGVNPAFLESRLITVH FHLARSHASATARIPKACDMYSVKGAAGKLLGVSPLRLRLIWETDEWDPVAGCEAIGESSDEEDDVDDPSRRPPP GEPSSGTLSGRWVKREVELRDSPKQLGYCVDGMDVRIRVEEVR*
Coding	>Ophun1\|2923 ATGGACGATCCTTACGTCGGCCAGCGCATATCCTTCCGAGGCAGCCTCTGCACCGTCCGCTACGTCGGCCCCGTC GCCGATACCCAAGGCCCCTGGCTGGGCGTCGAATGGGACGACGCAACGCGCGGCAAACACGACGGCTGCCACCGA GGCCACCGCTACTTCAGCTGCCTTTCGTCTTCTCCCAATGCCGCCTCCTTCGTGCGTCCGTCGCGGCCGGCGGAC CAGCCGGTGAGCTTCCTCGCAGCTCTACGGGAAAAGTACGCTCCCGAAGCCGCGCCTCAAGGCAATGACGGCATC GTCATATCCGGTGGGAAAGTCGCTGAGGAGGTGGGCTTCGACCGTGTCCGCCGACGGCTGGCTCGCCTCGAGGAC CTCAAGGTCGTCATCCTCGACGACATGAGCATCGCGTACGCAGGAGAGGGTAGCGTCGCCGACACGTGTCCGGCC ATTGCCCACCTGGATCTCAGCCGGAATCTGCTGGAGCGCGTAGAGCCCGTTGTCGACATCTGCGCTCAACTGCCG GCTTTGCGTCGTCTGGGCCTCAACGGGAATCGCTTCCGAGACGTCATGACGGACGAGGCCCTCGATCGACATCCT ACATCCTTCCCTGCTGTCGACGAGCTTGCACTCGGCGAGACGCTGCTCAGCTGGCCAGAGCTGTGCCGCATCGCC ACAACGTGTCCGTCGCTGACGACGCTGTCCGTCGGCGCCAATCAGCTGTCCTCCCTATCCTCGGTGTCCTATCGA AGCCTGACTTCCACCCTGACGACTCTCAATCTCGAGTACAACGACTTTCGAGCCGTCTCGGACCTCGCGACGCTG GCTGATCTCACCGCCCTGCGCAACCTGCATCTCAAGGGAAACGCCATCGTCAACATGGCAGCCCCCGACGCCTCC GCTCCAATCTTCCCCCTTTCGCTGCAGTACCTCGACGTGTCCTACAATGACATCCGGGATTGGTCCTTCGTCGAC GCCCTCGCCACCTCCTTTCCGGGCCTCAACGGCCTGCGCATCGCGCACAACCCCGTATACGACCATGGCTGGGAC CAAGACGACAAGACGCCTTTCTCATCCGAGGAATCGCACATGCTCACTATAGGCCGTCTCGCCTCCCTCCAGACA CTCAACTTTACGCAAATCAAGGCCCAAGACCGCAAGAACGCCGAGATCTTCTACCTATCGAGGATAGCCAAGCAG CTCGCGGCCGTGCCCGAGCCAGCCGAGCCGTCCGTCATCGCCCTACATCCTCGCTACCGGCACCTCTGCAGCGTA CACGGATCCCCCGACGTGATCCGCCGCAGCGGCGTCAACCCTGCCTTCCTCGAGTCTCGCCTCATCACCGTCCAT TTCCACCTTGCGCGCTCCCACGCCAGCGCAACGGCCCGTATCCCCAAGGCTTGCGACATGTACTCGGTCAAGGGA GCGGCCGGCAAGCTCCTTGGTGTCTCCCCCTTACGTCTACGTCTCATCTGGGAGACGGATGAGTGGGACCCGGTG GCCGGGTGCGAAGCGATCGGGGAAAGCAGCGATGAGGAAGACGACGTGGATGACCCGAGCCGGCGCCCTCCTCCC GGGGAGCCTTCTTCCGGGACGTTGTCTGGCCGGTGGGTTAAGCGAGAGGTTGAGCTGAGGGACAGTCCCAAGCAG CTCGGCTACTGCGTTGACGGCATGGACGTGCGCATCCGCGTCGAGGAGGTTCGGTGA
Transcript	>Ophun1\|2923 ATGGACGATCCTTACGTCGGCCAGCGCATATCCTTCCGAGGCAGCCTCTGCACCGTCCGCTACGTCGGCCCCGTC GCCGATACCCAAGGCCCCTGGCTGGGCGTCGAATGGGACGACGCAACGCGCGGCAAACACGACGGCTGCCACCGA GGCCACCGCTACTTCAGCTGCCTTTCGTCTTCTCCCAATGCCGCCTCCTTCGTGCGTCCGTCGCGGCCGGCGGAC CAGCCGGTGAGCTTCCTCGCAGCTCTACGGGAAAAGTACGCTCCCGAAGCCGCGCCTCAAGGCAATGACGGCATC GTCATATCCGGTGGGAAAGTCGCTGAGGAGGTGGGCTTCGACCGTGTCCGCCGACGGCTGGCTCGCCTCGAGGAC CTCAAGGTCGTCATCCTCGACGACATGAGCATCGCGTACGCAGGAGAGGGTAGCGTCGCCGACACGTGTCCGGCC ATTGCCCACCTGGATCTCAGCCGGAATCTGCTGGAGCGCGTAGAGCCCGTTGTCGACATCTGCGCTCAACTGCCG GCTTTGCGTCGTCTGGGCCTCAACGGGAATCGCTTCCGAGACGTCATGACGGACGAGGCCCTCGATCGACATCCT ACATCCTTCCCTGCTGTCGACGAGCTTGCACTCGGCGAGACGCTGCTCAGCTGGCCAGAGCTGTGCCGCATCGCC ACAACGTGTCCGTCGCTGACGACGCTGTCCGTCGGCGCCAATCAGCTGTCCTCCCTATCCTCGGTGTCCTATCGA AGCCTGACTTCCACCCTGACGACTCTCAATCTCGAGTACAACGACTTTCGAGCCGTCTCGGACCTCGCGACGCTG GCTGATCTCACCGCCCTGCGCAACCTGCATCTCAAGGGAAACGCCATCGTCAACATGGCAGCCCCCGACGCCTCC GCTCCAATCTTCCCCCTTTCGCTGCAGTACCTCGACGTGTCCTACAATGACATCCGGGATTGGTCCTTCGTCGAC GCCCTCGCCACCTCCTTTCCGGGCCTCAACGGCCTGCGCATCGCGCACAACCCCGTATACGACCATGGCTGGGAC CAAGACGACAAGACGCCTTTCTCATCCGAGGAATCGCACATGCTCACTATAGGCCGTCTCGCCTCCCTCCAGACA CTCAACTTTACGCAAATCAAGGCCCAAGACCGCAAGAACGCCGAGATCTTCTACCTATCGAGGATAGCCAAGCAG CTCGCGGCCGTGCCCGAGCCAGCCGAGCCGTCCGTCATCGCCCTACATCCTCGCTACCGGCACCTCTGCAGCGTA CACGGATCCCCCGACGTGATCCGCCGCAGCGGCGTCAACCCTGCCTTCCTCGAGTCTCGCCTCATCACCGTCCAT TTCCACCTTGCGCGCTCCCACGCCAGCGCAACGGCCCGTATCCCCAAGGCTTGCGACATGTACTCGGTCAAGGGA GCGGCCGGCAAGCTCCTTGGTGTCTCCCCCTTACGTCTACGTCTCATCTGGGAGACGGATGAGTGGGACCCGGTG GCCGGGTGCGAAGCGATCGGGGAAAGCAGCGATGAGGAAGACGACGTGGATGACCCGAGCCGGCGCCCTCCTCCC GGGGAGCCTTCTTCCGGGACGTTGTCTGGCCGGTGGGTTAAGCGAGAGGTTGAGCTGAGGGACAGTCCCAAGCAG CTCGGCTACTGCGTTGACGGCATGGACGTGCGCATCCGCGTCGAGGAGGTTCGGTGA
Gene	>Ophun1\|2923 ATGGACGATCCTTACGTCGGCCAGCGCATATCCTTCCGAGGCAGCCTCTGCACCGTCCGCTACGTCGGCCCCGTC GCCGATACCCAAGGCCCCTGGCTGGGCGTCGAATGGGACGACGCAACGCGCGGCAAACACGACGGCTGCCACCGA GGCCACCGCTACTTCAGCTGTAACCATCGTCTGAAGGCTTCCTCTTCAGGTCAGCTCGCTAATGTACACATAGGC CTTTCGTCTTCTCCCAATGCCGCCTCCTTCGTGCGTCCGTCGCGGCCGGCGGACCAGCCGGTGAGCTTCCTCGCA GCTCTACGGGAAAAGTACGCTCCCGAAGCCGCGCCTCAAGGCAATGACGGCATCGTCATATCCGGTGGGAAAGTC GCTGAGGAGGTGGGCTTCGACCGTGTCCGCCGACGGCTGGCTCGCCTCGAGGACCTCAAGGTCGTCATCCTCGAC GACATGAGCATCGCGTACGCAGGAGAGGGTAGCGTCGCCGACACGTGTCCGGCCATTGCCCACCTGGATCTCAGC CGGAATCTGCTGGAGCGCGTAGAGCCCGTTGTCGACATCTGCGCTCAACTGCCGGCTTTGCGTCGTCTGGGCCTC AAGTAGGTGCGGCATCAGATGACCATCGGGGTTGGTTCTCGCTGACGGCCCACGCAGCGGGAATCGCTTCCGAGA CGTCATGACGGACGAGGCCCTCGATCGACATCCTACATCCTTCCCTGCTGTCGACGAGCTTGCACTCGGCGAGAC GCTGCTCAGCTGGCCAGAGCTGTGCCGCATCGCCACAACGTGTCCGTCGCTGACGACGCTGTCCGTCGGCGCCAA TCAGCTGTCCTCCCTATCCTCGGTGTCCTATCGAAGCCTGACTTCCACCCTGACGACTCTCAATCTCGAGTACAA CGACTTTCGAGCCGTCTCGGACCTCGCGACGCTGGCTGATCTCACCGCCCTGCGCAACCTGCATCTCAAGGGAAA CGCCATCGTCAACATGGCAGCCCCCGACGCCTCCGCTCCAATCTTCCCCCTTTCGCTGCAGTACCTCGACGTGTC CTACAATGACATCCGGGATTGGTCCTTCGTCGACGCCCTCGCCACCTCCTTTCCGGGCCTCAACGGCCTGCGCAT CGCGCACAACCCCGTATACGACCATGGCTGGGACCAAGACGACAAGACGCCTTTCTCATCCGAGGAATCGCACAT GCTCACTATAGGCCGTCTCGCCTCCCTCCAGACACTCAACTTTACGCAAATCAAGGCCCAAGACCGCAAGAACGC CGAGATCTTCTACCTATCGAGGATAGCCAAGCAGCTCGCGGCCGTGCCCGAGCCAGCCGAGCCGTCCGTCATCGC CCTACATCCTCGCTACCGGCACCTCTGCAGCGTACACGGATCCCCCGACGTGATCCGCCGCAGCGGCGTCAACCC TGCCTTCCTCGAGTCTCGCCTCATCACCGTCCATTTCCACCTTGCGCGCTCCCACGCCAGCGCAACGGCCCGTAT CCCCAAGGCTTGCGACATGTACTCGGTCAAGGGAGCGGCCGGCAAGCTCCTTGGTGTCTCCCCCTTACGTCTACG TCTCATCTGGGAGACGGATGAGTGGGACCCGGTGGCCGGGTGCGAAGCGATCGGGGAAAGCAGCGATGAGGAAGA CGACGTGGATGACCCGAGCCGGCGCCCTCCTCCCGGGGAGCCTTCTTCCGGGACGTTGTCTGGCCGGTGGGTTAA GCGAGAGGTTGAGCTGAGGGACAGTCCCAAGCAGCTCGGCTACTGCGTTGACGGCATGGACGTGCGCATCCGCGT CGAGGAGGTTCGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail