Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|2914
Gene name
LocationContig_26:12382..12940
Strand+
Gene length (bp)558
Transcript length (bp)558
Coding sequence length (bp)558
Protein length (aa) 186

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12716 Apq12 Nuclear pore assembly and biogenesis 3.4E-06 74 124

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 69 91 22
2 104 126 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|2914
MEAYLFSLVADLLPPNLAAQAHHHLVRPDSPLQSCKRQLAASAYAAATAAADVAARALGDSSSVLLDQGGGGSLA
GWLAIFAVLAVVVLAVRWVGRLVVWWTRFALRLASWAVVFALAACVWQRGVAATVRDVVVGGAALMRYLALLRDV
WLAEYSRYELQQQQQQQQQGQHRQFTSSRARGSAW*
Coding >Ophun1|2914
ATGGAAGCCTACCTCTTCAGCCTCGTCGCCGACCTCCTCCCCCCCAACCTCGCCGCCCAAGCGCACCACCACCTC
GTGCGCCCAGACTCGCCCCTCCAGTCCTGCAAGCGGCAGCTGGCGGCGTCAGCCTACGCGGCCGCCACGGCAGCA
GCCGACGTGGCCGCCCGCGCGCTGGGGGACAGCAGCAGCGTGCTGTTGGATCAGGGGGGCGGAGGGTCGCTGGCG
GGCTGGCTGGCCATCTTTGCCGTCCTGGCTGTCGTGGTGCTGGCGGTGCGGTGGGTGGGCAGGCTGGTGGTTTGG
TGGACGCGGTTTGCGCTGCGGCTTGCGTCGTGGGCTGTTGTCTTTGCCTTGGCTGCTTGTGTTTGGCAGCGGGGG
GTTGCGGCTACGGTTCGCGATGTGGTTGTTGGCGGGGCGGCTTTGATGCGTTATCTGGCTTTGCTGCGCGATGTT
TGGCTCGCTGAGTACAGTCGGTACGAGCTTCAACAGCAGCAGCAGCAGCAACAACAGGGACAGCATCGGCAGTTT
ACGTCTTCTCGCGCCAGAGGGTCGGCCTGGTGA
Transcript >Ophun1|2914
ATGGAAGCCTACCTCTTCAGCCTCGTCGCCGACCTCCTCCCCCCCAACCTCGCCGCCCAAGCGCACCACCACCTC
GTGCGCCCAGACTCGCCCCTCCAGTCCTGCAAGCGGCAGCTGGCGGCGTCAGCCTACGCGGCCGCCACGGCAGCA
GCCGACGTGGCCGCCCGCGCGCTGGGGGACAGCAGCAGCGTGCTGTTGGATCAGGGGGGCGGAGGGTCGCTGGCG
GGCTGGCTGGCCATCTTTGCCGTCCTGGCTGTCGTGGTGCTGGCGGTGCGGTGGGTGGGCAGGCTGGTGGTTTGG
TGGACGCGGTTTGCGCTGCGGCTTGCGTCGTGGGCTGTTGTCTTTGCCTTGGCTGCTTGTGTTTGGCAGCGGGGG
GTTGCGGCTACGGTTCGCGATGTGGTTGTTGGCGGGGCGGCTTTGATGCGTTATCTGGCTTTGCTGCGCGATGTT
TGGCTCGCTGAGTACAGTCGGTACGAGCTTCAACAGCAGCAGCAGCAGCAACAACAGGGACAGCATCGGCAGTTT
ACGTCTTCTCGCGCCAGAGGGTCGGCCTGGTGA
Gene >Ophun1|2914
ATGGAAGCCTACCTCTTCAGCCTCGTCGCCGACCTCCTCCCCCCCAACCTCGCCGCCCAAGCGCACCACCACCTC
GTGCGCCCAGACTCGCCCCTCCAGTCCTGCAAGCGGCAGCTGGCGGCGTCAGCCTACGCGGCCGCCACGGCAGCA
GCCGACGTGGCCGCCCGCGCGCTGGGGGACAGCAGCAGCGTGCTGTTGGATCAGGGGGGCGGAGGGTCGCTGGCG
GGCTGGCTGGCCATCTTTGCCGTCCTGGCTGTCGTGGTGCTGGCGGTGCGGTGGGTGGGCAGGCTGGTGGTTTGG
TGGACGCGGTTTGCGCTGCGGCTTGCGTCGTGGGCTGTTGTCTTTGCCTTGGCTGCTTGTGTTTGGCAGCGGGGG
GTTGCGGCTACGGTTCGCGATGTGGTTGTTGGCGGGGCGGCTTTGATGCGTTATCTGGCTTTGCTGCGCGATGTT
TGGCTCGCTGAGTACAGTCGGTACGAGCTTCAACAGCAGCAGCAGCAGCAACAACAGGGACAGCATCGGCAGTTT
ACGTCTTCTCGCGCCAGAGGGTCGGCCTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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