Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|2883
Gene name
LocationContig_257:15466..16674
Strand+
Gene length (bp)1208
Transcript length (bp)1152
Coding sequence length (bp)1152
Protein length (aa) 384

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03403 PAF-AH_p_II Platelet-activating factor acetylhydrolase, isoform II 4.2E-12 77 165
PF03403 PAF-AH_p_II Platelet-activating factor acetylhydrolase, isoform II 2.8E-06 222 325

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4AZY1|A1751_ARTBC Probable 1-alkyl-2-acetylglycerophosphocholine esterase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01751 PE=1 SV=1 1 322 7.0E-41

GO

GO Term Description Terminal node
GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity Yes
GO:0016042 lipid catabolic process Yes
GO:0052689 carboxylic ester hydrolase activity No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:1901575 organic substance catabolic process No
GO:0071704 organic substance metabolic process No
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0006629 lipid metabolic process No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0009056 catabolic process No
GO:0008150 biological_process No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|2883
MLSPLLLVAALVAVVRAILMPGPIGAFPVAMRTHELTDGSRNDPYAPHNGTHLRRILVSVFLPLDPVQYGDAEIQ
QLPYMPPLTAAEYSRLAQIISPFFEAVFEKLAIEYRRLETIDRGREHATKKKSYPVVLFSPGLGGSRLMYSAGAR
DLASQGYVVITIDHPYDASIVEFPDGSFVRGVNFSTTAQIAAATKVRVQDVLFLVNQLYDSEVLGRLTEGFPGLV
NVKKMAMYGHSLGGATAAEALRRDSRLLGGMNWDGEMQGEAASQGLVQPFVQVGTPDHRHQNNSNWPAFYKKLRG
PKLELEVKNTTHISFTDLPLLLSTMEVPDEAQPSLKHFLGTVSGRRLRRTLTGILKASLEFVFERNGEDVGRLAE
DYCGLTVV*
Coding >Ophun1|2883
ATGCTCTCGCCTCTCCTTCTCGTCGCTGCCCTCGTGGCCGTCGTCCGGGCCATCTTGATGCCTGGGCCGATTGGG
GCGTTTCCGGTGGCGATGCGAACACACGAGCTCACCGATGGCAGCCGGAACGATCCTTATGCGCCTCACAATGGC
ACTCACCTGAGAAGGATCCTCGTCTCCGTCTTTCTGCCGCTCGACCCGGTTCAGTACGGGGATGCCGAGATCCAG
CAGCTGCCTTATATGCCCCCTCTTACGGCGGCCGAGTACAGCAGACTTGCCCAGATCATCTCCCCCTTTTTCGAA
GCCGTGTTTGAGAAGCTGGCGATTGAATATCGACGGCTGGAGACGATTGATCGGGGTCGAGAGCACGCGACGAAA
AAGAAGAGCTACCCGGTCGTCCTCTTTTCGCCCGGACTGGGCGGGTCGAGGTTGATGTACTCTGCCGGCGCCAGG
GATCTGGCCAGTCAAGGCTACGTCGTCATCACCATAGATCATCCTTACGACGCGTCCATTGTCGAGTTTCCCGAT
GGCTCCTTCGTGCGCGGCGTCAACTTTTCGACGACGGCTCAAATTGCGGCCGCCACCAAGGTCCGCGTGCAAGAC
GTCTTATTCCTTGTGAACCAGCTTTACGACTCTGAAGTCCTAGGGCGGCTCACGGAAGGCTTTCCCGGCCTCGTC
AACGTGAAGAAGATGGCCATGTACGGCCACTCGCTGGGCGGCGCGACGGCAGCCGAAGCCTTGCGCAGGGACAGC
CGGCTCCTCGGCGGCATGAACTGGGACGGAGAGATGCAGGGAGAAGCGGCAAGCCAGGGCCTCGTCCAGCCCTTT
GTCCAGGTCGGCACCCCGGATCATCGCCACCAGAACAACTCCAACTGGCCGGCCTTTTACAAGAAGCTGCGCGGG
CCCAAGCTGGAGCTAGAGGTGAAGAACACGACGCACATTTCGTTTACAGACCTGCCGCTGCTGCTGTCGACGATG
GAGGTTCCGGATGAGGCGCAGCCGTCGTTGAAGCACTTCCTGGGGACTGTCAGCGGACGGCGACTGAGGCGGACG
TTGACGGGGATCTTGAAGGCGTCGTTGGAGTTTGTGTTTGAGAGGAATGGGGAGGACGTGGGGAGGTTGGCCGAG
GATTATTGCGGATTGACGGTTGTTTAG
Transcript >Ophun1|2883
ATGCTCTCGCCTCTCCTTCTCGTCGCTGCCCTCGTGGCCGTCGTCCGGGCCATCTTGATGCCTGGGCCGATTGGG
GCGTTTCCGGTGGCGATGCGAACACACGAGCTCACCGATGGCAGCCGGAACGATCCTTATGCGCCTCACAATGGC
ACTCACCTGAGAAGGATCCTCGTCTCCGTCTTTCTGCCGCTCGACCCGGTTCAGTACGGGGATGCCGAGATCCAG
CAGCTGCCTTATATGCCCCCTCTTACGGCGGCCGAGTACAGCAGACTTGCCCAGATCATCTCCCCCTTTTTCGAA
GCCGTGTTTGAGAAGCTGGCGATTGAATATCGACGGCTGGAGACGATTGATCGGGGTCGAGAGCACGCGACGAAA
AAGAAGAGCTACCCGGTCGTCCTCTTTTCGCCCGGACTGGGCGGGTCGAGGTTGATGTACTCTGCCGGCGCCAGG
GATCTGGCCAGTCAAGGCTACGTCGTCATCACCATAGATCATCCTTACGACGCGTCCATTGTCGAGTTTCCCGAT
GGCTCCTTCGTGCGCGGCGTCAACTTTTCGACGACGGCTCAAATTGCGGCCGCCACCAAGGTCCGCGTGCAAGAC
GTCTTATTCCTTGTGAACCAGCTTTACGACTCTGAAGTCCTAGGGCGGCTCACGGAAGGCTTTCCCGGCCTCGTC
AACGTGAAGAAGATGGCCATGTACGGCCACTCGCTGGGCGGCGCGACGGCAGCCGAAGCCTTGCGCAGGGACAGC
CGGCTCCTCGGCGGCATGAACTGGGACGGAGAGATGCAGGGAGAAGCGGCAAGCCAGGGCCTCGTCCAGCCCTTT
GTCCAGGTCGGCACCCCGGATCATCGCCACCAGAACAACTCCAACTGGCCGGCCTTTTACAAGAAGCTGCGCGGG
CCCAAGCTGGAGCTAGAGGTGAAGAACACGACGCACATTTCGTTTACAGACCTGCCGCTGCTGCTGTCGACGATG
GAGGTTCCGGATGAGGCGCAGCCGTCGTTGAAGCACTTCCTGGGGACTGTCAGCGGACGGCGACTGAGGCGGACG
TTGACGGGGATCTTGAAGGCGTCGTTGGAGTTTGTGTTTGAGAGGAATGGGGAGGACGTGGGGAGGTTGGCCGAG
GATTATTGCGGATTGACGGTTGTTTAG
Gene >Ophun1|2883
ATGCTCTCGCCTCTCCTTCTCGTCGCTGCCCTCGTGGCCGTCGTCCGGGCCATCTTGATGCCTGGGCCGATTGGG
GCGTTTCCGGTGGCGATGCGAACACACGAGCTCACCGATGGCAGCCGGAACGATCCTTATGCGCCTCACAATGGC
ACTCACCTGAGAAGGATCCTCGTCTCCGTCTTTCTGCCGCTCGACCCGGTTCAGTACGGGGATGCCGAGATCCAG
CAGCTGCCTTATATGCCCCCTCTTACGGCGGCCGAGTACAGCAGACTTGCCCAGATCATCTCCCCCTTTTTCGAA
GCCGTGTTTGAGAAGCTGGCGATTGAATATCGACGGCTGGAGACGATTGATCGGGGTCGAGAGCACGCGACGAAA
AAGAAGAGCTACCCGGTCGTCCTCTTTTCGCCCGGACTGGGCGGGTCGAGGTTGATGTACTCTGCCGGCGCCAGG
GATCTGGCCAGTCAAGGCTACGTCGTCATCACCATAGATCATCCTTACGACGCGTCCATTGTCGAGTTTCCCGAT
GGCTCCTTCGTGCGCGGCGTCAACTTTTCGACGACGGCTCAAATTGCGGCCGCCACCAAGGTTGGGCGTGCTCGC
ACGAATGGATTGGTGTTGACGAAGGTGCTGACGGCGTGCAGGTCCGCGTGCAAGACGTCTTATTCCTTGTGAACC
AGCTTTACGACTCTGAAGTCCTAGGGCGGCTCACGGAAGGCTTTCCCGGCCTCGTCAACGTGAAGAAGATGGCCA
TGTACGGCCACTCGCTGGGCGGCGCGACGGCAGCCGAAGCCTTGCGCAGGGACAGCCGGCTCCTCGGCGGCATGA
ACTGGGACGGAGAGATGCAGGGAGAAGCGGCAAGCCAGGGCCTCGTCCAGCCCTTTGTCCAGGTCGGCACCCCGG
ATCATCGCCACCAGAACAACTCCAACTGGCCGGCCTTTTACAAGAAGCTGCGCGGGCCCAAGCTGGAGCTAGAGG
TGAAGAACACGACGCACATTTCGTTTACAGACCTGCCGCTGCTGCTGTCGACGATGGAGGTTCCGGATGAGGCGC
AGCCGTCGTTGAAGCACTTCCTGGGGACTGTCAGCGGACGGCGACTGAGGCGGACGTTGACGGGGATCTTGAAGG
CGTCGTTGGAGTTTGTGTTTGAGAGGAATGGGGAGGACGTGGGGAGGTTGGCCGAGGATTATTGCGGATTGACGG
TTGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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