Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|2870
Gene name
LocationContig_255:17822..18540
Strand+
Gene length (bp)718
Transcript length (bp)609
Coding sequence length (bp)609
Protein length (aa) 203

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12850 Metallophos_2 Calcineurin-like phosphoesterase superfamily domain 5.4E-12 4 162

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9UTI5|VPS29_SCHPO Vacuolar protein sorting-associated protein 29 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps29 PE=3 SV=1 3 194 2.0E-52
sp|Q9UBQ0|VPS29_HUMAN Vacuolar protein sorting-associated protein 29 OS=Homo sapiens GN=VPS29 PE=1 SV=1 3 194 2.0E-49
sp|B2RZ78|VPS29_RAT Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus GN=Vps29 PE=1 SV=2 3 193 9.0E-49
sp|Q7ZV68|VPS29_DANRE Vacuolar protein sorting-associated protein 29 OS=Danio rerio GN=vps29 PE=2 SV=1 3 193 1.0E-48
sp|Q5R9Z1|VPS29_PONAB Vacuolar protein sorting-associated protein 29 OS=Pongo abelii GN=VPS29 PE=2 SV=1 3 193 2.0E-48
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Swissprot ID Swissprot Description Start End E-value
sp|Q9UTI5|VPS29_SCHPO Vacuolar protein sorting-associated protein 29 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps29 PE=3 SV=1 3 194 2.0E-52
sp|Q9UBQ0|VPS29_HUMAN Vacuolar protein sorting-associated protein 29 OS=Homo sapiens GN=VPS29 PE=1 SV=1 3 194 2.0E-49
sp|B2RZ78|VPS29_RAT Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus GN=Vps29 PE=1 SV=2 3 193 9.0E-49
sp|Q7ZV68|VPS29_DANRE Vacuolar protein sorting-associated protein 29 OS=Danio rerio GN=vps29 PE=2 SV=1 3 193 1.0E-48
sp|Q5R9Z1|VPS29_PONAB Vacuolar protein sorting-associated protein 29 OS=Pongo abelii GN=VPS29 PE=2 SV=1 3 193 2.0E-48
sp|Q9QZ88|VPS29_MOUSE Vacuolar protein sorting-associated protein 29 OS=Mus musculus GN=Vps29 PE=1 SV=1 3 193 2.0E-48
sp|Q3T0M0|VPS29_BOVIN Vacuolar protein sorting-associated protein 29 OS=Bos taurus GN=VPS29 PE=2 SV=1 4 193 3.0E-48
sp|Q5ZIL2|VPS29_CHICK Vacuolar protein sorting-associated protein 29 OS=Gallus gallus GN=VPS29 PE=2 SV=1 4 193 4.0E-48
sp|Q6DEU3|VPS29_XENTR Vacuolar protein sorting-associated protein 29 OS=Xenopus tropicalis GN=vps29 PE=2 SV=1 3 193 1.0E-47
sp|Q6GP62|VPS29_XENLA Vacuolar protein sorting-associated protein 29 OS=Xenopus laevis GN=vps29 PE=2 SV=1 3 193 1.0E-47
sp|Q9STT2|VPS29_ARATH Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana GN=VPS29 PE=2 SV=1 4 201 2.0E-42
sp|Q54IF7|VPS29_DICDI Vacuolar protein sorting-associated protein 29 OS=Dictyostelium discoideum GN=vps29 PE=3 SV=1 3 193 7.0E-41
sp|P38759|VPS29_YEAST Vacuolar protein sorting-associated protein 29 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS29 PE=1 SV=1 3 156 1.0E-32
sp|O27802|Y1774_METTH Putative metallophosphoesterase MTH_1774 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_1774 PE=3 SV=1 3 138 5.0E-06
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|2870
MAFLILVIGDLHIPDRALDIPPKFKKLLAPGKIGQTLCLGNLTDKQTYEYLRSVAPDLKMVKGRFDVEAASLPLT
HVVTHGGIRIGFLEGFTIVSSEPDILLAEANRLDVDVLCWGGTHRFDAFEYMDKFFVNPGSATGAYCNGWDFKDG
DAPTPSFCLMDVQGISLTLYVYQLRTDDKGNENVAVEKVTYTKPVEPTASSS*
Coding >Ophun1|2870
ATGGCCTTCCTCATCCTCGTCATCGGCGACCTCCACATCCCCGACCGCGCCCTCGACATCCCCCCCAAGTTCAAG
AAGCTCCTCGCGCCCGGAAAGATCGGCCAAACGCTATGCCTAGGCAACCTCACCGACAAGCAAACATACGAATAC
CTCCGGTCCGTCGCGCCCGACCTCAAGATGGTCAAGGGCCGGTTCGACGTCGAGGCTGCGTCTCTGCCGCTCACG
CACGTCGTTACCCACGGTGGCATCCGCATCGGCTTCCTAGAGGGCTTCACCATCGTCTCCTCCGAGCCGGATATT
CTTCTCGCTGAGGCGAATCGGTTGGATGTCGATGTGCTTTGCTGGGGTGGCACACATCGCTTCGACGCGTTTGAG
TATATGGACAAGTTCTTCGTCAATCCGGGCAGTGCCACGGGCGCGTACTGCAATGGCTGGGATTTCAAGGATGGC
GATGCTCCGACGCCGAGCTTCTGCCTCATGGATGTCCAGGGCATCTCCCTCACCCTCTACGTCTACCAATTACGC
ACCGACGACAAAGGCAACGAAAACGTGGCCGTCGAAAAGGTCACCTACACAAAGCCAGTCGAGCCAACCGCCAGC
TCATCGTGA
Transcript >Ophun1|2870
ATGGCCTTCCTCATCCTCGTCATCGGCGACCTCCACATCCCCGACCGCGCCCTCGACATCCCCCCCAAGTTCAAG
AAGCTCCTCGCGCCCGGAAAGATCGGCCAAACGCTATGCCTAGGCAACCTCACCGACAAGCAAACATACGAATAC
CTCCGGTCCGTCGCGCCCGACCTCAAGATGGTCAAGGGCCGGTTCGACGTCGAGGCTGCGTCTCTGCCGCTCACG
CACGTCGTTACCCACGGTGGCATCCGCATCGGCTTCCTAGAGGGCTTCACCATCGTCTCCTCCGAGCCGGATATT
CTTCTCGCTGAGGCGAATCGGTTGGATGTCGATGTGCTTTGCTGGGGTGGCACACATCGCTTCGACGCGTTTGAG
TATATGGACAAGTTCTTCGTCAATCCGGGCAGTGCCACGGGCGCGTACTGCAATGGCTGGGATTTCAAGGATGGC
GATGCTCCGACGCCGAGCTTCTGCCTCATGGATGTCCAGGGCATCTCCCTCACCCTCTACGTCTACCAATTACGC
ACCGACGACAAAGGCAACGAAAACGTGGCCGTCGAAAAGGTCACCTACACAAAGCCAGTCGAGCCAACCGCCAGC
TCATCGTGA
Gene >Ophun1|2870
ATGGCCTTCCTCATCCTCGTCATCGGCGACCTCCACATCCCCGACCGCGCCCTCGACATCCCCCCCAAGGTAGAA
CCACCCCCGGGAGACCAACCCCCAAGCTGAACGCCCCCAGTTCAAGAAGCTCCTCGCGCCCGGAAAGATCGGCCA
AACGCTATGCCTAGGCAACCTCACCGACAAGCAAACATACGAATACCTCCGGTCCGTCGCGCCCGACCTCAAGAT
GGTCAAGGGCCGGTTCGACGTCGAGGCTGCGTCTCTGCCGCTCACGCACGTCGTTACCCACGGTGGCATCCGCAT
CGGCTTCCTAGAGGGCTTCACCATCGTCTCCTCCGAGCCGGATATTCTTCTCGCTGAGGCGAATCGGTTGGATGT
CGATGTGCTTTGCTGGGGTGGCACACATCGCTTCGACGCGTTTGAGTATATGGACAAGTTCTTCGTCAATCCGGG
CAGTGCCACGGGCGCGTACTGCAATGGCTGGGATTTCAAGGATGGCGATGCTCCGACGCCGAGCTTCTGCCTCAT
GGATGTGTGTTCTCTTGCTACTGCCAGTCTGAGTCAAACAGCGATGCTGACGACACTCACGTAAAAGGTCCAGGG
CATCTCCCTCACCCTCTACGTCTACCAATTACGCACCGACGACAAAGGCAACGAAAACGTGGCCGTCGAAAAGGT
CACCTACACAAAGCCAGTCGAGCCAACCGCCAGCTCATCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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