Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|2730
Gene name
LocationContig_243:3801..4983
Strand+
Gene length (bp)1182
Transcript length (bp)1116
Coding sequence length (bp)1116
Protein length (aa) 372

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12955 DUF3844 Domain of unknown function (DUF3844) 1.3E-35 262 365

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O74728|YH93_SCHPO Uncharacterized endoplasmic reticulum membrane protein C1709.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1709.03 PE=3 SV=2 190 363 3.0E-16

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 326 348 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|2730
MKLTAGLLAASCGFFAAAQSVAKVYLLPPRETSPTSPSLSPALARLVLLQRLGAINHEPALRDYTESAAIKDAVS
ALNTFGKETSPLVRGEDGGKPSQLVVVLEGVTADQMDVLGRTLGNRPAFEISGTSSSKARDEMVRVDLQAAGARD
VGHCNLRQITNPLEDCWNGQQSAFAKFDFRQVSVMIDDLVHRLTQLSQLAKIGELETTLVLLPWAASTKAQPVKP
QELRKRQAEQVSLDRTPPAPTPEHAALYATTGRIPSCFNSEESCVTATKNCSGHGGCMDKYSNGDGSSGGEACFA
CRCLSTRTDSGSLTHWAGPTCAKQDISVAFWLFAGTTLALVFIVWLAVSMLFNVGQEKLPGVIGAGVSRAR*
Coding >Ophun1|2730
ATGAAGCTCACCGCCGGCCTGCTTGCGGCCTCTTGCGGCTTCTTTGCAGCCGCTCAGTCTGTCGCAAAGGTCTAC
CTTTTACCGCCCCGCGAAACCTCCCCGACTTCGCCTTCTCTCTCTCCCGCCTTAGCCCGCCTGGTACTGCTGCAG
CGGCTGGGCGCCATCAACCACGAGCCGGCTCTCCGGGACTACACCGAAAGTGCGGCCATCAAAGATGCTGTATCT
GCGCTCAACACTTTCGGAAAGGAAACGTCGCCACTCGTGAGGGGCGAAGATGGTGGGAAGCCTAGTCAGCTGGTT
GTGGTGCTGGAGGGCGTCACGGCGGATCAGATGGATGTTCTGGGCCGGACGCTCGGCAACCGACCAGCTTTTGAG
ATATCAGGCACCTCATCTTCCAAGGCCCGAGATGAAATGGTTAGAGTCGACCTTCAGGCAGCGGGCGCCAGGGAC
GTTGGTCACTGCAATTTGCGGCAAATCACCAACCCGCTAGAAGACTGCTGGAATGGGCAGCAGTCTGCATTCGCC
AAATTCGATTTCCGACAGGTCTCGGTAATGATCGATGACCTCGTCCACAGACTCACTCAGCTATCCCAGCTTGCA
AAAATAGGCGAGCTTGAGACTACACTGGTTCTCCTGCCGTGGGCCGCGAGCACAAAGGCCCAGCCGGTCAAGCCT
CAAGAGTTGCGCAAGCGCCAGGCCGAGCAAGTTTCCCTCGATAGGACACCACCCGCGCCGACGCCTGAACATGCA
GCCCTGTACGCCACTACAGGCCGCATTCCGTCGTGCTTCAACTCGGAGGAGAGCTGTGTGACGGCCACCAAGAAC
TGCTCGGGCCATGGCGGTTGCATGGACAAGTACTCCAACGGAGACGGCTCCAGCGGTGGCGAGGCCTGCTTCGCT
TGCCGTTGTCTCAGCACAAGGACCGACTCTGGCAGCCTGACCCACTGGGCAGGGCCAACGTGCGCCAAGCAGGAT
ATAAGCGTTGCGTTCTGGCTCTTTGCTGGCACCACCCTCGCCCTCGTCTTTATCGTATGGCTGGCTGTCTCGATG
CTGTTCAACGTTGGGCAGGAGAAGCTGCCTGGGGTCATTGGCGCGGGCGTTTCGCGAGCTAGATGA
Transcript >Ophun1|2730
ATGAAGCTCACCGCCGGCCTGCTTGCGGCCTCTTGCGGCTTCTTTGCAGCCGCTCAGTCTGTCGCAAAGGTCTAC
CTTTTACCGCCCCGCGAAACCTCCCCGACTTCGCCTTCTCTCTCTCCCGCCTTAGCCCGCCTGGTACTGCTGCAG
CGGCTGGGCGCCATCAACCACGAGCCGGCTCTCCGGGACTACACCGAAAGTGCGGCCATCAAAGATGCTGTATCT
GCGCTCAACACTTTCGGAAAGGAAACGTCGCCACTCGTGAGGGGCGAAGATGGTGGGAAGCCTAGTCAGCTGGTT
GTGGTGCTGGAGGGCGTCACGGCGGATCAGATGGATGTTCTGGGCCGGACGCTCGGCAACCGACCAGCTTTTGAG
ATATCAGGCACCTCATCTTCCAAGGCCCGAGATGAAATGGTTAGAGTCGACCTTCAGGCAGCGGGCGCCAGGGAC
GTTGGTCACTGCAATTTGCGGCAAATCACCAACCCGCTAGAAGACTGCTGGAATGGGCAGCAGTCTGCATTCGCC
AAATTCGATTTCCGACAGGTCTCGGTAATGATCGATGACCTCGTCCACAGACTCACTCAGCTATCCCAGCTTGCA
AAAATAGGCGAGCTTGAGACTACACTGGTTCTCCTGCCGTGGGCCGCGAGCACAAAGGCCCAGCCGGTCAAGCCT
CAAGAGTTGCGCAAGCGCCAGGCCGAGCAAGTTTCCCTCGATAGGACACCACCCGCGCCGACGCCTGAACATGCA
GCCCTGTACGCCACTACAGGCCGCATTCCGTCGTGCTTCAACTCGGAGGAGAGCTGTGTGACGGCCACCAAGAAC
TGCTCGGGCCATGGCGGTTGCATGGACAAGTACTCCAACGGAGACGGCTCCAGCGGTGGCGAGGCCTGCTTCGCT
TGCCGTTGTCTCAGCACAAGGACCGACTCTGGCAGCCTGACCCACTGGGCAGGGCCAACGTGCGCCAAGCAGGAT
ATAAGCGTTGCGTTCTGGCTCTTTGCTGGCACCACCCTCGCCCTCGTCTTTATCGTATGGCTGGCTGTCTCGATG
CTGTTCAACGTTGGGCAGGAGAAGCTGCCTGGGGTCATTGGCGCGGGCGTTTCGCGAGCTAGATGA
Gene >Ophun1|2730
ATGAAGCTCACCGCCGGCCTGCTTGCGGCCTCTTGCGGCTTCTTTGCAGCCGCTCAGTCTGTCGCAAAGGTCTAC
CTTTTACCGCCCCGCGAAACCTCCCCGACTTCGCCTTCTCTCTCTCCCGCCTTAGCCCGCCTGGTACTGCTGCAG
CGGCTGGGCGCCATCAACCACGAGCCGGCTCTCCGGGACTACACCGAAAGTGCGGCCATCAAAGATGCTGTATCT
GCGCTCAACACTTTCGGAAAGGAAACGTCGCCACTCGTGAGGGGCGAAGATGGTGGGAAGCCTAGTCAGCTGGTT
GTGGTGCTGGAGGGCGTCACGGCGGATCAGATGGATGTTCTGGGCCGGACGCTCGGCAACCGACCAGCTTTTGAG
ATATCAGGCACCTCATCTTCCAAGGCCCGAGATGAAATGGTTAGAGTCGACCTTCAGGCAGCGGGCGCCAGGGAC
GTTGGTCACTGCAATTTGCGGCAAATCACCAACCCGCTAGAAGACTGCTGGAATGGGCAGCAGTCTGCATTCGCC
AAATTCGATTTCCGACAGGTATATCGTCGCCTCCATGTTTAATAATTCTTCAGGAAGGACGGGACTGATGTTGGC
TTGCTGCAGGTCTCGGTAATGATCGATGACCTCGTCCACAGACTCACTCAGCTATCCCAGCTTGCAAAAATAGGC
GAGCTTGAGACTACACTGGTTCTCCTGCCGTGGGCCGCGAGCACAAAGGCCCAGCCGGTCAAGCCTCAAGAGTTG
CGCAAGCGCCAGGCCGAGCAAGTTTCCCTCGATAGGACACCACCCGCGCCGACGCCTGAACATGCAGCCCTGTAC
GCCACTACAGGCCGCATTCCGTCGTGCTTCAACTCGGAGGAGAGCTGTGTGACGGCCACCAAGAACTGCTCGGGC
CATGGCGGTTGCATGGACAAGTACTCCAACGGAGACGGCTCCAGCGGTGGCGAGGCCTGCTTCGCTTGCCGTTGT
CTCAGCACAAGGACCGACTCTGGCAGCCTGACCCACTGGGCAGGGCCAACGTGCGCCAAGCAGGATATAAGCGTT
GCGTTCTGGCTCTTTGCTGGCACCACCCTCGCCCTCGTCTTTATCGTATGGCTGGCTGTCTCGATGCTGTTCAAC
GTTGGGCAGGAGAAGCTGCCTGGGGTCATTGGCGCGGGCGTTTCGCGAGCTAGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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