Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|2653
Gene name
LocationContig_237:22192..23298
Strand+
Gene length (bp)1106
Transcript length (bp)978
Coding sequence length (bp)978
Protein length (aa) 326

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 2.1E-13 87 169

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P38287|CSH1_YEAST Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1 12 321 9.0E-53
sp|P33300|SUR1_YEAST Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1 67 305 6.0E-50
sp|Q9UT67|IMT2_SCHPO Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1 16 285 1.0E-49
sp|Q10323|IMT3_SCHPO Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1 67 284 5.0E-43
sp|O14084|IMT1_SCHPO Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2 7 281 2.0E-26
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P38287|CSH1_YEAST Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1 12 321 9.0E-53
sp|P33300|SUR1_YEAST Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1 67 305 6.0E-50
sp|Q9UT67|IMT2_SCHPO Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1 16 285 1.0E-49
sp|Q10323|IMT3_SCHPO Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1 67 284 5.0E-43
sp|O14084|IMT1_SCHPO Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2 7 281 2.0E-26
sp|Q5UQW4|YL373_MIMIV Uncharacterized glycosyltransferase L373 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L373 PE=3 SV=1 67 195 2.0E-15
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19
2 285 307 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|2653
MASSHVRLRRLILGLVFIAIVFSLVSRVAVPVNRIFGAHAGNALTQEQVRAAAEAAASRGHRRKRPVPRILHQVF
HNWHQPGNETLPPDWQAARQTCLDLHPTWEHKLWTELASREFIRSEYPYFLDTYDGFKFPVQRIDALRYFLMRHF
GGIYMDLDNGCRANLDPLLHYPAWVTDGGQGTLSNNIIGAEPEHPFWILMTDSLGPWARDFLLPYITISYASGQW
YETEMWQIYHARKPPTEPDLLRVMMDMRPSGAPWVFFTAGRGGTWDNWDNQVLGWMGNHLFRLMLYIVASAGLVA
GVWYLVVVGQRRRYRRLANGPPLSP*
Coding >Ophun1|2653
ATGGCCTCGTCCCACGTCCGGTTGAGGCGTCTCATCCTCGGCCTCGTCTTCATCGCCATCGTCTTCAGCCTCGTC
TCCCGGGTCGCCGTCCCCGTGAATCGCATCTTCGGAGCTCATGCCGGTAACGCCCTGACGCAGGAGCAGGTTCGC
GCTGCCGCCGAAGCCGCTGCTTCCAGGGGTCACAGGCGTAAGAGGCCTGTGCCGCGCATCCTGCATCAGGTCTTC
CATAACTGGCATCAACCGGGCAACGAGACGCTGCCGCCGGATTGGCAGGCTGCTCGCCAGACCTGTCTCGACCTA
CATCCTACCTGGGAGCACAAGCTCTGGACTGAACTGGCGTCTCGCGAATTCATCCGATCCGAGTACCCCTACTTT
CTCGATACGTATGATGGCTTCAAGTTCCCCGTTCAGCGCATCGACGCCTTGCGCTACTTTCTCATGAGGCATTTC
GGCGGCATCTACATGGATCTCGACAACGGCTGCCGTGCAAACCTCGATCCGCTCCTCCACTACCCAGCCTGGGTT
ACCGACGGCGGCCAAGGCACCCTCAGTAATAACATCATCGGCGCCGAGCCCGAGCACCCCTTTTGGATTCTCATG
ACCGATTCTTTGGGCCCTTGGGCTCGCGACTTTCTCCTTCCCTACATCACCATCAGCTACGCCAGCGGGCAGTGG
TACGAGACGGAGATGTGGCAGATCTACCACGCCCGCAAGCCGCCCACCGAGCCCGATCTCTTGCGCGTCATGATG
GATATGCGTCCGTCGGGCGCCCCCTGGGTCTTCTTTACTGCCGGACGCGGCGGCACCTGGGATAACTGGGATAAC
CAGGTCCTCGGCTGGATGGGGAACCATCTGTTCCGATTGATGCTATACATTGTCGCCTCGGCTGGCCTTGTGGCC
GGTGTCTGGTACCTCGTAGTCGTCGGTCAGCGACGACGATATCGAAGACTGGCGAACGGACCCCCTCTTTCTCCC
TAG
Transcript >Ophun1|2653
ATGGCCTCGTCCCACGTCCGGTTGAGGCGTCTCATCCTCGGCCTCGTCTTCATCGCCATCGTCTTCAGCCTCGTC
TCCCGGGTCGCCGTCCCCGTGAATCGCATCTTCGGAGCTCATGCCGGTAACGCCCTGACGCAGGAGCAGGTTCGC
GCTGCCGCCGAAGCCGCTGCTTCCAGGGGTCACAGGCGTAAGAGGCCTGTGCCGCGCATCCTGCATCAGGTCTTC
CATAACTGGCATCAACCGGGCAACGAGACGCTGCCGCCGGATTGGCAGGCTGCTCGCCAGACCTGTCTCGACCTA
CATCCTACCTGGGAGCACAAGCTCTGGACTGAACTGGCGTCTCGCGAATTCATCCGATCCGAGTACCCCTACTTT
CTCGATACGTATGATGGCTTCAAGTTCCCCGTTCAGCGCATCGACGCCTTGCGCTACTTTCTCATGAGGCATTTC
GGCGGCATCTACATGGATCTCGACAACGGCTGCCGTGCAAACCTCGATCCGCTCCTCCACTACCCAGCCTGGGTT
ACCGACGGCGGCCAAGGCACCCTCAGTAATAACATCATCGGCGCCGAGCCCGAGCACCCCTTTTGGATTCTCATG
ACCGATTCTTTGGGCCCTTGGGCTCGCGACTTTCTCCTTCCCTACATCACCATCAGCTACGCCAGCGGGCAGTGG
TACGAGACGGAGATGTGGCAGATCTACCACGCCCGCAAGCCGCCCACCGAGCCCGATCTCTTGCGCGTCATGATG
GATATGCGTCCGTCGGGCGCCCCCTGGGTCTTCTTTACTGCCGGACGCGGCGGCACCTGGGATAACTGGGATAAC
CAGGTCCTCGGCTGGATGGGGAACCATCTGTTCCGATTGATGCTATACATTGTCGCCTCGGCTGGCCTTGTGGCC
GGTGTCTGGTACCTCGTAGTCGTCGGTCAGCGACGACGATATCGAAGACTGGCGAACGGACCCCCTCTTTCTCCC
TAG
Gene >Ophun1|2653
ATGGCCTCGTCCCACGTCCGGTTGAGGCGTCTCATCCTCGGCCTCGTCTTCATCGCCATCGTCTTCAGCCTCGTC
TCCCGGGTCGCCGTCCCCGTGAATCGCATCTTCGGAGCTCATGCCGGTAACGCCCTGACGCAGGAGCAGGTTCGC
GCTGCCGCCGAAGCCGCTGCTTCCAGGGGTCACAGGCGTAAGAGGCCTGTGCCGCGCATCCTGCATCAGGTCTTC
CATAACTGGCATCAACCGGGCAACGAGACGCTGCCGCCGGATTGGCAGGCTGCTCGCCAGACCTGTCTCGACCTA
CATCCTACCTGGGAGCACAAGGTGAGGCTCTCGACTGTCGTCTCTGCTGTCGACTGACGGTATCGCAAGCTCTGG
ACTGAACTGGCGTCTCGCGAATTCATCCGATCCGAGTACCCCTACTTTCTCGATACGTATGATGGCTTCAAGTTC
CCCGTTCAGCGCATCGACGCCTTGCGCTACTTTCTCATGAGGCATTTCGGCGGCATCTACATGGATCTCGACAAC
GTACTCGAACACCCCCCGTCTCTCGTCGACCCCAAGCCTACAAGAATCACATCCGCTGACCCTCTTCCTTCTCCC
GCCAGGGCTGCCGTGCAAACCTCGATCCGCTCCTCCACTACCCAGCCTGGGTTACCGACGGCGGCCAAGGCACCC
TCAGTAATAACATCATCGGCGCCGAGCCCGAGCACCCCTTTTGGATTCTCATGACCGATTCTTTGGGCCCTTGGG
CTCGCGACTTTCTCCTTCCCTACATCACCATCAGCTACGCCAGCGGGCAGTGGTACGAGACGGAGATGTGGCAGA
TCTACCACGCCCGCAAGCCGCCCACCGAGCCCGATCTCTTGCGCGTCATGATGGATATGCGTCCGTCGGGCGCCC
CCTGGGTCTTCTTTACTGCCGGACGCGGCGGCACCTGGGATAACTGGGATAACCAGGTCCTCGGCTGGATGGGGA
ACCATCTGTTCCGATTGATGCTATACATTGTCGCCTCGGCTGGCCTTGTGGCCGGTGTCTGGTACCTCGTAGTCG
TCGGTCAGCGACGACGATATCGAAGACTGGCGAACGGACCCCCTCTTTCTCCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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