Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|262
Gene name
LocationContig_106:30978..31931
Strand+
Gene length (bp)953
Transcript length (bp)891
Coding sequence length (bp)891
Protein length (aa) 297

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

Domain # Start End Length
1 153 175 22
2 190 209 19
3 221 243 22
4 258 280 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|262
MDDPNATIRPRRESKKKLRQKKSTPVSENLSLTSSPTFSAASSRSAAGAPMSPSSTMGDFWRLLPVGTNSRRNSS
VAADGQRLRREPSFMASTSSESVVQPATGTPLTPFPPLKAAEPGSSTQRASPGQQHQDEVADGVYGYRWSLNTAM
HGAVLFGQCVVTLAVLSGFLYTAIVDKSNVNPVGQEMPWKYAETALGLTLATCVGVLALHETRVLSSVAVLYLQA
LILIMTMMTSLAMWIWIFTHSTSRIVMGAVVSGVAMLMGTAMLAFFRAALVWWIIEDRGVLGGSGDEVFEN*
Coding >Ophun1|262
ATGGACGACCCCAACGCAACCATTCGTCCCCGGCGAGAGAGTAAGAAGAAACTGCGCCAGAAGAAAAGCACCCCC
GTCTCCGAGAACCTGTCGTTGACCTCGTCTCCTACTTTCTCAGCCGCTTCCTCGCGCTCGGCCGCTGGTGCGCCC
ATGTCTCCCTCTTCCACCATGGGCGACTTCTGGCGTCTCCTCCCCGTTGGCACCAACTCGCGTCGCAACTCGAGC
GTGGCGGCGGATGGCCAGCGCCTCAGGCGGGAACCCAGCTTCATGGCTTCCACGTCGTCTGAGTCGGTTGTTCAG
CCGGCTACTGGGACGCCGCTCACGCCTTTCCCGCCCCTGAAGGCTGCTGAGCCGGGCTCATCGACGCAGCGAGCT
TCGCCTGGGCAGCAGCATCAGGATGAGGTCGCCGATGGAGTGTACGGCTATCGATGGAGCCTCAACACGGCCATG
CATGGTGCCGTTTTGTTCGGGCAGTGTGTCGTCACGCTGGCTGTGCTCAGCGGCTTTCTTTACACTGCCATCGTC
GACAAGAGCAACGTGAATCCCGTGGGCCAGGAAATGCCATGGAAATACGCGGAGACGGCTCTCGGCCTCACTCTG
GCCACCTGCGTCGGCGTGCTCGCCCTGCACGAGACACGCGTGCTTTCATCTGTGGCAGTTCTCTACCTGCAGGCG
CTGATCCTCATCATGACCATGATGACCTCGCTCGCCATGTGGATCTGGATCTTCACGCACAGCACCAGCCGCATC
GTCATGGGAGCCGTCGTCAGCGGCGTGGCCATGCTCATGGGCACCGCCATGTTGGCCTTTTTCAGGGCTGCCTTG
GTCTGGTGGATTATCGAGGACCGTGGCGTGCTGGGCGGCAGCGGCGATGAAGTTTTCGAGAACTAG
Transcript >Ophun1|262
ATGGACGACCCCAACGCAACCATTCGTCCCCGGCGAGAGAGTAAGAAGAAACTGCGCCAGAAGAAAAGCACCCCC
GTCTCCGAGAACCTGTCGTTGACCTCGTCTCCTACTTTCTCAGCCGCTTCCTCGCGCTCGGCCGCTGGTGCGCCC
ATGTCTCCCTCTTCCACCATGGGCGACTTCTGGCGTCTCCTCCCCGTTGGCACCAACTCGCGTCGCAACTCGAGC
GTGGCGGCGGATGGCCAGCGCCTCAGGCGGGAACCCAGCTTCATGGCTTCCACGTCGTCTGAGTCGGTTGTTCAG
CCGGCTACTGGGACGCCGCTCACGCCTTTCCCGCCCCTGAAGGCTGCTGAGCCGGGCTCATCGACGCAGCGAGCT
TCGCCTGGGCAGCAGCATCAGGATGAGGTCGCCGATGGAGTGTACGGCTATCGATGGAGCCTCAACACGGCCATG
CATGGTGCCGTTTTGTTCGGGCAGTGTGTCGTCACGCTGGCTGTGCTCAGCGGCTTTCTTTACACTGCCATCGTC
GACAAGAGCAACGTGAATCCCGTGGGCCAGGAAATGCCATGGAAATACGCGGAGACGGCTCTCGGCCTCACTCTG
GCCACCTGCGTCGGCGTGCTCGCCCTGCACGAGACACGCGTGCTTTCATCTGTGGCAGTTCTCTACCTGCAGGCG
CTGATCCTCATCATGACCATGATGACCTCGCTCGCCATGTGGATCTGGATCTTCACGCACAGCACCAGCCGCATC
GTCATGGGAGCCGTCGTCAGCGGCGTGGCCATGCTCATGGGCACCGCCATGTTGGCCTTTTTCAGGGCTGCCTTG
GTCTGGTGGATTATCGAGGACCGTGGCGTGCTGGGCGGCAGCGGCGATGAAGTTTTCGAGAACTAG
Gene >Ophun1|262
ATGGACGACCCCAACGCAACCATTCGTCCCCGGCGAGAGAGTAAGAAGAAACTGCGCCAGAAGAAAAGCACCCCC
GTCTCCGAGAACCTGTCGTTGACCTCGTCTCCTACTTTCTCAGCCGCTTCCTCGCGCTCGGCCGCTGGTGCGCCC
ATGTCTCCCTCTTCCACCATGGGCGACTTCTGGCGTCTCCTCCCCGTTGGCACCAACTCGCGTCGCAACTCGAGC
GTGGCGGCGGATGGCCAGCGCCTCAGGCGGGAACCCAGCTTCATGGCTTCCACGTCGTCTGAGTCGGTTGTTCAG
CCGGCTACTGGGACGCCGCTCACGCCTTTCCCGCCCCTGAAGGCTGCTGAGCCGGGCTCATCGACGCAGCGAGCT
TCGCCTGGGCAGCAGCATCAGGATGAGGTCGCCGATGGAGTGTACGGCTATCGATGGAGCCTCAACACGGCCATG
CATGGTGCCGTTTTGTTCGGGCAGTGTGTCGTCACGCTGGCTGTGCTCAGCGGCTTTCTTTACACTGCCATCGTC
GACAAGAGCAACGTGAATCCCGTGGGCCAGGAAATGTGCGTTACCAACTTTTCTCCCTGTTTCTCCCCCTTCAGC
TCAATGCTAACCGATGATACAGGCCATGGAAATACGCGGAGACGGCTCTCGGCCTCACTCTGGCCACCTGCGTCG
GCGTGCTCGCCCTGCACGAGACACGCGTGCTTTCATCTGTGGCAGTTCTCTACCTGCAGGCGCTGATCCTCATCA
TGACCATGATGACCTCGCTCGCCATGTGGATCTGGATCTTCACGCACAGCACCAGCCGCATCGTCATGGGAGCCG
TCGTCAGCGGCGTGGCCATGCTCATGGGCACCGCCATGTTGGCCTTTTTCAGGGCTGCCTTGGTCTGGTGGATTA
TCGAGGACCGTGGCGTGCTGGGCGGCAGCGGCGATGAAGTTTTCGAGAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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