Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|2590
Gene name
LocationContig_231:18778..19777
Strand+
Gene length (bp)999
Transcript length (bp)999
Coding sequence length (bp)999
Protein length (aa) 333

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5R7D0|COX18_PONAB Mitochondrial inner membrane protein COX18 OS=Pongo abelii GN=COX18 PE=2 SV=1 46 278 2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 59 81 22
2 249 271 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|2590
MLHRNLAGLAPLVRARARQAPIRASNAQTAGRRHFHFGQVIASTAQVLSSVHALGVPWYYIIPLVAAGVNFSVRL
PIHLYVSSIDRRRRQLAPLLYAWTIRHSRGHPHQPDALDFARSAASLAKKSRKRIYKTWGVQSWKYFLPLLSTAP
FLVVSQALRGLCGTPTLAFLDAESVRGLFDRSLTDGGCLWFVDLTAQDPYYCLPLLCSALAALNTWSKFSKQDIK
ELFTLNDTLSRAPLKSMKLGLTRLTLFFPMIAIIYAYLPSAIFLYWATTFGLGSVNAALSRWFTPVMDIGIQVMP
PQKTPRFRANLPFLRGSVPRPKPSPKSESPAS*
Coding >Ophun1|2590
ATGCTGCACAGGAATCTCGCAGGCCTTGCTCCTCTCGTCAGAGCTCGAGCTCGGCAAGCACCGATCCGAGCCTCC
AATGCCCAGACAGCCGGACGACGACACTTTCATTTCGGCCAAGTCATCGCATCGACCGCTCAAGTCCTGAGCTCC
GTCCATGCCCTTGGTGTGCCCTGGTACTACATTATACCACTCGTGGCCGCGGGCGTCAACTTCTCCGTCCGACTC
CCCATCCACCTTTACGTCTCCAGCATCGACCGCAGGCGACGACAGCTGGCGCCTCTGCTCTACGCTTGGACCATC
CGGCACTCACGCGGCCATCCGCACCAGCCCGACGCGCTCGATTTCGCCCGTTCTGCTGCCTCGCTCGCCAAAAAG
TCCCGGAAGCGCATCTACAAGACTTGGGGCGTTCAATCGTGGAAATACTTCCTGCCTCTCCTCAGCACTGCTCCC
TTTCTTGTCGTCTCACAGGCTCTGAGGGGCTTGTGTGGCACGCCTACGCTGGCATTTCTGGATGCTGAATCCGTC
AGAGGCCTTTTTGACCGGTCGCTGACTGATGGGGGCTGTCTGTGGTTCGTCGACTTGACTGCTCAGGATCCGTAC
TACTGCCTTCCTTTGTTGTGCTCGGCCTTGGCGGCACTCAACACATGGAGCAAGTTTTCTAAACAAGATATTAAA
GAGCTCTTCACCTTGAACGACACTCTGTCTAGGGCTCCCCTGAAGAGCATGAAGCTCGGTCTGACGCGGCTGACG
TTGTTTTTTCCCATGATCGCCATAATTTACGCCTACCTTCCTTCAGCCATATTCCTTTACTGGGCCACGACTTTT
GGCCTTGGCAGCGTCAACGCTGCTCTGTCCCGATGGTTTACTCCGGTCATGGACATCGGCATACAAGTCATGCCG
CCCCAGAAGACGCCGCGATTCCGCGCAAACTTGCCCTTCCTACGAGGGTCTGTTCCGCGACCCAAGCCTTCACCA
AAGTCAGAGTCACCGGCATCATGA
Transcript >Ophun1|2590
ATGCTGCACAGGAATCTCGCAGGCCTTGCTCCTCTCGTCAGAGCTCGAGCTCGGCAAGCACCGATCCGAGCCTCC
AATGCCCAGACAGCCGGACGACGACACTTTCATTTCGGCCAAGTCATCGCATCGACCGCTCAAGTCCTGAGCTCC
GTCCATGCCCTTGGTGTGCCCTGGTACTACATTATACCACTCGTGGCCGCGGGCGTCAACTTCTCCGTCCGACTC
CCCATCCACCTTTACGTCTCCAGCATCGACCGCAGGCGACGACAGCTGGCGCCTCTGCTCTACGCTTGGACCATC
CGGCACTCACGCGGCCATCCGCACCAGCCCGACGCGCTCGATTTCGCCCGTTCTGCTGCCTCGCTCGCCAAAAAG
TCCCGGAAGCGCATCTACAAGACTTGGGGCGTTCAATCGTGGAAATACTTCCTGCCTCTCCTCAGCACTGCTCCC
TTTCTTGTCGTCTCACAGGCTCTGAGGGGCTTGTGTGGCACGCCTACGCTGGCATTTCTGGATGCTGAATCCGTC
AGAGGCCTTTTTGACCGGTCGCTGACTGATGGGGGCTGTCTGTGGTTCGTCGACTTGACTGCTCAGGATCCGTAC
TACTGCCTTCCTTTGTTGTGCTCGGCCTTGGCGGCACTCAACACATGGAGCAAGTTTTCTAAACAAGATATTAAA
GAGCTCTTCACCTTGAACGACACTCTGTCTAGGGCTCCCCTGAAGAGCATGAAGCTCGGTCTGACGCGGCTGACG
TTGTTTTTTCCCATGATCGCCATAATTTACGCCTACCTTCCTTCAGCCATATTCCTTTACTGGGCCACGACTTTT
GGCCTTGGCAGCGTCAACGCTGCTCTGTCCCGATGGTTTACTCCGGTCATGGACATCGGCATACAAGTCATGCCG
CCCCAGAAGACGCCGCGATTCCGCGCAAACTTGCCCTTCCTACGAGGGTCTGTTCCGCGACCCAAGCCTTCACCA
AAGTCAGAGTCACCGGCATCATGA
Gene >Ophun1|2590
ATGCTGCACAGGAATCTCGCAGGCCTTGCTCCTCTCGTCAGAGCTCGAGCTCGGCAAGCACCGATCCGAGCCTCC
AATGCCCAGACAGCCGGACGACGACACTTTCATTTCGGCCAAGTCATCGCATCGACCGCTCAAGTCCTGAGCTCC
GTCCATGCCCTTGGTGTGCCCTGGTACTACATTATACCACTCGTGGCCGCGGGCGTCAACTTCTCCGTCCGACTC
CCCATCCACCTTTACGTCTCCAGCATCGACCGCAGGCGACGACAGCTGGCGCCTCTGCTCTACGCTTGGACCATC
CGGCACTCACGCGGCCATCCGCACCAGCCCGACGCGCTCGATTTCGCCCGTTCTGCTGCCTCGCTCGCCAAAAAG
TCCCGGAAGCGCATCTACAAGACTTGGGGCGTTCAATCGTGGAAATACTTCCTGCCTCTCCTCAGCACTGCTCCC
TTTCTTGTCGTCTCACAGGCTCTGAGGGGCTTGTGTGGCACGCCTACGCTGGCATTTCTGGATGCTGAATCCGTC
AGAGGCCTTTTTGACCGGTCGCTGACTGATGGGGGCTGTCTGTGGTTCGTCGACTTGACTGCTCAGGATCCGTAC
TACTGCCTTCCTTTGTTGTGCTCGGCCTTGGCGGCACTCAACACATGGAGCAAGTTTTCTAAACAAGATATTAAA
GAGCTCTTCACCTTGAACGACACTCTGTCTAGGGCTCCCCTGAAGAGCATGAAGCTCGGTCTGACGCGGCTGACG
TTGTTTTTTCCCATGATCGCCATAATTTACGCCTACCTTCCTTCAGCCATATTCCTTTACTGGGCCACGACTTTT
GGCCTTGGCAGCGTCAACGCTGCTCTGTCCCGATGGTTTACTCCGGTCATGGACATCGGCATACAAGTCATGCCG
CCCCAGAAGACGCCGCGATTCCGCGCAAACTTGCCCTTCCTACGAGGGTCTGTTCCGCGACCCAAGCCTTCACCA
AAGTCAGAGTCACCGGCATCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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