Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|2578
Gene name
Location	Contig_230:19523..20647
Strand	+
Gene length (bp)	1124
Transcript length (bp)	999
Coding sequence length (bp)	999
Protein length (aa)	333

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11754	Velvet	Velvet factor	1.8E-08	54	112
PF11754	Velvet	Velvet factor	2.0E-33	121	225

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 52	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|2578 MAGHPGSYMDMPFLQPSRQPAAGIPYLAAGELPLPAEETSPPQNTESYGDPQRQLTLRQAPMHARVAIGKEKDRK PIDPPPIVQLLDRRHHGKSGLYDSPYLFMTSSLVPETYGEGEGKDQELPSNYLVGSLVSSIHRLRDTDNVEGGFF VFGDLSVKREGRFRLRFTLFERDQHSSAPSFYFVSELITNAFTVYSTKLFPGMADSTPLTRTFSNQGVKVRLRKD SSGMAARKRNRGVADVCADDFLDRQTKRSSYDRDLPLANYAVSDLSHLGVMTSAPPSGYLVAGSDVMPSPVPAPI PPPPPPPPPPRNAGLGMPLSTSGYYFTGGPYF*
Coding	>Ophun1\|2578 ATGGCTGGCCATCCGGGGAGCTACATGGACATGCCCTTCCTGCAGCCCAGTCGCCAGCCCGCTGCTGGTATCCCC TATCTGGCCGCCGGCGAGCTGCCTCTGCCGGCCGAGGAGACGAGCCCGCCGCAGAATACAGAGTCTTACGGCGAC CCTCAGCGGCAGCTGACGCTGAGGCAGGCACCTATGCATGCCCGGGTGGCGATAGGCAAGGAAAAGGATCGCAAG CCCATCGATCCGCCGCCCATCGTCCAGCTGCTGGATAGACGACACCATGGGAAGAGCGGCCTCTACGACAGTCCT TACCTGTTCATGACATCGTCGCTCGTCCCCGAGACGTACGGCGAGGGAGAGGGTAAGGATCAGGAACTGCCTTCC AACTACCTCGTCGGCTCTCTGGTCTCGTCCATCCACCGGCTCCGGGACACGGACAACGTCGAGGGAGGCTTCTTC GTCTTCGGGGACCTGTCGGTCAAGCGCGAGGGCCGCTTCCGCCTTCGCTTCACTCTTTTCGAGCGCGACCAGCAC AGCTCGGCTCCGAGCTTCTACTTCGTCTCGGAGCTCATCACCAACGCCTTTACCGTCTACTCGACCAAGCTCTTC CCCGGAATGGCCGACTCGACGCCGCTGACGCGAACCTTTAGCAACCAGGGCGTCAAGGTCCGTCTCCGAAAGGAC TCGAGCGGCATGGCGGCCCGGAAGCGCAACAGGGGCGTTGCCGACGTCTGTGCCGATGACTTTCTCGACCGCCAG ACGAAGCGATCCTCTTACGACCGCGATCTTCCTCTCGCCAACTACGCCGTCTCGGACCTGAGTCACCTGGGCGTC ATGACTTCGGCGCCGCCAAGCGGTTATCTCGTCGCCGGCTCCGATGTTATGCCTTCGCCCGTACCGGCTCCGATT CCGCCTCCGCCGCCTCCGCCTCCGCCGCCGAGGAACGCGGGGCTCGGGATGCCGTTGTCGACGAGCGGCTATTAC TTTACCGGCGGTCCTTACTTTTAG
Transcript	>Ophun1\|2578 ATGGCTGGCCATCCGGGGAGCTACATGGACATGCCCTTCCTGCAGCCCAGTCGCCAGCCCGCTGCTGGTATCCCC TATCTGGCCGCCGGCGAGCTGCCTCTGCCGGCCGAGGAGACGAGCCCGCCGCAGAATACAGAGTCTTACGGCGAC CCTCAGCGGCAGCTGACGCTGAGGCAGGCACCTATGCATGCCCGGGTGGCGATAGGCAAGGAAAAGGATCGCAAG CCCATCGATCCGCCGCCCATCGTCCAGCTGCTGGATAGACGACACCATGGGAAGAGCGGCCTCTACGACAGTCCT TACCTGTTCATGACATCGTCGCTCGTCCCCGAGACGTACGGCGAGGGAGAGGGTAAGGATCAGGAACTGCCTTCC AACTACCTCGTCGGCTCTCTGGTCTCGTCCATCCACCGGCTCCGGGACACGGACAACGTCGAGGGAGGCTTCTTC GTCTTCGGGGACCTGTCGGTCAAGCGCGAGGGCCGCTTCCGCCTTCGCTTCACTCTTTTCGAGCGCGACCAGCAC AGCTCGGCTCCGAGCTTCTACTTCGTCTCGGAGCTCATCACCAACGCCTTTACCGTCTACTCGACCAAGCTCTTC CCCGGAATGGCCGACTCGACGCCGCTGACGCGAACCTTTAGCAACCAGGGCGTCAAGGTCCGTCTCCGAAAGGAC TCGAGCGGCATGGCGGCCCGGAAGCGCAACAGGGGCGTTGCCGACGTCTGTGCCGATGACTTTCTCGACCGCCAG ACGAAGCGATCCTCTTACGACCGCGATCTTCCTCTCGCCAACTACGCCGTCTCGGACCTGAGTCACCTGGGCGTC ATGACTTCGGCGCCGCCAAGCGGTTATCTCGTCGCCGGCTCCGATGTTATGCCTTCGCCCGTACCGGCTCCGATT CCGCCTCCGCCGCCTCCGCCTCCGCCGCCGAGGAACGCGGGGCTCGGGATGCCGTTGTCGACGAGCGGCTATTAC TTTACCGGCGGTCCTTACTTTTAG
Gene	>Ophun1\|2578 ATGGCTGGCCATCCGGGGAGCTACATGGACATGCCCTTCCTGCAGCCCAGTCGCCAGCCCGCTGCTGGTATCCCC TATCTGGCCGCCGGCGAGCTGCCTCTGCCGGCCGAGGAGACGAGCCCGCCGCAGAATACAGAGTCTTACGGCGAC CCTCAGCGGCAGCTGACGCTGAGGCAGGCACCTATGCATGCCCGGGTGGCGATAGGCAAGGAAAAGGGTAGGCCA AAGCGTCGCCCGTCGTCGACATTGCCTACCTTGGCTTGTGCTGACCGGCCTCGCAGATCGCAAGCCCATCGATCC GCCGCCCATCGTCCAGCTGCTGGATAGACGACACCATGGGAAGAGCGGCCTCTACGACAGTGAGTAAAACCAAAC GAGTCCCTGATGACCGACGCCCCCCTTTCTCACGACATAATCAAGGTCCTTACCTGTTCATGACATCGTCGCTCG TCCCCGAGACGTACGGCGAGGGAGAGGGTAAGGATCAGGAACTGCCTTCCAACTACCTCGTCGGCTCTCTGGTCT CGTCCATCCACCGGCTCCGGGACACGGACAACGTCGAGGGAGGCTTCTTCGTCTTCGGGGACCTGTCGGTCAAGC GCGAGGGCCGCTTCCGCCTTCGCTTCACTCTTTTCGAGCGCGACCAGCACAGCTCGGCTCCGAGCTTCTACTTCG TCTCGGAGCTCATCACCAACGCCTTTACCGTCTACTCGACCAAGCTCTTCCCCGGAATGGCCGACTCGACGCCGC TGACGCGAACCTTTAGCAACCAGGGCGTCAAGGTCCGTCTCCGAAAGGACTCGAGCGGCATGGCGGCCCGGAAGC GCAACAGGGGCGTTGCCGACGTCTGTGCCGATGACTTTCTCGACCGCCAGACGAAGCGATCCTCTTACGACCGCG ATCTTCCTCTCGCCAACTACGCCGTCTCGGACCTGAGTCACCTGGGCGTCATGACTTCGGCGCCGCCAAGCGGTT ATCTCGTCGCCGGCTCCGATGTTATGCCTTCGCCCGTACCGGCTCCGATTCCGCCTCCGCCGCCTCCGCCTCCGC CGCCGAGGAACGCGGGGCTCGGGATGCCGTTGTCGACGAGCGGCTATTACTTTACCGGCGGTCCTTACTTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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